RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 SLC5A1P13866 664 aa16.46■□□□□ 0.23
COPS7B-223ENST00000611614 FOXD4L6Q3SYB3 417 aaPredicted RBP16.46■□□□□ 0.23
COPS7B-223ENST00000611614 FOXD4L3Q6VB84 417 aaPredicted RBP16.46■□□□□ 0.23
COPS7B-223ENST00000611614 HELBQ8NG08 1087 aaPredicted RBP16.46■□□□□ 0.23
COPS7B-223ENST00000611614 EDC3Q96F86 508 aaKnown RBP16.46■□□□□ 0.23
COPS7B-223ENST00000611614 HMG20BQ9P0W2 317 aa16.46■□□□□ 0.23
COPS7B-223ENST00000611614 LAMB2P55268 1798 aa16.46■□□□□ 0.22
COPS7B-223ENST00000611614 RIC1Q4ADV7 1423 aa16.46■□□□□ 0.22
COPS7B-223ENST00000611614 GJB2P29033 226 aa16.45■□□□□ 0.22
COPS7B-223ENST00000611614 C3orf67Q6ZVT6 689 aa16.45■□□□□ 0.22
COPS7B-223ENST00000611614 ZNF589Q86UQ0 364 aaPredicted RBP16.45■□□□□ 0.22
COPS7B-223ENST00000611614 VGLL2Q8N8G2 317 aa16.45■□□□□ 0.22
COPS7B-223ENST00000611614 ALDH8A1Q9H2A2 487 aaPredicted RBP16.45■□□□□ 0.22
COPS7B-223ENST00000611614 TAF5LO75529 589 aa16.45■□□□□ 0.22
COPS7B-223ENST00000611614 F13A1P00488 732 aa16.45■□□□□ 0.22
COPS7B-223ENST00000611614 ME3Q16798 604 aa16.45■□□□□ 0.22
COPS7B-223ENST00000611614 TSGA10IPQ3SY00 556 aa16.45■□□□□ 0.22
COPS7B-223ENST00000611614 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.45■□□□□ 0.22
COPS7B-223ENST00000611614 GDPD2Q9HCC8 539 aa16.45■□□□□ 0.22
COPS7B-223ENST00000611614 BSDC1Q9NW68 430 aaPredicted RBP16.45■□□□□ 0.22
COPS7B-223ENST00000611614 ATP6V1DQ9Y5K8 247 aa16.45■□□□□ 0.22
COPS7B-223ENST00000611614 GADD45BO75293 160 aaPredicted RBP16.44■□□□□ 0.22
COPS7B-223ENST00000611614 PDIA4P13667 645 aaKnown RBP16.44■□□□□ 0.22
COPS7B-223ENST00000611614 TM4SF1P30408 202 aa16.44■□□□□ 0.22
COPS7B-223ENST00000611614 ADORA1P30542 326 aa16.44■□□□□ 0.22
COPS7B-223ENST00000611614 RPS8P62241 208 aaKnown RBP16.44■□□□□ 0.22
COPS7B-223ENST00000611614 EN1Q05925 392 aaPredicted RBP16.44■□□□□ 0.22
COPS7B-223ENST00000611614 PAG1Q9NWQ8 432 aa16.44■□□□□ 0.22
COPS7B-223ENST00000611614 BAG6P46379 1132 aa16.44■□□□□ 0.22
COPS7B-223ENST00000611614 ANKRD1Q15327 319 aa16.44■□□□□ 0.22
COPS7B-223ENST00000611614 LRRFIP1Q32MZ4 808 aaKnown RBP16.44■□□□□ 0.22
COPS7B-223ENST00000611614 PRR5LQ6MZQ0 368 aa16.44■□□□□ 0.22
COPS7B-223ENST00000611614 BLOC1S2Q6QNY1 142 aa16.44■□□□□ 0.22
COPS7B-223ENST00000611614 COL23A1Q86Y22 540 aaPredicted RBP16.44■□□□□ 0.22
COPS7B-223ENST00000611614 COL24A1Q17RW2 1714 aa16.44■□□□□ 0.22
COPS7B-223ENST00000611614 GOLIM4O00461 696 aa16.43■□□□□ 0.22
COPS7B-223ENST00000611614 FKBP4Q02790 459 aaKnown RBP eCLIP16.43■□□□□ 0.22
COPS7B-223ENST00000611614 CHRNDQ07001 517 aa16.43■□□□□ 0.22
COPS7B-223ENST00000611614 ST3GAL1Q11201 340 aa16.43■□□□□ 0.22
COPS7B-223ENST00000611614 TPCN1Q9ULQ1 816 aa16.43■□□□□ 0.22
COPS7B-223ENST00000611614 RPS6KB1P23443 525 aa16.43■□□□□ 0.22
COPS7B-223ENST00000611614 CNPY2Q9Y2B0 182 aa16.43■□□□□ 0.22
COPS7B-223ENST00000611614 EZH2Q15910 746 aaKnown RBP16.42■□□□□ 0.22
COPS7B-223ENST00000611614 KBTBD3Q8NAB2 608 aa16.42■□□□□ 0.22
COPS7B-223ENST00000611614 RPGRQ92834 1020 aaKnown RBP16.42■□□□□ 0.22
COPS7B-223ENST00000611614 STK32BQ9NY57 414 aa16.42■□□□□ 0.22
COPS7B-223ENST00000611614 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.42■□□□□ 0.22
COPS7B-223ENST00000611614 MTMR6Q9Y217 621 aa16.42■□□□□ 0.22
COPS7B-223ENST00000611614 UQCRFS1P1P0C7P4 283 aa16.42■□□□□ 0.22
COPS7B-223ENST00000611614 KRT32Q14532 448 aa16.42■□□□□ 0.22
COPS7B-223ENST00000611614 TICAM2Q86XR7 235 aa16.42■□□□□ 0.22
COPS7B-223ENST00000611614 HOMEZQ8IX15 550 aa16.42■□□□□ 0.22
COPS7B-223ENST00000611614 CELF1Q92879 486 aaKnown RBP16.42■□□□□ 0.22
COPS7B-223ENST00000611614 NDUFB9Q9Y6M9 179 aa16.42■□□□□ 0.22
COPS7B-223ENST00000611614 NECAB1Q8N987 351 aa16.41■□□□□ 0.22
COPS7B-223ENST00000611614 CAMKK2Q96RR4 588 aa16.41■□□□□ 0.22
COPS7B-223ENST00000611614 LRP5O75197 1615 aa16.41■□□□□ 0.22
COPS7B-223ENST00000611614 FGFR2P21802 821 aa16.41■□□□□ 0.22
COPS7B-223ENST00000611614 ZNF512BQ96KM6 892 aaPredicted RBP16.41■□□□□ 0.22
COPS7B-223ENST00000611614 TSPY26PQ9H489 355 aa16.41■□□□□ 0.22
COPS7B-223ENST00000611614 TAF6LQ9Y6J9 622 aa16.41■□□□□ 0.22
COPS7B-223ENST00000611614 U3KPZ7 1027 aaPredicted RBP16.41■□□□□ 0.22
COPS7B-223ENST00000611614 TNS1Q9HBL0 1735 aaKnown RBP16.4■□□□□ 0.22
COPS7B-223ENST00000611614 POLRMTO00411 1230 aaKnown RBP16.4■□□□□ 0.22
COPS7B-223ENST00000611614 MCMDC2Q4G0Z9 681 aa16.4■□□□□ 0.22
COPS7B-223ENST00000611614 CCDC102BQ68D86 513 aa16.4■□□□□ 0.22
COPS7B-223ENST00000611614 MTERF4Q7Z6M4 381 aaKnown RBP16.4■□□□□ 0.22
COPS7B-223ENST00000611614 ANKRD2Q9GZV1 360 aa16.4■□□□□ 0.22
COPS7B-223ENST00000611614 MINPP1Q9UNW1 487 aa16.4■□□□□ 0.22
COPS7B-223ENST00000611614 COL9A3Q14050 684 aaPredicted RBP16.4■□□□□ 0.22
COPS7B-223ENST00000611614 UBE2HP62256 183 aa16.39■□□□□ 0.21
COPS7B-223ENST00000611614 DDR1Q08345 913 aa16.39■□□□□ 0.21
COPS7B-223ENST00000611614 TOB2Q14106 344 aaPredicted RBP16.39■□□□□ 0.21
COPS7B-223ENST00000611614 SLC15A2Q16348 729 aa16.39■□□□□ 0.21
COPS7B-223ENST00000611614 R3HCC1Q9Y3T6 440 aaKnown RBP16.39■□□□□ 0.21
COPS7B-223ENST00000611614 PARP3Q9Y6F1 533 aa16.39■□□□□ 0.21
COPS7B-223ENST00000611614 TCHHQ07283 1943 aa16.39■□□□□ 0.21
COPS7B-223ENST00000611614 RGPD3A6NKT7 1758 aaPredicted RBP16.39■□□□□ 0.21
COPS7B-223ENST00000611614 RGPD4Q7Z3J3 1758 aa16.39■□□□□ 0.21
COPS7B-223ENST00000611614 PNPLA7Q6ZV29 1317 aa16.39■□□□□ 0.21
COPS7B-223ENST00000611614 UBE4AQ14139 1066 aa16.39■□□□□ 0.21
COPS7B-223ENST00000611614 UVSSAQ2YD98 709 aa16.39■□□□□ 0.21
COPS7B-223ENST00000611614 FAM184AQ8NB25 1140 aa16.39■□□□□ 0.21
COPS7B-223ENST00000611614 GRAPQ13588 217 aa16.38■□□□□ 0.21
COPS7B-223ENST00000611614 TTF1Q15361 905 aaPredicted RBP16.38■□□□□ 0.21
COPS7B-223ENST00000611614 GRAPLQ8TC17 118 aaPredicted RBP16.38■□□□□ 0.21
COPS7B-223ENST00000611614 RBM17Q96I25 401 aaKnown RBP16.38■□□□□ 0.21
COPS7B-223ENST00000611614 DYNC1I1O14576 645 aa16.38■□□□□ 0.21
COPS7B-223ENST00000611614 PHKA1P46020 1223 aa16.38■□□□□ 0.21
COPS7B-223ENST00000611614 CCDC129Q6ZRS4 1044 aa16.38■□□□□ 0.21
COPS7B-223ENST00000611614 VPS37DQ86XT2 251 aa16.38■□□□□ 0.21
COPS7B-223ENST00000611614 TCEANC2Q96MN5 208 aa16.38■□□□□ 0.21
COPS7B-223ENST00000611614 SEC62Q99442 399 aaKnown RBP16.38■□□□□ 0.21
COPS7B-223ENST00000611614 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.38■□□□□ 0.21
COPS7B-223ENST00000611614 GNL3LQ9NVN8 582 aaKnown RBP16.38■□□□□ 0.21
COPS7B-223ENST00000611614 VPS37CA5D8V6 355 aaPredicted RBP16.37■□□□□ 0.21
COPS7B-223ENST00000611614 PDCP20941 246 aa16.37■□□□□ 0.21
COPS7B-223ENST00000611614 ZAP70P43403 619 aa16.37■□□□□ 0.21
COPS7B-223ENST00000611614 CAVIN4Q5BKX8 364 aa16.37■□□□□ 0.21
COPS7B-223ENST00000611614 CCDC183Q5T5S1 534 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms