RNA–Protein interactions for RNA: ENST00000602171.5

FARP1-239, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-239ENST00000602171 NCAPD2Q15021 1401 aa9.78□□□□□ -0.84
FARP1-239ENST00000602171 RGPD5Q99666 1765 aa9.78□□□□□ -0.84
FARP1-239ENST00000602171 A0A1B0GTH6 734 aa9.77□□□□□ -0.85
FARP1-239ENST00000602171 LBRQ14739 615 aaKnown RBP9.77□□□□□ -0.85
FARP1-239ENST00000602171 SUZ12Q15022 739 aaKnown RBP9.77□□□□□ -0.85
FARP1-239ENST00000602171 GNASQ5JWF2 1037 aa9.77□□□□□ -0.85
FARP1-239ENST00000602171 PODNQ7Z5L7 613 aa9.77□□□□□ -0.85
FARP1-239ENST00000602171 NEDD1Q8NHV4 660 aa9.77□□□□□ -0.85
FARP1-239ENST00000602171 ZCRB1Q8TBF4 217 aaKnown RBP9.77□□□□□ -0.85
FARP1-239ENST00000602171 XAGE2Q96GT9 111 aa9.77□□□□□ -0.85
FARP1-239ENST00000602171 CFHR5Q9BXR6 569 aa9.77□□□□□ -0.85
FARP1-239ENST00000602171 GLI3P10071 1580 aa9.76□□□□□ -0.85
FARP1-239ENST00000602171 OVOS2A0A0G2JMS6 1433 aa9.76□□□□□ -0.85
FARP1-239ENST00000602171 DISP2A7MBM2 1401 aa9.76□□□□□ -0.85
FARP1-239ENST00000602171 IL2RAP01589 272 aa9.76□□□□□ -0.85
FARP1-239ENST00000602171 MAP2K3P46734 347 aa9.76□□□□□ -0.85
FARP1-239ENST00000602171 GAS2L2Q8NHY3 880 aa9.76□□□□□ -0.85
FARP1-239ENST00000602171 RAB6BQ9NRW1 208 aa9.76□□□□□ -0.85
FARP1-239ENST00000602171 PCDH11XQ9BZA7 1347 aa9.76□□□□□ -0.85
FARP1-239ENST00000602171 PCDH11YQ9BZA8 1340 aa9.76□□□□□ -0.85
FARP1-239ENST00000602171 MAPK8IP3Q9UPT6 1336 aa9.76□□□□□ -0.85
FARP1-239ENST00000602171 HSP90AB1P08238 724 aaKnown RBP9.75□□□□□ -0.85
FARP1-239ENST00000602171 PRKAR2BP31323 418 aa9.75□□□□□ -0.85
FARP1-239ENST00000602171 SLFNL1Q499Z3 407 aa9.75□□□□□ -0.85
FARP1-239ENST00000602171 C1orf141Q5JVX7 400 aa9.75□□□□□ -0.85
FARP1-239ENST00000602171 TMEM214Q6NUQ4 689 aaKnown RBP9.75□□□□□ -0.85
FARP1-239ENST00000602171 KRT27Q7Z3Y8 459 aa9.75□□□□□ -0.85
FARP1-239ENST00000602171 AEBP1Q8IUX7 1158 aa9.75□□□□□ -0.85
FARP1-239ENST00000602171 PNISRQ8TF01 805 aaKnown RBP9.75□□□□□ -0.85
FARP1-239ENST00000602171 CCDC85AQ96PX6 553 aaPredicted RBP9.75□□□□□ -0.85
FARP1-239ENST00000602171 TNS2Q63HR2 1409 aa9.74□□□□□ -0.85
FARP1-239ENST00000602171 MEGF6O75095 1541 aa9.74□□□□□ -0.85
FARP1-239ENST00000602171 GPAT2Q6NUI2 795 aa9.74□□□□□ -0.85
FARP1-239ENST00000602171 IFNL2Q8IZJ0 200 aa9.74□□□□□ -0.85
FARP1-239ENST00000602171 DDX54Q8TDD1 881 aaKnown RBP9.74□□□□□ -0.85
FARP1-239ENST00000602171 ACDQ96AP0 544 aa9.74□□□□□ -0.85
FARP1-239ENST00000602171 RUNDC1Q96C34 613 aa9.74□□□□□ -0.85
FARP1-239ENST00000602171 HRH3Q9Y5N1 445 aa9.74□□□□□ -0.85
FARP1-239ENST00000602171 RGPD1P0DJD0 1748 aa9.73□□□□□ -0.85
FARP1-239ENST00000602171 AKAP4Q5JQC9 854 aa9.73□□□□□ -0.85
FARP1-239ENST00000602171 ZNF530Q6P9A1 599 aaPredicted RBP9.73□□□□□ -0.85
FARP1-239ENST00000602171 FAM196AQ6ZSG2 479 aa9.73□□□□□ -0.85
FARP1-239ENST00000602171 PGBD3Q8N328 593 aa9.73□□□□□ -0.85
FARP1-239ENST00000602171 DOLKQ9UPQ8 538 aa9.73□□□□□ -0.85
FARP1-239ENST00000602171 PARP4Q9UKK3 1724 aaKnown RBP9.73□□□□□ -0.85
FARP1-239ENST00000602171 RGS12O14924 1447 aa9.73□□□□□ -0.85
FARP1-239ENST00000602171 THSD7AQ9UPZ6 1657 aa9.72□□□□□ -0.85
FARP1-239ENST00000602171 LMOD3Q0VAK6 560 aa9.72□□□□□ -0.85
FARP1-239ENST00000602171 CCDC184Q52MB2 194 aa9.72□□□□□ -0.85
FARP1-239ENST00000602171 FAM9BQ8IZU0 186 aa9.72□□□□□ -0.85
FARP1-239ENST00000602171 PLEKHF1Q96S99 279 aa9.72□□□□□ -0.85
FARP1-239ENST00000602171 TBC1D2BQ9UPU7 963 aa9.72□□□□□ -0.85
FARP1-239ENST00000602171 LOC100996750A0A140TA64 210 aa9.71□□□□□ -0.86
FARP1-239ENST00000602171 PHKG2P15735 406 aa9.71□□□□□ -0.86
FARP1-239ENST00000602171 MTHFSDQ2M296 383 aaKnown RBP9.71□□□□□ -0.86
FARP1-239ENST00000602171 RNF135Q8IUD6 432 aa9.71□□□□□ -0.86
FARP1-239ENST00000602171 PHTF2Q8N3S3 785 aa9.71□□□□□ -0.86
FARP1-239ENST00000602171 RTF1Q92541 710 aaKnown RBP9.71□□□□□ -0.86
FARP1-239ENST00000602171 DCAF5Q96JK2 942 aa9.71□□□□□ -0.86
FARP1-239ENST00000602171 OXCT2Q9BYC2 517 aaPredicted RBP9.71□□□□□ -0.86
FARP1-239ENST00000602171 KRTAP4-6Q9BYQ5 205 aa9.71□□□□□ -0.86
FARP1-239ENST00000602171 FHDC1Q9C0D6 1143 aaPredicted RBP9.71□□□□□ -0.86
FARP1-239ENST00000602171 GNAT3A8MTJ3 354 aa9.7□□□□□ -0.86
FARP1-239ENST00000602171 CYP27B1O15528 508 aa9.7□□□□□ -0.86
FARP1-239ENST00000602171 OIP5O43482 229 aa9.7□□□□□ -0.86
FARP1-239ENST00000602171 HTATSF1O43719 755 aaKnown RBP9.7□□□□□ -0.86
FARP1-239ENST00000602171 PHKA2P46019 1235 aa9.7□□□□□ -0.86
FARP1-239ENST00000602171 NFE2L2Q16236 605 aa9.7□□□□□ -0.86
FARP1-239ENST00000602171 EFHC2Q5JST6 749 aa9.7□□□□□ -0.86
FARP1-239ENST00000602171 NGEFQ8N5V2 710 aa9.7□□□□□ -0.86
FARP1-239ENST00000602171 MARCH10Q8NA82 808 aaPredicted RBP9.7□□□□□ -0.86
FARP1-239ENST00000602171 PHACTR3Q96KR7 559 aa9.7□□□□□ -0.86
FARP1-239ENST00000602171 GPAMQ9HCL2 828 aa9.7□□□□□ -0.86
FARP1-239ENST00000602171 BCL9O00512 1426 aa9.7□□□□□ -0.86
FARP1-239ENST00000602171 RGPD2P0DJD1 1756 aa9.7□□□□□ -0.86
FARP1-239ENST00000602171 LRRC37A3O60309 1634 aa9.69□□□□□ -0.86
FARP1-239ENST00000602171 WASHC4Q2M389 1173 aa9.69□□□□□ -0.86
FARP1-239ENST00000602171 CCDC146Q8IYE0 955 aa9.69□□□□□ -0.86
FARP1-239ENST00000602171 RHBDD1Q8TEB9 315 aa9.69□□□□□ -0.86
FARP1-239ENST00000602171 CNTNAP5Q8WYK1 1306 aa9.69□□□□□ -0.86
FARP1-239ENST00000602171 WNK3Q9BYP7 1800 aa9.69□□□□□ -0.86
FARP1-239ENST00000602171 GDF2Q9UK05 429 aaPredicted RBP9.69□□□□□ -0.86
FARP1-239ENST00000602171 MAP3K5Q99683 1374 aa9.68□□□□□ -0.86
FARP1-239ENST00000602171 ERVV-2B6SEH9 535 aa9.68□□□□□ -0.86
FARP1-239ENST00000602171 TMPOP42166 694 aaKnown RBP9.68□□□□□ -0.86
FARP1-239ENST00000602171 RIPK4P57078 832 aa9.68□□□□□ -0.86
FARP1-239ENST00000602171 SF3B2Q13435 895 aaKnown RBP9.68□□□□□ -0.86
FARP1-239ENST00000602171 MAP7D1Q3KQU3 841 aa9.68□□□□□ -0.86
FARP1-239ENST00000602171 C4orf17Q53FE4 359 aa9.68□□□□□ -0.86
FARP1-239ENST00000602171 PKD1L3Q7Z443 1732 aa9.68□□□□□ -0.86
FARP1-239ENST00000602171 CALD1Q05682 793 aaKnown RBP9.67□□□□□ -0.86
FARP1-239ENST00000602171 IRF5Q13568 498 aa9.67□□□□□ -0.86
FARP1-239ENST00000602171 SYTL4Q96C24 671 aaPredicted RBP9.67□□□□□ -0.86
FARP1-239ENST00000602171 ATXN7L1Q9ULK2 861 aaPredicted RBP9.67□□□□□ -0.86
FARP1-239ENST00000602171 APAF1O14727 1248 aa9.66□□□□□ -0.86
FARP1-239ENST00000602171 RNMTO43148 476 aaKnown RBP9.66□□□□□ -0.86
FARP1-239ENST00000602171 HMGB2P26583 209 aaKnown RBP9.66□□□□□ -0.86
FARP1-239ENST00000602171 MSX1P28360 303 aa9.66□□□□□ -0.86
FARP1-239ENST00000602171 SOX11P35716 441 aa9.66□□□□□ -0.86
FARP1-239ENST00000602171 CABP4P57796 275 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms