RNA–Protein interactions for RNA: ENST00000599846.5

ARHGEF1-219, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF1, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-219ENST00000599846 HOMER1Q86YM7 354 aa18.43■□□□□ 0.54
ARHGEF1-219ENST00000599846 SH3TC1Q8TE82 1336 aa18.43■□□□□ 0.54
ARHGEF1-219ENST00000599846 NRDCO43847 1150 aa18.42■□□□□ 0.54
ARHGEF1-219ENST00000599846 LMOD1P29536 600 aaPredicted RBP18.42■□□□□ 0.54
ARHGEF1-219ENST00000599846 LDHAL6AQ6ZMR3 332 aa18.42■□□□□ 0.54
ARHGEF1-219ENST00000599846 SPTLC2O15270 562 aa18.42■□□□□ 0.54
ARHGEF1-219ENST00000599846 RRP12Q5JTH9 1297 aaKnown RBP18.42■□□□□ 0.54
ARHGEF1-219ENST00000599846 CHMP4CQ96CF2 233 aa18.42■□□□□ 0.54
ARHGEF1-219ENST00000599846 CARMIL3Q8ND23 1372 aa18.42■□□□□ 0.54
ARHGEF1-219ENST00000599846 IQCB1Q15051 598 aa18.41■□□□□ 0.54
ARHGEF1-219ENST00000599846 SYNE4Q8N205 404 aa18.41■□□□□ 0.54
ARHGEF1-219ENST00000599846 NCOA7Q8NI08 942 aa18.41■□□□□ 0.54
ARHGEF1-219ENST00000599846 IFNKQ9P0W0 207 aa18.41■□□□□ 0.54
ARHGEF1-219ENST00000599846 ADD1P35611 737 aaKnown RBP18.41■□□□□ 0.54
ARHGEF1-219ENST00000599846 EXOSC10Q01780 885 aaKnown RBP18.41■□□□□ 0.54
ARHGEF1-219ENST00000599846 SCARF1Q14162 830 aa18.41■□□□□ 0.54
ARHGEF1-219ENST00000599846 AKAP2Q9Y2D5 859 aa18.41■□□□□ 0.54
ARHGEF1-219ENST00000599846 SMTNL1A8MU46 457 aa18.41■□□□□ 0.54
ARHGEF1-219ENST00000599846 DPCR1Q3MIW9 517 aa18.41■□□□□ 0.54
ARHGEF1-219ENST00000599846 AIFM3Q96NN9 605 aa18.41■□□□□ 0.54
ARHGEF1-219ENST00000599846 PUS7LQ9H0K6 701 aaKnown RBP18.41■□□□□ 0.54
ARHGEF1-219ENST00000599846 SLC9C2Q5TAH2 1124 aa18.4■□□□□ 0.54
ARHGEF1-219ENST00000599846 CCDC191Q8NCU4 936 aa18.4■□□□□ 0.54
ARHGEF1-219ENST00000599846 ZNF274Q96GC6 653 aaPredicted RBP18.4■□□□□ 0.54
ARHGEF1-219ENST00000599846 GTF2F1P35269 517 aaKnown RBP eCLIP18.4■□□□□ 0.549e-7■■■■■ 27.5
ARHGEF1-219ENST00000599846 CPLX2Q6PUV4 134 aaKnown RBP18.4■□□□□ 0.54
ARHGEF1-219ENST00000599846 KIF6Q6ZMV9 814 aa18.4■□□□□ 0.54
ARHGEF1-219ENST00000599846 HELBQ8NG08 1087 aaPredicted RBP18.4■□□□□ 0.54
ARHGEF1-219ENST00000599846 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.4■□□□□ 0.54
ARHGEF1-219ENST00000599846 GPAA1O43292 621 aa18.39■□□□□ 0.54
ARHGEF1-219ENST00000599846 SNW1Q13573 536 aaKnown RBP18.39■□□□□ 0.54
ARHGEF1-219ENST00000599846 PTPN21Q16825 1174 aa18.39■□□□□ 0.54
ARHGEF1-219ENST00000599846 LRP10Q7Z4F1 713 aa18.39■□□□□ 0.54
ARHGEF1-219ENST00000599846 MEGF6O75095 1541 aa18.39■□□□□ 0.53
ARHGEF1-219ENST00000599846 TRIM29Q14134 588 aa18.39■□□□□ 0.53
ARHGEF1-219ENST00000599846 RBM43Q6ZSC3 357 aaKnown RBP18.39■□□□□ 0.53
ARHGEF1-219ENST00000599846 FAM177A1Q8N128 213 aaPredicted RBP18.39■□□□□ 0.53
ARHGEF1-219ENST00000599846 PHKBQ93100 1093 aa18.39■□□□□ 0.53
ARHGEF1-219ENST00000599846 MYL10Q9BUA6 226 aa18.39■□□□□ 0.53
ARHGEF1-219ENST00000599846 PAXBP1Q9Y5B6 917 aa18.39■□□□□ 0.53
ARHGEF1-219ENST00000599846 SERPINC1P01008 464 aa18.39■□□□□ 0.53
ARHGEF1-219ENST00000599846 FDPSP14324 419 aaKnown RBP18.39■□□□□ 0.53
ARHGEF1-219ENST00000599846 CASP7P55210 303 aa18.39■□□□□ 0.53
ARHGEF1-219ENST00000599846 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.38■□□□□ 0.535e-7■■■■□ 19.7
ARHGEF1-219ENST00000599846 SFPQP23246 707 aaKnown RBP eCLIP18.38■□□□□ 0.53
ARHGEF1-219ENST00000599846 ADALQ6DHV7 355 aa18.38■□□□□ 0.53
ARHGEF1-219ENST00000599846 KCNG4Q8TDN1 519 aa18.38■□□□□ 0.53
ARHGEF1-219ENST00000599846 ALG1Q9BT22 464 aa18.38■□□□□ 0.53
ARHGEF1-219ENST00000599846 MED1Q15648 1581 aaPredicted RBP18.38■□□□□ 0.53
ARHGEF1-219ENST00000599846 ZNF202O95125 648 aa18.38■□□□□ 0.53
ARHGEF1-219ENST00000599846 DENND2AQ9ULE3 1009 aa18.38■□□□□ 0.53
ARHGEF1-219ENST00000599846 MYSM1Q5VVJ2 828 aa18.37■□□□□ 0.53
ARHGEF1-219ENST00000599846 XPO4Q9C0E2 1151 aaKnown RBP18.37■□□□□ 0.53
ARHGEF1-219ENST00000599846 KIAA1468Q9P260 1216 aa18.37■□□□□ 0.53
ARHGEF1-219ENST00000599846 METAP2P50579 478 aaKnown RBP eCLIP18.37■□□□□ 0.53
ARHGEF1-219ENST00000599846 SMAP1Q8IYB5 467 aaPredicted RBP18.37■□□□□ 0.53
ARHGEF1-219ENST00000599846 LINC00301Q8NCQ3 95 aa18.37■□□□□ 0.53
ARHGEF1-219ENST00000599846 FBXO18Q8NFZ0 1043 aa18.37■□□□□ 0.53
ARHGEF1-219ENST00000599846 MRFAP1L1Q96HT8 127 aa18.37■□□□□ 0.53
ARHGEF1-219ENST00000599846 KDM3BQ7LBC6 1761 aa18.37■□□□□ 0.53
ARHGEF1-219ENST00000599846 NCBP1Q09161 790 aaKnown RBP18.36■□□□□ 0.53
ARHGEF1-219ENST00000599846 DHX40Q8IX18 779 aaKnown RBP18.36■□□□□ 0.53
ARHGEF1-219ENST00000599846 KIF18AQ8NI77 898 aa18.36■□□□□ 0.53
ARHGEF1-219ENST00000599846 TMOD3Q9NYL9 352 aa18.36■□□□□ 0.53
ARHGEF1-219ENST00000599846 FER1L4A9Z1Z3 1794 aa18.36■□□□□ 0.53
ARHGEF1-219ENST00000599846 B4E1Z4 1266 aa18.36■□□□□ 0.53
ARHGEF1-219ENST00000599846 CFAP100Q494V2 611 aa18.36■□□□□ 0.53
ARHGEF1-219ENST00000599846 SPECC1Q5M775 1068 aa18.36■□□□□ 0.53
ARHGEF1-219ENST00000599846 ILDR1Q86SU0 546 aaPredicted RBP18.36■□□□□ 0.53
ARHGEF1-219ENST00000599846 APPBP2Q92624 585 aa18.36■□□□□ 0.53
ARHGEF1-219ENST00000599846 ZNF215Q9UL58 517 aaPredicted RBP18.36■□□□□ 0.53
ARHGEF1-219ENST00000599846 NEMFO60524 1076 aa18.35■□□□□ 0.53
ARHGEF1-219ENST00000599846 SYKP43405 635 aa18.35■□□□□ 0.53
ARHGEF1-219ENST00000599846 ANO1Q5XXA6 986 aa18.35■□□□□ 0.53
ARHGEF1-219ENST00000599846 ZNF771Q7L3S4 317 aaPredicted RBP18.35■□□□□ 0.53
ARHGEF1-219ENST00000599846 DNAJC10Q8IXB1 793 aa18.35■□□□□ 0.53
ARHGEF1-219ENST00000599846 FMR1NBQ8N0W7 255 aaPredicted RBP18.35■□□□□ 0.53
ARHGEF1-219ENST00000599846 PDILTQ8N807 584 aa18.35■□□□□ 0.53
ARHGEF1-219ENST00000599846 INCENPQ9NQS7 918 aa18.35■□□□□ 0.53
ARHGEF1-219ENST00000599846 RTEL1Q9NZ71 1219 aa18.35■□□□□ 0.53
ARHGEF1-219ENST00000599846 ZFYP08048 801 aaPredicted RBP18.34■□□□□ 0.53
ARHGEF1-219ENST00000599846 ENGASEQ8NFI3 743 aa18.34■□□□□ 0.53
ARHGEF1-219ENST00000599846 AIDAQ96BJ3 306 aa18.34■□□□□ 0.53
ARHGEF1-219ENST00000599846 TBC1D2BQ9UPU7 963 aa18.34■□□□□ 0.53
ARHGEF1-219ENST00000599846 ATL3Q6DD88 541 aa18.34■□□□□ 0.53
ARHGEF1-219ENST00000599846 KLHL34Q8N239 644 aa18.34■□□□□ 0.53
ARHGEF1-219ENST00000599846 TRMT112Q9UI30 125 aaKnown RBP18.34■□□□□ 0.53
ARHGEF1-219ENST00000599846 OVOS2A0A0G2JMS6 1433 aa18.34■□□□□ 0.53
ARHGEF1-219ENST00000599846 PFKFB1P16118 471 aa18.33■□□□□ 0.53
ARHGEF1-219ENST00000599846 TMX1Q9H3N1 280 aa18.33■□□□□ 0.53
ARHGEF1-219ENST00000599846 GPR108Q9NPR9 543 aa18.33■□□□□ 0.53
ARHGEF1-219ENST00000599846 C1orf167Q5SNV9 1468 aa18.33■□□□□ 0.53
ARHGEF1-219ENST00000599846 KIF28PB7ZC32 967 aa18.33■□□□□ 0.52
ARHGEF1-219ENST00000599846 CDK11BP21127 795 aaKnown RBP18.33■□□□□ 0.52
ARHGEF1-219ENST00000599846 TCIRG1Q13488 830 aa18.33■□□□□ 0.52
ARHGEF1-219ENST00000599846 SYT10Q6XYQ8 523 aa18.33■□□□□ 0.52
ARHGEF1-219ENST00000599846 PALLDQ8WX93 1383 aa18.33■□□□□ 0.52
ARHGEF1-219ENST00000599846 ITGA6P23229 1130 aa18.33■□□□□ 0.52
ARHGEF1-219ENST00000599846 CLIC6Q96NY7 704 aa18.33■□□□□ 0.52
ARHGEF1-219ENST00000599846 SLC26A6Q9BXS9 759 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms