RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 RFX5P48382 616 aaPredicted RBP18.89■□□□□ 0.61
LIG1-215ENST00000597901 RGMBQ6NW40 437 aa18.89■□□□□ 0.61
LIG1-215ENST00000597901 FBXO33Q7Z6M2 555 aa18.89■□□□□ 0.61
LIG1-215ENST00000597901 JAG2Q9Y219 1238 aa18.89■□□□□ 0.61
LIG1-215ENST00000597901 PCNTO95613 3336 aa18.88■□□□□ 0.61
LIG1-215ENST00000597901 HNRNPUQ00839 825 aaKnown RBP eCLIP18.88■□□□□ 0.61
LIG1-215ENST00000597901 PRAMEF18Q5VWM3 479 aa18.88■□□□□ 0.61
LIG1-215ENST00000597901 F8W031 263 aaPredicted RBP18.87■□□□□ 0.61
LIG1-215ENST00000597901 LBX1P52954 281 aa18.87■□□□□ 0.61
LIG1-215ENST00000597901 PTPN12Q05209 780 aaKnown RBP18.87■□□□□ 0.61
LIG1-215ENST00000597901 DLGAP5Q15398 846 aa18.87■□□□□ 0.61
LIG1-215ENST00000597901 FAM205AQ6ZU69 1335 aa18.87■□□□□ 0.61
LIG1-215ENST00000597901 VGLL2Q8N8G2 317 aa18.87■□□□□ 0.61
LIG1-215ENST00000597901 MTMR14Q8NCE2 650 aa18.87■□□□□ 0.61
LIG1-215ENST00000597901 HDAC5Q9UQL6 1122 aa18.87■□□□□ 0.61
LIG1-215ENST00000597901 EYA2O00167 538 aa18.86■□□□□ 0.61
LIG1-215ENST00000597901 IPO8O15397 1037 aaKnown RBP18.86■□□□□ 0.61
LIG1-215ENST00000597901 BCAR3O75815 825 aa18.86■□□□□ 0.61
LIG1-215ENST00000597901 ZNF157P51786 506 aaPredicted RBP18.86■□□□□ 0.61
LIG1-215ENST00000597901 NOGQ13253 232 aa18.86■□□□□ 0.61
LIG1-215ENST00000597901 INTS3Q68E01 1043 aaKnown RBP18.86■□□□□ 0.61
LIG1-215ENST00000597901 CCDC102AQ96A19 550 aa18.86■□□□□ 0.61
LIG1-215ENST00000597901 ZIC5Q96T25 663 aa18.86■□□□□ 0.61
LIG1-215ENST00000597901 TRPM7Q96QT4 1865 aa18.86■□□□□ 0.61
LIG1-215ENST00000597901 KIF16BQ96L93 1317 aa18.85■□□□□ 0.61
LIG1-215ENST00000597901 FAM155AB1AL88 458 aaPredicted RBP18.85■□□□□ 0.61
LIG1-215ENST00000597901 HSPA8P11142 646 aaKnown RBP18.85■□□□□ 0.61
LIG1-215ENST00000597901 FKBP1BP68106 108 aa18.85■□□□□ 0.61
LIG1-215ENST00000597901 CFAP100Q494V2 611 aa18.85■□□□□ 0.61
LIG1-215ENST00000597901 CAVIN4Q5BKX8 364 aa18.85■□□□□ 0.61
LIG1-215ENST00000597901 VPS37DQ86XT2 251 aa18.85■□□□□ 0.61
LIG1-215ENST00000597901 PRMT6Q96LA8 375 aaPredicted RBP18.85■□□□□ 0.61
LIG1-215ENST00000597901 PCDHAC2Q9Y5I4 1007 aa18.85■□□□□ 0.61
LIG1-215ENST00000597901 FGFR2P21802 821 aa18.84■□□□□ 0.61
LIG1-215ENST00000597901 ATG9AQ7Z3C6 839 aa18.84■□□□□ 0.61
LIG1-215ENST00000597901 MEIS3Q99687 375 aa18.84■□□□□ 0.61
LIG1-215ENST00000597901 LRRFIP2Q9Y608 721 aaKnown RBP18.84■□□□□ 0.61
LIG1-215ENST00000597901 POLR2AP24928 1970 aaKnown RBP18.83■□□□□ 0.61
LIG1-215ENST00000597901 BCAMP50895 628 aa18.83■□□□□ 0.6
LIG1-215ENST00000597901 MFSD14BQ5SR56 506 aa18.83■□□□□ 0.6
LIG1-215ENST00000597901 MOB2Q70IA6 237 aa18.83■□□□□ 0.6
LIG1-215ENST00000597901 APOBEC3FQ8IUX4 373 aaKnown RBP18.83■□□□□ 0.6
LIG1-215ENST00000597901 FRAT1Q92837 279 aaPredicted RBP18.83■□□□□ 0.6
LIG1-215ENST00000597901 IQSEC3Q9UPP2 1182 aaPredicted RBP18.83■□□□□ 0.6
LIG1-215ENST00000597901 PSME4Q14997 1843 aa18.83■□□□□ 0.6
LIG1-215ENST00000597901 UBE2Q2LH0YL09 131 aa18.82■□□□□ 0.6
LIG1-215ENST00000597901 IFIT1P09914 478 aaKnown RBP18.82■□□□□ 0.6
LIG1-215ENST00000597901 KIF23Q02241 960 aaPredicted RBP18.82■□□□□ 0.6
LIG1-215ENST00000597901 PUM3Q15397 648 aaKnown RBP18.82■□□□□ 0.6
LIG1-215ENST00000597901 ATF7IPQ6VMQ6 1270 aa18.82■□□□□ 0.6
LIG1-215ENST00000597901 FBXO3Q9UK99 471 aa18.82■□□□□ 0.6
LIG1-215ENST00000597901 TNNQ9UQP3 1299 aa18.82■□□□□ 0.6
LIG1-215ENST00000597901 SPDYE2BA6NHP3 402 aa18.81■□□□□ 0.6
LIG1-215ENST00000597901 CA12O43570 354 aa18.81■□□□□ 0.6
LIG1-215ENST00000597901 FRAT2O75474 233 aaPredicted RBP18.81■□□□□ 0.6
LIG1-215ENST00000597901 CIAO1O76071 339 aa18.81■□□□□ 0.6
LIG1-215ENST00000597901 GNAI3P08754 354 aa18.81■□□□□ 0.6
LIG1-215ENST00000597901 SPDYE6P0CI01 402 aa18.81■□□□□ 0.6
LIG1-215ENST00000597901 TRIM27P14373 513 aa18.81■□□□□ 0.6
LIG1-215ENST00000597901 NF2P35240 595 aa18.81■□□□□ 0.6
LIG1-215ENST00000597901 RBM5P52756 815 aaKnown RBP eCLIP18.81■□□□□ 0.6
LIG1-215ENST00000597901 SIL1Q9H173 461 aa18.81■□□□□ 0.6
LIG1-215ENST00000597901 DEFB129Q9H1M3 183 aa18.81■□□□□ 0.6
LIG1-215ENST00000597901 TTF2Q9UNY4 1162 aaKnown RBP18.81■□□□□ 0.6
LIG1-215ENST00000597901 MYO1BO43795 1136 aa18.8■□□□□ 0.6
LIG1-215ENST00000597901 CHAF1AQ13111 956 aaPredicted RBP18.8■□□□□ 0.6
LIG1-215ENST00000597901 TTLL12Q14166 644 aaPredicted RBP18.8■□□□□ 0.6
LIG1-215ENST00000597901 LPIN2Q92539 896 aa18.8■□□□□ 0.6
LIG1-215ENST00000597901 CEP126Q9P2H0 1117 aa18.8■□□□□ 0.6
LIG1-215ENST00000597901 TSKSQ9UJT2 592 aa18.8■□□□□ 0.6
LIG1-215ENST00000597901 CLRN2A0PK11 232 aa18.79■□□□□ 0.6
LIG1-215ENST00000597901 SLC10A3P09131 477 aa18.79■□□□□ 0.6
LIG1-215ENST00000597901 GRIK5Q16478 980 aa18.79■□□□□ 0.6
LIG1-215ENST00000597901 CLUAP1Q96AJ1 413 aa18.79■□□□□ 0.6
LIG1-215ENST00000597901 COPRSQ9NQ92 184 aa18.79■□□□□ 0.6
LIG1-215ENST00000597901 SERPINA10Q9UK55 444 aa18.79■□□□□ 0.6
LIG1-215ENST00000597901 PA2G4Q9UQ80 394 aaKnown RBP18.79■□□□□ 0.6
LIG1-215ENST00000597901 AOX1Q06278 1338 aa18.78■□□□□ 0.6
LIG1-215ENST00000597901 SLC5A1P13866 664 aa18.78■□□□□ 0.6
LIG1-215ENST00000597901 IL15P40933 162 aaPredicted RBP18.78■□□□□ 0.6
LIG1-215ENST00000597901 TBC1D22AQ8WUA7 517 aa18.78■□□□□ 0.6
LIG1-215ENST00000597901 CSRNP1Q96S65 589 aa18.78■□□□□ 0.6
LIG1-215ENST00000597901 ZNF646O15015 1829 aaPredicted RBP18.77■□□□□ 0.6
LIG1-215ENST00000597901 PRKG1Q13976 671 aa18.77■□□□□ 0.6
LIG1-215ENST00000597901 ZKSCAN2Q63HK3 967 aa18.77■□□□□ 0.6
LIG1-215ENST00000597901 ARMC9Q7Z3E5 817 aa18.77■□□□□ 0.6
LIG1-215ENST00000597901 RASAL3Q86YV0 1011 aa18.77■□□□□ 0.6
LIG1-215ENST00000597901 DZIP1LQ8IYY4 767 aaKnown RBP18.77■□□□□ 0.6
LIG1-215ENST00000597901 VEZTQ9HBM0 779 aa18.77■□□□□ 0.6
LIG1-215ENST00000597901 THSD7BQ9C0I4 1608 aa18.76■□□□□ 0.59
LIG1-215ENST00000597901 CRKP46108 304 aa18.76■□□□□ 0.59
LIG1-215ENST00000597901 ATP2B3Q16720 1220 aa18.76■□□□□ 0.59
LIG1-215ENST00000597901 MRIQ9BWK5 157 aa18.76■□□□□ 0.59
LIG1-215ENST00000597901 TDRD3Q9H7E2 651 aaKnown RBP18.76■□□□□ 0.59
LIG1-215ENST00000597901 ZNF70Q9UC06 446 aaPredicted RBP18.76■□□□□ 0.59
LIG1-215ENST00000597901 PPP2R3BQ9Y5P8 575 aa18.76■□□□□ 0.59
LIG1-215ENST00000597901 SRGAP3O43295 1099 aa18.75■□□□□ 0.59
LIG1-215ENST00000597901 GNAI2P04899 355 aa18.75■□□□□ 0.59
LIG1-215ENST00000597901 HDLBPQ00341 1268 aaKnown RBP18.75■□□□□ 0.59
LIG1-215ENST00000597901 MTX1Q13505 466 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms