RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 MTMR14Q8NCE2 650 aa22.49■■□□□ 1.19
CHMP2A-203ENST00000597209 TDRD7Q8NHU6 1098 aaKnown RBP22.49■■□□□ 1.19
CHMP2A-203ENST00000597209 FAM84BQ96KN1 310 aaPredicted RBP22.49■■□□□ 1.19
CHMP2A-203ENST00000597209 BEGAINQ9BUH8 593 aa22.49■■□□□ 1.19
CHMP2A-203ENST00000597209 LRRC24Q50LG9 513 aa22.48■■□□□ 1.19
CHMP2A-203ENST00000597209 MIER1Q8N108 512 aa22.48■■□□□ 1.19
CHMP2A-203ENST00000597209 VGLL2Q8N8G2 317 aa22.48■■□□□ 1.19
CHMP2A-203ENST00000597209 CCDC102AQ96A19 550 aa22.48■■□□□ 1.19
CHMP2A-203ENST00000597209 HDAC5Q9UQL6 1122 aa22.48■■□□□ 1.19
CHMP2A-203ENST00000597209 KIF16BQ96L93 1317 aa22.48■■□□□ 1.19
CHMP2A-203ENST00000597209 PDE8BO95263 885 aa22.47■■□□□ 1.19
CHMP2A-203ENST00000597209 RFX5P48382 616 aaPredicted RBP22.47■■□□□ 1.19
CHMP2A-203ENST00000597209 LBX1P52954 281 aa22.47■■□□□ 1.19
CHMP2A-203ENST00000597209 FAM155AB1AL88 458 aaPredicted RBP22.46■■□□□ 1.19
CHMP2A-203ENST00000597209 CA12O43570 354 aa22.46■■□□□ 1.19
CHMP2A-203ENST00000597209 UBTFL1P0CB47 393 aaPredicted RBP22.46■■□□□ 1.19
CHMP2A-203ENST00000597209 GYG1P46976 350 aa22.46■■□□□ 1.19
CHMP2A-203ENST00000597209 DLGAP5Q15398 846 aa22.46■■□□□ 1.19
CHMP2A-203ENST00000597209 METTL24Q5JXM2 366 aa22.46■■□□□ 1.19
CHMP2A-203ENST00000597209 FBXO33Q7Z6M2 555 aa22.46■■□□□ 1.19
CHMP2A-203ENST00000597209 APOBEC3FQ8IUX4 373 aaKnown RBP22.46■■□□□ 1.19
CHMP2A-203ENST00000597209 PAPPA2Q9BXP8 1791 aa22.45■■□□□ 1.19
CHMP2A-203ENST00000597209 EYA2O00167 538 aa22.44■■□□□ 1.18
CHMP2A-203ENST00000597209 ZNF157P51786 506 aaPredicted RBP22.44■■□□□ 1.18
CHMP2A-203ENST00000597209 KLHDC4Q8TBB5 520 aa22.44■■□□□ 1.18
CHMP2A-203ENST00000597209 FBXO3Q9UK99 471 aa22.44■■□□□ 1.18
CHMP2A-203ENST00000597209 COL1A1P02452 1464 aaPredicted RBP22.43■■□□□ 1.18
CHMP2A-203ENST00000597209 PTPN12Q05209 780 aaKnown RBP22.43■■□□□ 1.18
CHMP2A-203ENST00000597209 CAVIN4Q5BKX8 364 aa22.43■■□□□ 1.18
CHMP2A-203ENST00000597209 INTS3Q68E01 1043 aaKnown RBP22.43■■□□□ 1.18
CHMP2A-203ENST00000597209 SCAF8Q9UPN6 1271 aaKnown RBP22.43■■□□□ 1.18
CHMP2A-203ENST00000597209 SLC10A3P09131 477 aa22.42■■□□□ 1.18
CHMP2A-203ENST00000597209 FGFR2P21802 821 aa22.42■■□□□ 1.18
CHMP2A-203ENST00000597209 NF2P35240 595 aa22.42■■□□□ 1.18
CHMP2A-203ENST00000597209 CFAP100Q494V2 611 aa22.42■■□□□ 1.18
CHMP2A-203ENST00000597209 ZIC5Q96T25 663 aa22.42■■□□□ 1.18
CHMP2A-203ENST00000597209 ECM29Q5VYK3 1845 aa22.41■■□□□ 1.18
CHMP2A-203ENST00000597209 SPDYE2BA6NHP3 402 aa22.41■■□□□ 1.18
CHMP2A-203ENST00000597209 IPO8O15397 1037 aaKnown RBP22.41■■□□□ 1.18
CHMP2A-203ENST00000597209 SPDYE6P0CI01 402 aa22.41■■□□□ 1.18
CHMP2A-203ENST00000597209 MFSD14BQ5SR56 506 aa22.41■■□□□ 1.18
CHMP2A-203ENST00000597209 PRAMEF18Q5VWM3 479 aa22.41■■□□□ 1.18
CHMP2A-203ENST00000597209 VPS37DQ86XT2 251 aa22.41■■□□□ 1.18
CHMP2A-203ENST00000597209 JAG2Q9Y219 1238 aa22.41■■□□□ 1.18
CHMP2A-203ENST00000597209 F8W031 263 aaPredicted RBP22.4■■□□□ 1.18
CHMP2A-203ENST00000597209 MYO1BO43795 1136 aa22.4■■□□□ 1.18
CHMP2A-203ENST00000597209 CIAO1O76071 339 aa22.4■■□□□ 1.18
CHMP2A-203ENST00000597209 PUM3Q15397 648 aaKnown RBP22.4■■□□□ 1.18
CHMP2A-203ENST00000597209 PPP2R3BQ9Y5P8 575 aa22.4■■□□□ 1.18
CHMP2A-203ENST00000597209 ARAP2Q8WZ64 1704 aa22.4■■□□□ 1.18
CHMP2A-203ENST00000597209 IFIT1P09914 478 aaKnown RBP22.39■■□□□ 1.17
CHMP2A-203ENST00000597209 KIF23Q02241 960 aaPredicted RBP22.39■■□□□ 1.17
CHMP2A-203ENST00000597209 ATG9AQ7Z3C6 839 aa22.39■■□□□ 1.17
CHMP2A-203ENST00000597209 REM2Q8IYK8 340 aaPredicted RBP22.39■■□□□ 1.17
CHMP2A-203ENST00000597209 TBC1D22AQ8WUA7 517 aa22.39■■□□□ 1.17
CHMP2A-203ENST00000597209 PRMT6Q96LA8 375 aaPredicted RBP22.39■■□□□ 1.17
CHMP2A-203ENST00000597209 SERPINA10Q9UK55 444 aa22.39■■□□□ 1.17
CHMP2A-203ENST00000597209 LRRFIP2Q9Y608 721 aaKnown RBP22.39■■□□□ 1.17
CHMP2A-203ENST00000597209 GNAI3P08754 354 aa22.38■■□□□ 1.17
CHMP2A-203ENST00000597209 HNRNPUQ00839 825 aaKnown RBP eCLIP22.38■■□□□ 1.17
CHMP2A-203ENST00000597209 RASAL3Q86YV0 1011 aa22.38■■□□□ 1.17
CHMP2A-203ENST00000597209 LPIN2Q92539 896 aa22.38■■□□□ 1.17
CHMP2A-203ENST00000597209 MEIS3Q99687 375 aa22.38■■□□□ 1.17
CHMP2A-203ENST00000597209 DEFB129Q9H1M3 183 aa22.38■■□□□ 1.17
CHMP2A-203ENST00000597209 TTF2Q9UNY4 1162 aaKnown RBP22.38■■□□□ 1.17
CHMP2A-203ENST00000597209 PCDHAC2Q9Y5I4 1007 aa22.38■■□□□ 1.17
CHMP2A-203ENST00000597209 UBE2Q2LH0YL09 131 aa22.37■■□□□ 1.17
CHMP2A-203ENST00000597209 ATF7IPQ6VMQ6 1270 aa22.37■■□□□ 1.17
CHMP2A-203ENST00000597209 MOB2Q70IA6 237 aa22.37■■□□□ 1.17
CHMP2A-203ENST00000597209 BCAR3O75815 825 aa22.36■■□□□ 1.17
CHMP2A-203ENST00000597209 SLC5A1P13866 664 aa22.36■■□□□ 1.17
CHMP2A-203ENST00000597209 TRIM27P14373 513 aa22.36■■□□□ 1.17
CHMP2A-203ENST00000597209 BCAMP50895 628 aa22.36■■□□□ 1.17
CHMP2A-203ENST00000597209 ARMC9Q7Z3E5 817 aa22.36■■□□□ 1.17
CHMP2A-203ENST00000597209 COPRSQ9NQ92 184 aa22.36■■□□□ 1.17
CHMP2A-203ENST00000597209 SAGE1Q9NXZ1 904 aa22.36■■□□□ 1.17
CHMP2A-203ENST00000597209 FRAT2O75474 233 aaPredicted RBP22.35■■□□□ 1.17
CHMP2A-203ENST00000597209 RBM5P52756 815 aaKnown RBP eCLIP22.35■■□□□ 1.17
CHMP2A-203ENST00000597209 HDLBPQ00341 1268 aaKnown RBP22.35■■□□□ 1.17
CHMP2A-203ENST00000597209 TTLL12Q14166 644 aaPredicted RBP22.35■■□□□ 1.17
CHMP2A-203ENST00000597209 MRIQ9BWK5 157 aa22.35■■□□□ 1.17
CHMP2A-203ENST00000597209 IL15P40933 162 aaPredicted RBP22.34■■□□□ 1.17
CHMP2A-203ENST00000597209 MTX1Q13505 466 aa22.34■■□□□ 1.17
CHMP2A-203ENST00000597209 CSRNP1Q96S65 589 aa22.34■■□□□ 1.17
CHMP2A-203ENST00000597209 CEP126Q9P2H0 1117 aa22.34■■□□□ 1.17
CHMP2A-203ENST00000597209 TSKSQ9UJT2 592 aa22.34■■□□□ 1.17
CHMP2A-203ENST00000597209 IQSEC3Q9UPP2 1182 aaPredicted RBP22.34■■□□□ 1.17
CHMP2A-203ENST00000597209 SUGT1Q9Y2Z0 365 aa22.34■■□□□ 1.17
CHMP2A-203ENST00000597209 CLRN2A0PK11 232 aa22.33■■□□□ 1.17
CHMP2A-203ENST00000597209 CHAF1AQ13111 956 aaPredicted RBP22.33■■□□□ 1.17
CHMP2A-203ENST00000597209 MAP3K11Q16584 847 aa22.33■■□□□ 1.17
CHMP2A-203ENST00000597209 SPDYE2Q495Y8 402 aa22.33■■□□□ 1.17
CHMP2A-203ENST00000597209 LDLRAD1Q5T700 205 aa22.33■■□□□ 1.17
CHMP2A-203ENST00000597209 SIL1Q9H173 461 aa22.33■■□□□ 1.17
CHMP2A-203ENST00000597209 AOX1Q06278 1338 aa22.32■■□□□ 1.16
CHMP2A-203ENST00000597209 UNCXA6NJT0 531 aa22.32■■□□□ 1.16
CHMP2A-203ENST00000597209 ZBTB22O15209 634 aa22.32■■□□□ 1.16
CHMP2A-203ENST00000597209 CRKP46108 304 aa22.32■■□□□ 1.16
CHMP2A-203ENST00000597209 TNFAIP1Q13829 316 aa22.32■■□□□ 1.16
CHMP2A-203ENST00000597209 SUPT20HL1Q3ZLR7 823 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms