RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 PKN2Q16513 984 aaKnown RBP13.4□□□□□ -0.26
CHMP2A-202ENST00000596708 LDHAL6AQ6ZMR3 332 aa13.4□□□□□ -0.26
CHMP2A-202ENST00000596708 C15orf52Q6ZUT6 534 aaKnown RBP13.4□□□□□ -0.26
CHMP2A-202ENST00000596708 ZBED3Q96IU2 234 aaPredicted RBP13.4□□□□□ -0.26
CHMP2A-202ENST00000596708 ZNF594Q96JF6 807 aaPredicted RBP13.4□□□□□ -0.26
CHMP2A-202ENST00000596708 DEFB129Q9H1M3 183 aa13.4□□□□□ -0.26
CHMP2A-202ENST00000596708 CNNM1Q9NRU3 951 aa13.4□□□□□ -0.26
CHMP2A-202ENST00000596708 C9orf78Q9NZ63 289 aaPredicted RBP13.4□□□□□ -0.26
CHMP2A-202ENST00000596708 FZD1Q9UP38 647 aa13.4□□□□□ -0.26
CHMP2A-202ENST00000596708 GPR25O00155 361 aa13.39□□□□□ -0.27
CHMP2A-202ENST00000596708 PPP1R12BO60237 982 aaPredicted RBP13.39□□□□□ -0.27
CHMP2A-202ENST00000596708 RBM5P52756 815 aaKnown RBP eCLIP13.39□□□□□ -0.27
CHMP2A-202ENST00000596708 CFAP100Q494V2 611 aa13.39□□□□□ -0.27
CHMP2A-202ENST00000596708 EPHA10Q5JZY3 1008 aa13.39□□□□□ -0.27
CHMP2A-202ENST00000596708 SLC4A10Q6U841 1118 aa13.39□□□□□ -0.27
CHMP2A-202ENST00000596708 CERS5Q8N5B7 392 aa13.39□□□□□ -0.27
CHMP2A-202ENST00000596708 SLC10A4Q96EP9 437 aa13.39□□□□□ -0.27
CHMP2A-202ENST00000596708 VEZTQ9HBM0 779 aa13.39□□□□□ -0.27
CHMP2A-202ENST00000596708 HPS5Q9UPZ3 1129 aa13.39□□□□□ -0.27
CHMP2A-202ENST00000596708 JAG2Q9Y219 1238 aa13.39□□□□□ -0.27
CHMP2A-202ENST00000596708 PCDHAC2Q9Y5I4 1007 aa13.39□□□□□ -0.27
CHMP2A-202ENST00000596708 IRS2Q9Y4H2 1338 aa13.39□□□□□ -0.27
CHMP2A-202ENST00000596708 COL1A1P02452 1464 aaPredicted RBP13.38□□□□□ -0.27
CHMP2A-202ENST00000596708 CLRN2A0PK11 232 aa13.38□□□□□ -0.27
CHMP2A-202ENST00000596708 GRM8O00222 908 aa13.38□□□□□ -0.27
CHMP2A-202ENST00000596708 IL1R1P14778 569 aa13.38□□□□□ -0.27
CHMP2A-202ENST00000596708 LDLRAD1Q5T700 205 aa13.38□□□□□ -0.27
CHMP2A-202ENST00000596708 SPRYD7Q5W111 196 aa13.38□□□□□ -0.27
CHMP2A-202ENST00000596708 MTMR14Q8NCE2 650 aa13.38□□□□□ -0.27
CHMP2A-202ENST00000596708 AK9Q5TCS8 1911 aa13.38□□□□□ -0.27
CHMP2A-202ENST00000596708 FKTNO75072 461 aa13.37□□□□□ -0.27
CHMP2A-202ENST00000596708 SLC34A2O95436 690 aa13.37□□□□□ -0.27
CHMP2A-202ENST00000596708 FKBP1AP62942 108 aaKnown RBP13.37□□□□□ -0.27
CHMP2A-202ENST00000596708 SUPT20HL1Q3ZLR7 823 aa13.37□□□□□ -0.27
CHMP2A-202ENST00000596708 FAM9BQ8IZU0 186 aa13.37□□□□□ -0.27
CHMP2A-202ENST00000596708 PRMT6Q96LA8 375 aaPredicted RBP13.37□□□□□ -0.27
CHMP2A-202ENST00000596708 SPINK5Q9NQ38 1064 aaPredicted RBP13.37□□□□□ -0.27
CHMP2A-202ENST00000596708 PPP2R3BQ9Y5P8 575 aa13.37□□□□□ -0.27
CHMP2A-202ENST00000596708 LAMB1P07942 1786 aa13.37□□□□□ -0.27
CHMP2A-202ENST00000596708 MYH13Q9UKX3 1938 aa13.37□□□□□ -0.27
CHMP2A-202ENST00000596708 MANSC4A6NHS7 340 aaPredicted RBP13.36□□□□□ -0.27
CHMP2A-202ENST00000596708 ALDH1A1P00352 501 aa13.36□□□□□ -0.27
CHMP2A-202ENST00000596708 INHBEP58166 350 aa13.36□□□□□ -0.27
CHMP2A-202ENST00000596708 MAP3K11Q16584 847 aa13.36□□□□□ -0.27
CHMP2A-202ENST00000596708 NOM1Q5C9Z4 860 aaKnown RBP13.36□□□□□ -0.27
CHMP2A-202ENST00000596708 SRCIN1Q9C0H9 1055 aa13.36□□□□□ -0.27
CHMP2A-202ENST00000596708 R3HDMLQ9H3Y0 253 aa13.36□□□□□ -0.27
CHMP2A-202ENST00000596708 OTOFQ9HC10 1997 aa13.35□□□□□ -0.27
CHMP2A-202ENST00000596708 SPDYE2BA6NHP3 402 aa13.35□□□□□ -0.27
CHMP2A-202ENST00000596708 ALDH1L1O75891 902 aa13.35□□□□□ -0.27
CHMP2A-202ENST00000596708 SPDYE6P0CI01 402 aa13.35□□□□□ -0.27
CHMP2A-202ENST00000596708 IREB2P48200 963 aaKnown RBP13.35□□□□□ -0.27
CHMP2A-202ENST00000596708 NBPF12Q5TAG4 269 aaPredicted RBP13.35□□□□□ -0.27
CHMP2A-202ENST00000596708 FBXO46Q6PJ61 603 aaPredicted RBP13.35□□□□□ -0.27
CHMP2A-202ENST00000596708 WNK4Q96J92 1243 aa13.35□□□□□ -0.27
CHMP2A-202ENST00000596708 CLMNQ96JQ2 1002 aa13.35□□□□□ -0.27
CHMP2A-202ENST00000596708 ARAP2Q8WZ64 1704 aa13.35□□□□□ -0.27
CHMP2A-202ENST00000596708 ZBTB48P10074 688 aaPredicted RBP13.34□□□□□ -0.27
CHMP2A-202ENST00000596708 HIBADHP31937 336 aaKnown RBP13.34□□□□□ -0.27
CHMP2A-202ENST00000596708 GYG1P46976 350 aa13.34□□□□□ -0.27
CHMP2A-202ENST00000596708 UBE4AQ14139 1066 aa13.34□□□□□ -0.27
CHMP2A-202ENST00000596708 RASA3Q14644 834 aa13.34□□□□□ -0.27
CHMP2A-202ENST00000596708 MFSD14BQ5SR56 506 aa13.34□□□□□ -0.27
CHMP2A-202ENST00000596708 IFNL1Q8IU54 200 aa13.34□□□□□ -0.27
CHMP2A-202ENST00000596708 SUCLG2Q96I99 432 aa13.34□□□□□ -0.27
CHMP2A-202ENST00000596708 CFHR5Q9BXR6 569 aa13.34□□□□□ -0.27
CHMP2A-202ENST00000596708 TTF2Q9UNY4 1162 aaKnown RBP13.34□□□□□ -0.27
CHMP2A-202ENST00000596708 FAM205AQ6ZU69 1335 aa13.34□□□□□ -0.27
CHMP2A-202ENST00000596708 ZNF316A6NFI3 1004 aaPredicted RBP13.33□□□□□ -0.28
CHMP2A-202ENST00000596708 USP2O75604 605 aaPredicted RBP13.33□□□□□ -0.28
CHMP2A-202ENST00000596708 TDRD7Q8NHU6 1098 aaKnown RBP13.33□□□□□ -0.28
CHMP2A-202ENST00000596708 FAM84BQ96KN1 310 aaPredicted RBP13.33□□□□□ -0.28
CHMP2A-202ENST00000596708 PUS3Q9BZE2 481 aaKnown RBP13.33□□□□□ -0.28
CHMP2A-202ENST00000596708 AOX1Q06278 1338 aa13.33□□□□□ -0.28
CHMP2A-202ENST00000596708 SSC5DA1L4H1 1573 aa13.32□□□□□ -0.28
CHMP2A-202ENST00000596708 UNCXA6NJT0 531 aa13.32□□□□□ -0.28
CHMP2A-202ENST00000596708 TNFAIP1Q13829 316 aa13.32□□□□□ -0.28
CHMP2A-202ENST00000596708 OTUD7BQ6GQQ9 843 aa13.32□□□□□ -0.28
CHMP2A-202ENST00000596708 VPS37DQ86XT2 251 aa13.32□□□□□ -0.28
CHMP2A-202ENST00000596708 ANKRD13AQ8IZ07 590 aa13.32□□□□□ -0.28
CHMP2A-202ENST00000596708 TDRD3Q9H7E2 651 aaKnown RBP13.32□□□□□ -0.28
CHMP2A-202ENST00000596708 ZNF70Q9UC06 446 aaPredicted RBP13.32□□□□□ -0.28
CHMP2A-202ENST00000596708 TRIM17Q9Y577 477 aa13.32□□□□□ -0.28
CHMP2A-202ENST00000596708 KIAA0100Q14667 2235 aaKnown RBP13.32□□□□□ -0.28
CHMP2A-202ENST00000596708 IGF2BP3O00425 579 aaKnown RBP eCLIP13.31□□□□□ -0.28
CHMP2A-202ENST00000596708 FRAT2O75474 233 aaPredicted RBP13.31□□□□□ -0.28
CHMP2A-202ENST00000596708 NBPF7P0C2Y1 421 aaPredicted RBP13.31□□□□□ -0.28
CHMP2A-202ENST00000596708 SPDYE2Q495Y8 402 aa13.31□□□□□ -0.28
CHMP2A-202ENST00000596708 SERPINA10Q9UK55 444 aa13.31□□□□□ -0.28
CHMP2A-202ENST00000596708 IQSEC3Q9UPP2 1182 aaPredicted RBP13.31□□□□□ -0.28
CHMP2A-202ENST00000596708 MROH5Q6ZUA9 1318 aa13.31□□□□□ -0.28
CHMP2A-202ENST00000596708 TCP10L2B9ZVM9 353 aa13.3□□□□□ -0.28
CHMP2A-202ENST00000596708 ZEB1P37275 1124 aaPredicted RBP13.3□□□□□ -0.28
CHMP2A-202ENST00000596708 CRKP46108 304 aa13.3□□□□□ -0.28
CHMP2A-202ENST00000596708 TNNI2P48788 182 aa13.3□□□□□ -0.28
CHMP2A-202ENST00000596708 CHAF1AQ13111 956 aaPredicted RBP13.3□□□□□ -0.28
CHMP2A-202ENST00000596708 DZIP1LQ8IYY4 767 aaKnown RBP13.3□□□□□ -0.28
CHMP2A-202ENST00000596708 KAZALD1Q96I82 304 aa13.3□□□□□ -0.28
CHMP2A-202ENST00000596708 ELP3Q9H9T3 547 aa13.3□□□□□ -0.28
CHMP2A-202ENST00000596708 RIPOR2Q9Y4F9 1068 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms