RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 TAF7LQ5H9L4 462 aa20.2■□□□□ 0.82
LINC02560-201ENST00000596379 LDHAL6AQ6ZMR3 332 aa20.2■□□□□ 0.82
LINC02560-201ENST00000596379 MTMR14Q8NCE2 650 aa20.2■□□□□ 0.82
LINC02560-201ENST00000596379 DEFB129Q9H1M3 183 aa20.2■□□□□ 0.82
LINC02560-201ENST00000596379 C9orf78Q9NZ63 289 aaPredicted RBP20.2■□□□□ 0.82
LINC02560-201ENST00000596379 ANGEL1Q9UNK9 670 aaKnown RBP20.2■□□□□ 0.82
LINC02560-201ENST00000596379 FZD1Q9UP38 647 aa20.2■□□□□ 0.82
LINC02560-201ENST00000596379 PCDHAC2Q9Y5I4 1007 aa20.2■□□□□ 0.82
LINC02560-201ENST00000596379 LDLRAD1Q5T700 205 aa20.19■□□□□ 0.82
LINC02560-201ENST00000596379 ZNF296Q8WUU4 475 aaPredicted RBP20.19■□□□□ 0.82
LINC02560-201ENST00000596379 CNNM1Q9NRU3 951 aa20.19■□□□□ 0.82
LINC02560-201ENST00000596379 JAG2Q9Y219 1238 aa20.19■□□□□ 0.82
LINC02560-201ENST00000596379 SOX10P56693 466 aa20.18■□□□□ 0.82
LINC02560-201ENST00000596379 CFAP100Q494V2 611 aa20.18■□□□□ 0.82
LINC02560-201ENST00000596379 SLC4A10Q6U841 1118 aa20.18■□□□□ 0.82
LINC02560-201ENST00000596379 FAM9BQ8IZU0 186 aa20.18■□□□□ 0.82
LINC02560-201ENST00000596379 ZNF316A6NFI3 1004 aaPredicted RBP20.17■□□□□ 0.82
LINC02560-201ENST00000596379 ALDH1L1O75891 902 aa20.17■□□□□ 0.82
LINC02560-201ENST00000596379 FKBP1AP62942 108 aaKnown RBP20.17■□□□□ 0.82
LINC02560-201ENST00000596379 SREBF2Q12772 1141 aa20.17■□□□□ 0.82
LINC02560-201ENST00000596379 PRMT6Q96LA8 375 aaPredicted RBP20.17■□□□□ 0.82
LINC02560-201ENST00000596379 ECM29Q5VYK3 1845 aa20.16■□□□□ 0.82
LINC02560-201ENST00000596379 CLRN2A0PK11 232 aa20.16■□□□□ 0.82
LINC02560-201ENST00000596379 GPR25O00155 361 aa20.16■□□□□ 0.82
LINC02560-201ENST00000596379 MYO1BO43795 1136 aa20.16■□□□□ 0.82
LINC02560-201ENST00000596379 SPRYD7Q5W111 196 aa20.16■□□□□ 0.82
LINC02560-201ENST00000596379 SRCIN1Q9C0H9 1055 aa20.16■□□□□ 0.82
LINC02560-201ENST00000596379 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.16■□□□□ 0.82
LINC02560-201ENST00000596379 SPDYE2BA6NHP3 402 aa20.15■□□□□ 0.82
LINC02560-201ENST00000596379 SPDYE6P0CI01 402 aa20.15■□□□□ 0.82
LINC02560-201ENST00000596379 RBM5P52756 815 aaKnown RBP eCLIP20.15■□□□□ 0.82
LINC02560-201ENST00000596379 SLC10A4Q96EP9 437 aa20.15■□□□□ 0.82
LINC02560-201ENST00000596379 COL1A1P02452 1464 aaPredicted RBP20.15■□□□□ 0.82
LINC02560-201ENST00000596379 AOX1Q06278 1338 aa20.14■□□□□ 0.81
LINC02560-201ENST00000596379 PPP1R12BO60237 982 aaPredicted RBP20.14■□□□□ 0.81
LINC02560-201ENST00000596379 ZEB1P37275 1124 aaPredicted RBP20.14■□□□□ 0.81
LINC02560-201ENST00000596379 PKN2Q16513 984 aaKnown RBP20.14■□□□□ 0.81
LINC02560-201ENST00000596379 MAP3K11Q16584 847 aa20.14■□□□□ 0.81
LINC02560-201ENST00000596379 SUCLG2Q96I99 432 aa20.14■□□□□ 0.81
LINC02560-201ENST00000596379 PUS3Q9BZE2 481 aaKnown RBP20.14■□□□□ 0.81
LINC02560-201ENST00000596379 R3HDMLQ9H3Y0 253 aa20.14■□□□□ 0.81
LINC02560-201ENST00000596379 VEZTQ9HBM0 779 aa20.14■□□□□ 0.81
LINC02560-201ENST00000596379 HPS5Q9UPZ3 1129 aa20.14■□□□□ 0.81
LINC02560-201ENST00000596379 PPP2R3BQ9Y5P8 575 aa20.14■□□□□ 0.81
LINC02560-201ENST00000596379 UBE4AQ14139 1066 aa20.13■□□□□ 0.81
LINC02560-201ENST00000596379 SUPT20HL1Q3ZLR7 823 aa20.13■□□□□ 0.81
LINC02560-201ENST00000596379 NOM1Q5C9Z4 860 aaKnown RBP20.13■□□□□ 0.81
LINC02560-201ENST00000596379 TDRD7Q8NHU6 1098 aaKnown RBP20.13■□□□□ 0.81
LINC02560-201ENST00000596379 KAZALD1Q96I82 304 aa20.13■□□□□ 0.81
LINC02560-201ENST00000596379 FAM205AQ6ZU69 1335 aa20.12■□□□□ 0.81
LINC02560-201ENST00000596379 NBPF7P0C2Y1 421 aaPredicted RBP20.12■□□□□ 0.81
LINC02560-201ENST00000596379 GYG1P46976 350 aa20.12■□□□□ 0.81
LINC02560-201ENST00000596379 NBPF12Q5TAG4 269 aaPredicted RBP20.12■□□□□ 0.81
LINC02560-201ENST00000596379 CLMNQ96JQ2 1002 aa20.12■□□□□ 0.81
LINC02560-201ENST00000596379 FAM84BQ96KN1 310 aaPredicted RBP20.12■□□□□ 0.81
LINC02560-201ENST00000596379 CFHR5Q9BXR6 569 aa20.12■□□□□ 0.81
LINC02560-201ENST00000596379 SSC5DA1L4H1 1573 aa20.12■□□□□ 0.81
LINC02560-201ENST00000596379 FKTNO75072 461 aa20.11■□□□□ 0.81
LINC02560-201ENST00000596379 HIBADHP31937 336 aaKnown RBP20.11■□□□□ 0.81
LINC02560-201ENST00000596379 MFSD14BQ5SR56 506 aa20.11■□□□□ 0.81
LINC02560-201ENST00000596379 WNK4Q96J92 1243 aa20.11■□□□□ 0.81
LINC02560-201ENST00000596379 MANSC4A6NHS7 340 aaPredicted RBP20.1■□□□□ 0.81
LINC02560-201ENST00000596379 ALDH1A1P00352 501 aa20.1■□□□□ 0.81
LINC02560-201ENST00000596379 INHBEP58166 350 aa20.1■□□□□ 0.81
LINC02560-201ENST00000596379 RASA3Q14644 834 aa20.1■□□□□ 0.81
LINC02560-201ENST00000596379 TTF2Q9UNY4 1162 aaKnown RBP20.1■□□□□ 0.81
LINC02560-201ENST00000596379 RIPOR2Q9Y4F9 1068 aa20.1■□□□□ 0.81
LINC02560-201ENST00000596379 PDE4DIPQ5VU43 2346 aa20.09■□□□□ 0.81
LINC02560-201ENST00000596379 USP2O75604 605 aaPredicted RBP20.09■□□□□ 0.81
LINC02560-201ENST00000596379 ZBTB48P10074 688 aaPredicted RBP20.09■□□□□ 0.81
LINC02560-201ENST00000596379 IFNL1Q8IU54 200 aa20.09■□□□□ 0.81
LINC02560-201ENST00000596379 ZNF70Q9UC06 446 aaPredicted RBP20.09■□□□□ 0.81
LINC02560-201ENST00000596379 UTYO14607 1347 aa20.08■□□□□ 0.81
LINC02560-201ENST00000596379 UNCXA6NJT0 531 aa20.08■□□□□ 0.81
LINC02560-201ENST00000596379 SLC34A2O95436 690 aa20.08■□□□□ 0.81
LINC02560-201ENST00000596379 IREB2P48200 963 aaKnown RBP20.08■□□□□ 0.81
LINC02560-201ENST00000596379 BICC1Q9H694 974 aaKnown RBP20.08■□□□□ 0.81
LINC02560-201ENST00000596379 SERPINA10Q9UK55 444 aa20.08■□□□□ 0.81
LINC02560-201ENST00000596379 MROH5Q6ZUA9 1318 aa20.07■□□□□ 0.8
LINC02560-201ENST00000596379 ZNF521Q96K83 1311 aa20.07■□□□□ 0.8
LINC02560-201ENST00000596379 SPDYE2Q495Y8 402 aa20.07■□□□□ 0.8
LINC02560-201ENST00000596379 FBXO46Q6PJ61 603 aaPredicted RBP20.07■□□□□ 0.8
LINC02560-201ENST00000596379 MRPL50Q8N5N7 158 aaKnown RBP20.07■□□□□ 0.8
LINC02560-201ENST00000596379 TDRD3Q9H7E2 651 aaKnown RBP20.07■□□□□ 0.8
LINC02560-201ENST00000596379 IGF2BP3O00425 579 aaKnown RBP eCLIP20.06■□□□□ 0.8
LINC02560-201ENST00000596379 RABL6Q3YEC7 729 aaPredicted RBP20.06■□□□□ 0.8
LINC02560-201ENST00000596379 LRRC24Q50LG9 513 aa20.06■□□□□ 0.8
LINC02560-201ENST00000596379 FBXO33Q7Z6M2 555 aa20.06■□□□□ 0.8
LINC02560-201ENST00000596379 DZIP1LQ8IYY4 767 aaKnown RBP20.06■□□□□ 0.8
LINC02560-201ENST00000596379 ANKRD13AQ8IZ07 590 aa20.06■□□□□ 0.8
LINC02560-201ENST00000596379 IQSEC3Q9UPP2 1182 aaPredicted RBP20.06■□□□□ 0.8
LINC02560-201ENST00000596379 TNRC18O15417 2968 aaPredicted RBP20.06■□□□□ 0.8
LINC02560-201ENST00000596379 GJA5P36382 358 aa20.05■□□□□ 0.8
LINC02560-201ENST00000596379 TNFAIP1Q13829 316 aa20.05■□□□□ 0.8
LINC02560-201ENST00000596379 VPS37DQ86XT2 251 aa20.05■□□□□ 0.8
LINC02560-201ENST00000596379 ANKRD44Q8N8A2 993 aa20.05■□□□□ 0.8
LINC02560-201ENST00000596379 CRKP46108 304 aa20.04■□□□□ 0.8
LINC02560-201ENST00000596379 GRIK5Q16478 980 aa20.04■□□□□ 0.8
LINC02560-201ENST00000596379 METTL24Q5JXM2 366 aa20.04■□□□□ 0.8
LINC02560-201ENST00000596379 LAMB1P07942 1786 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms