RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 SLFN5Q08AF3 891 aa16.73■□□□□ 0.27
APOC1-209ENST00000592885 KAZALD1Q96I82 304 aa16.73■□□□□ 0.27
APOC1-209ENST00000592885 PPP2R3BQ9Y5P8 575 aa16.73■□□□□ 0.27
APOC1-209ENST00000592885 CASP8AP2Q9UKL3 1982 aa16.73■□□□□ 0.27
APOC1-209ENST00000592885 FAM205AQ6ZU69 1335 aa16.72■□□□□ 0.27
APOC1-209ENST00000592885 SNAP23O00161 211 aa16.72■□□□□ 0.27
APOC1-209ENST00000592885 CT47B1P0C2W7 299 aaPredicted RBP16.72■□□□□ 0.27
APOC1-209ENST00000592885 DLGAP5Q15398 846 aa16.72■□□□□ 0.27
APOC1-209ENST00000592885 CERS5Q8N5B7 392 aa16.72■□□□□ 0.27
APOC1-209ENST00000592885 LAMB1P07942 1786 aa16.72■□□□□ 0.27
APOC1-209ENST00000592885 MYO1BO43795 1136 aa16.71■□□□□ 0.27
APOC1-209ENST00000592885 ARMC9Q7Z3E5 817 aa16.71■□□□□ 0.27
APOC1-209ENST00000592885 SSH1Q8WYL5 1049 aa16.71■□□□□ 0.27
APOC1-209ENST00000592885 BICC1Q9H694 974 aaKnown RBP16.71■□□□□ 0.27
APOC1-209ENST00000592885 PLIN1O60240 522 aa16.7■□□□□ 0.26
APOC1-209ENST00000592885 TTLL12Q14166 644 aaPredicted RBP16.7■□□□□ 0.26
APOC1-209ENST00000592885 TDRD7Q8NHU6 1098 aaKnown RBP16.7■□□□□ 0.26
APOC1-209ENST00000592885 CSRNP1Q96S65 589 aa16.7■□□□□ 0.26
APOC1-209ENST00000592885 RNF186Q9NXI6 227 aa16.7■□□□□ 0.26
APOC1-209ENST00000592885 RIPOR2Q9Y4F9 1068 aa16.7■□□□□ 0.26
APOC1-209ENST00000592885 SPDYE2BA6NHP3 402 aa16.69■□□□□ 0.26
APOC1-209ENST00000592885 CCER2I3L3R5 266 aa16.69■□□□□ 0.26
APOC1-209ENST00000592885 SPDYE6P0CI01 402 aa16.69■□□□□ 0.26
APOC1-209ENST00000592885 HIBADHP31937 336 aaKnown RBP16.69■□□□□ 0.26
APOC1-209ENST00000592885 ANKRD44Q8N8A2 993 aa16.69■□□□□ 0.26
APOC1-209ENST00000592885 SCAF8Q9UPN6 1271 aaKnown RBP16.69■□□□□ 0.26
APOC1-209ENST00000592885 UBE2Q2LH0YL09 131 aa16.68■□□□□ 0.26
APOC1-209ENST00000592885 CFAP100Q494V2 611 aa16.68■□□□□ 0.26
APOC1-209ENST00000592885 PRAMEF18Q5VWM3 479 aa16.68■□□□□ 0.26
APOC1-209ENST00000592885 MOB2Q70IA6 237 aa16.68■□□□□ 0.26
APOC1-209ENST00000592885 TRMT2AQ8IZ69 625 aaKnown RBP16.68■□□□□ 0.26
APOC1-209ENST00000592885 PUS3Q9BZE2 481 aaKnown RBP16.68■□□□□ 0.26
APOC1-209ENST00000592885 MCOLN1Q9GZU1 580 aa16.68■□□□□ 0.26
APOC1-209ENST00000592885 DEFB129Q9H1M3 183 aa16.68■□□□□ 0.26
APOC1-209ENST00000592885 KIF16BQ96L93 1317 aa16.68■□□□□ 0.26
APOC1-209ENST00000592885 UNCXA6NJT0 531 aa16.67■□□□□ 0.26
APOC1-209ENST00000592885 TRPA1O75762 1119 aa16.67■□□□□ 0.26
APOC1-209ENST00000592885 MAP3K11Q16584 847 aa16.67■□□□□ 0.26
APOC1-209ENST00000592885 MFSD14BQ5SR56 506 aa16.67■□□□□ 0.26
APOC1-209ENST00000592885 FAM84BQ96KN1 310 aaPredicted RBP16.67■□□□□ 0.26
APOC1-209ENST00000592885 SMC4Q9NTJ3 1288 aa16.67■□□□□ 0.26
APOC1-209ENST00000592885 SERPINA10Q9UK55 444 aa16.67■□□□□ 0.26
APOC1-209ENST00000592885 SSC5DA1L4H1 1573 aa16.66■□□□□ 0.26
APOC1-209ENST00000592885 F8W031 263 aaPredicted RBP16.66■□□□□ 0.26
APOC1-209ENST00000592885 GYG1P46976 350 aa16.66■□□□□ 0.26
APOC1-209ENST00000592885 SREBF2Q12772 1141 aa16.66■□□□□ 0.26
APOC1-209ENST00000592885 DGKZQ13574 1117 aa16.66■□□□□ 0.26
APOC1-209ENST00000592885 METTL24Q5JXM2 366 aa16.66■□□□□ 0.26
APOC1-209ENST00000592885 LDLRAD1Q5T700 205 aa16.66■□□□□ 0.26
APOC1-209ENST00000592885 VGLL2Q8N8G2 317 aa16.66■□□□□ 0.26
APOC1-209ENST00000592885 USP44Q9H0E7 712 aa16.66■□□□□ 0.26
APOC1-209ENST00000592885 MYH13Q9UKX3 1938 aa16.65■□□□□ 0.26
APOC1-209ENST00000592885 PDE8BO95263 885 aa16.65■□□□□ 0.26
APOC1-209ENST00000592885 TM4SF4P48230 202 aa16.65■□□□□ 0.26
APOC1-209ENST00000592885 TNFAIP1Q13829 316 aa16.65■□□□□ 0.26
APOC1-209ENST00000592885 SUPT20HL1Q3ZLR7 823 aa16.65■□□□□ 0.26
APOC1-209ENST00000592885 CAVIN4Q5BKX8 364 aa16.65■□□□□ 0.26
APOC1-209ENST00000592885 VPS37DQ86XT2 251 aa16.65■□□□□ 0.26
APOC1-209ENST00000592885 TBC1D22AQ8WUA7 517 aa16.65■□□□□ 0.26
APOC1-209ENST00000592885 PPP1R12BO60237 982 aaPredicted RBP16.64■□□□□ 0.25
APOC1-209ENST00000592885 LRRC24Q50LG9 513 aa16.64■□□□□ 0.25
APOC1-209ENST00000592885 NOM1Q5C9Z4 860 aaKnown RBP16.64■□□□□ 0.25
APOC1-209ENST00000592885 FBXO33Q7Z6M2 555 aa16.64■□□□□ 0.25
APOC1-209ENST00000592885 CDCA7LQ96GN5 454 aa16.64■□□□□ 0.25
APOC1-209ENST00000592885 PRMT6Q96LA8 375 aaPredicted RBP16.64■□□□□ 0.25
APOC1-209ENST00000592885 ANGEL1Q9UNK9 670 aaKnown RBP16.64■□□□□ 0.25
APOC1-209ENST00000592885 TTF2Q9UNY4 1162 aaKnown RBP16.64■□□□□ 0.25
APOC1-209ENST00000592885 JAG2Q9Y219 1238 aa16.64■□□□□ 0.25
APOC1-209ENST00000592885 CCDC85CA6NKD9 419 aa16.63■□□□□ 0.25
APOC1-209ENST00000592885 RBM5P52756 815 aaKnown RBP eCLIP16.63■□□□□ 0.25
APOC1-209ENST00000592885 HDLBPQ00341 1268 aaKnown RBP16.63■□□□□ 0.25
APOC1-209ENST00000592885 PTPN12Q05209 780 aaKnown RBP16.63■□□□□ 0.25
APOC1-209ENST00000592885 PUM3Q15397 648 aaKnown RBP16.63■□□□□ 0.25
APOC1-209ENST00000592885 SPDYE2Q495Y8 402 aa16.63■□□□□ 0.25
APOC1-209ENST00000592885 CFHR5Q9BXR6 569 aa16.63■□□□□ 0.25
APOC1-209ENST00000592885 API5Q9BZZ5 524 aaKnown RBP16.63■□□□□ 0.25
APOC1-209ENST00000592885 VEZTQ9HBM0 779 aa16.63■□□□□ 0.25
APOC1-209ENST00000592885 FBXO3Q9UK99 471 aa16.63■□□□□ 0.25
APOC1-209ENST00000592885 HDAC5Q9UQL6 1122 aa16.63■□□□□ 0.25
APOC1-209ENST00000592885 PCDHAC2Q9Y5I4 1007 aa16.63■□□□□ 0.25
APOC1-209ENST00000592885 OTOFQ9HC10 1997 aa16.62■□□□□ 0.25
APOC1-209ENST00000592885 CLRN2A0PK11 232 aa16.62■□□□□ 0.25
APOC1-209ENST00000592885 IFIT1P09914 478 aaKnown RBP16.62■□□□□ 0.25
APOC1-209ENST00000592885 ZBTB48P10074 688 aaPredicted RBP16.62■□□□□ 0.25
APOC1-209ENST00000592885 SPRYD7Q5W111 196 aa16.62■□□□□ 0.25
APOC1-209ENST00000592885 MAST3O60307 1309 aa16.62■□□□□ 0.25
APOC1-209ENST00000592885 EYA2O00167 538 aa16.61■□□□□ 0.25
APOC1-209ENST00000592885 UBTFL1P0CB47 393 aaPredicted RBP16.61■□□□□ 0.25
APOC1-209ENST00000592885 FGFR2P21802 821 aa16.61■□□□□ 0.25
APOC1-209ENST00000592885 IREB2P48200 963 aaKnown RBP16.61■□□□□ 0.25
APOC1-209ENST00000592885 RFX5P48382 616 aaPredicted RBP16.61■□□□□ 0.25
APOC1-209ENST00000592885 RGS19P49795 217 aa16.61■□□□□ 0.25
APOC1-209ENST00000592885 PRKG1Q13976 671 aa16.61■□□□□ 0.25
APOC1-209ENST00000592885 CTU1Q7Z7A3 348 aaKnown RBP16.61■□□□□ 0.25
APOC1-209ENST00000592885 SUGT1Q9Y2Z0 365 aa16.61■□□□□ 0.25
APOC1-209ENST00000592885 MANSC4A6NHS7 340 aaPredicted RBP16.6■□□□□ 0.25
APOC1-209ENST00000592885 FRAT2O75474 233 aaPredicted RBP16.6■□□□□ 0.25
APOC1-209ENST00000592885 ALDH1A1P00352 501 aa16.6■□□□□ 0.25
APOC1-209ENST00000592885 CRKP46108 304 aa16.6■□□□□ 0.25
APOC1-209ENST00000592885 INHBEP58166 350 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms