RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 SCN9AQ15858 1988 aa25.52■■□□□ 1.68
DNMT1-227ENST00000592342 NEFLP07196 543 aa25.51■■□□□ 1.67
DNMT1-227ENST00000592342 HDAC1Q13547 482 aaPredicted RBP25.51■■□□□ 1.67
DNMT1-227ENST00000592342 CCDC158Q5M9N0 1113 aa25.51■■□□□ 1.67
DNMT1-227ENST00000592342 EAF2Q96CJ1 260 aaPredicted RBP25.51■■□□□ 1.67
DNMT1-227ENST00000592342 DBNDD2Q9BQY9 259 aa25.51■■□□□ 1.67
DNMT1-227ENST00000592342 MXD3Q9BW11 206 aa25.51■■□□□ 1.67
DNMT1-227ENST00000592342 CNOT7Q9UIV1 285 aaKnown RBP25.51■■□□□ 1.67
DNMT1-227ENST00000592342 POTECB2RU33 542 aa25.5■■□□□ 1.67
DNMT1-227ENST00000592342 H7C1D1 291 aa25.5■■□□□ 1.67
DNMT1-227ENST00000592342 EPS15P42566 896 aa25.5■■□□□ 1.67
DNMT1-227ENST00000592342 ZBTB47Q9UFB7 747 aaPredicted RBP25.5■■□□□ 1.67
DNMT1-227ENST00000592342 FAM205AQ6ZU69 1335 aa25.49■■□□□ 1.67
DNMT1-227ENST00000592342 SEMA3EO15041 775 aa25.49■■□□□ 1.67
DNMT1-227ENST00000592342 IFIT2P09913 472 aaKnown RBP25.49■■□□□ 1.67
DNMT1-227ENST00000592342 EPHX2P34913 555 aa25.49■■□□□ 1.67
DNMT1-227ENST00000592342 TTC39AQ5SRH9 613 aa25.49■■□□□ 1.67
DNMT1-227ENST00000592342 MICALL2Q8IY33 904 aa25.49■■□□□ 1.67
DNMT1-227ENST00000592342 DENND2AQ9ULE3 1009 aa25.49■■□□□ 1.67
DNMT1-227ENST00000592342 ARAP2Q8WZ64 1704 aa25.49■■□□□ 1.67
DNMT1-227ENST00000592342 MFSD14BQ5SR56 506 aa25.48■■□□□ 1.67
DNMT1-227ENST00000592342 TAF1DQ9H5J8 278 aaPredicted RBP25.48■■□□□ 1.67
DNMT1-227ENST00000592342 DBNLQ9UJU6 430 aaKnown RBP25.48■■□□□ 1.67
DNMT1-227ENST00000592342 KIF3CO14782 793 aa25.47■■□□□ 1.67
DNMT1-227ENST00000592342 USP17L8P0C7I0 530 aa25.47■■□□□ 1.67
DNMT1-227ENST00000592342 UQCRFS1P1P0C7P4 283 aa25.47■■□□□ 1.67
DNMT1-227ENST00000592342 FKBP1AP62942 108 aaKnown RBP25.47■■□□□ 1.67
DNMT1-227ENST00000592342 EAPPQ56P03 285 aaPredicted RBP25.47■■□□□ 1.67
DNMT1-227ENST00000592342 OGFOD1Q8N543 542 aa25.47■■□□□ 1.67
DNMT1-227ENST00000592342 TBC1D22AQ8WUA7 517 aa25.47■■□□□ 1.67
DNMT1-227ENST00000592342 GCC1Q96CN9 775 aa25.47■■□□□ 1.67
DNMT1-227ENST00000592342 TLR7Q9NYK1 1049 aaKnown RBP25.47■■□□□ 1.67
DNMT1-227ENST00000592342 SMARCA5O60264 1052 aaPredicted RBP25.46■■□□□ 1.67
DNMT1-227ENST00000592342 PNMA8AQ86V59 439 aaPredicted RBP25.46■■□□□ 1.67
DNMT1-227ENST00000592342 KIAA0825Q8IV33 1275 aa25.46■■□□□ 1.67
DNMT1-227ENST00000592342 WDR66Q8TBY9 1149 aa25.46■■□□□ 1.67
DNMT1-227ENST00000592342 ADARB2Q9NS39 739 aaKnown RBP25.46■■□□□ 1.67
DNMT1-227ENST00000592342 HDAC9Q9UKV0 1011 aa25.46■■□□□ 1.67
DNMT1-227ENST00000592342 SCN4AP35499 1836 aa25.46■■□□□ 1.67
DNMT1-227ENST00000592342 PSME4Q14997 1843 aa25.46■■□□□ 1.67
DNMT1-227ENST00000592342 CERS5Q8N5B7 392 aa25.45■■□□□ 1.66
DNMT1-227ENST00000592342 GMLQ99445 158 aa25.45■■□□□ 1.66
DNMT1-227ENST00000592342 SHTN1A0MZ66 631 aa25.44■■□□□ 1.66
DNMT1-227ENST00000592342 F8W031 263 aaPredicted RBP25.44■■□□□ 1.66
DNMT1-227ENST00000592342 ARID4AP29374 1257 aaPredicted RBP25.44■■□□□ 1.66
DNMT1-227ENST00000592342 RASGRF1Q13972 1273 aa25.44■■□□□ 1.66
DNMT1-227ENST00000592342 RBM26Q5T8P6 1007 aaKnown RBP25.44■■□□□ 1.66
DNMT1-227ENST00000592342 USP50Q70EL3 339 aaPredicted RBP25.43■■□□□ 1.66
DNMT1-227ENST00000592342 CLEC11AQ9Y240 323 aa25.43■■□□□ 1.66
DNMT1-227ENST00000592342 ANKRD45Q5TZF3 282 aa25.42■■□□□ 1.66
DNMT1-227ENST00000592342 SAMD7Q7Z3H4 446 aa25.42■■□□□ 1.66
DNMT1-227ENST00000592342 SPATA5Q8NB90 893 aa25.42■■□□□ 1.66
DNMT1-227ENST00000592342 ZBTB22O15209 634 aa25.41■■□□□ 1.66
DNMT1-227ENST00000592342 IGHDP01880 384 aa25.41■■□□□ 1.66
DNMT1-227ENST00000592342 MMP14P50281 582 aa25.41■■□□□ 1.66
DNMT1-227ENST00000592342 TBC1D10BQ4KMP7 808 aaPredicted RBP25.41■■□□□ 1.66
DNMT1-227ENST00000592342 ZGPATQ8N5A5 531 aaKnown RBP25.41■■□□□ 1.66
DNMT1-227ENST00000592342 TTF2Q9UNY4 1162 aaKnown RBP25.41■■□□□ 1.66
DNMT1-227ENST00000592342 COL1A1P02452 1464 aaPredicted RBP25.4■■□□□ 1.66
DNMT1-227ENST00000592342 PDS5AQ29RF7 1337 aaKnown RBP25.4■■□□□ 1.66
DNMT1-227ENST00000592342 TOMM70O94826 608 aa25.4■■□□□ 1.66
DNMT1-227ENST00000592342 ZNF280AP59817 542 aaPredicted RBP25.4■■□□□ 1.66
DNMT1-227ENST00000592342 KIF4BQ2VIQ3 1234 aa25.4■■□□□ 1.66
DNMT1-227ENST00000592342 ZNF512BQ96KM6 892 aaPredicted RBP25.4■■□□□ 1.66
DNMT1-227ENST00000592342 MYOZ2Q9NPC6 264 aa25.4■■□□□ 1.66
DNMT1-227ENST00000592342 HMG20BQ9P0W2 317 aa25.4■■□□□ 1.66
DNMT1-227ENST00000592342 MCAMP43121 646 aa25.39■■□□□ 1.66
DNMT1-227ENST00000592342 TRPM4Q8TD43 1214 aa25.39■■□□□ 1.66
DNMT1-227ENST00000592342 ABCF2Q9UG63 623 aa25.39■■□□□ 1.66
DNMT1-227ENST00000592342 SUGT1Q9Y2Z0 365 aa25.39■■□□□ 1.66
DNMT1-227ENST00000592342 MYH13Q9UKX3 1938 aa25.38■■□□□ 1.65
DNMT1-227ENST00000592342 RBM5P52756 815 aaKnown RBP eCLIP25.38■■□□□ 1.65
DNMT1-227ENST00000592342 SCARF1Q14162 830 aa25.38■■□□□ 1.65
DNMT1-227ENST00000592342 B4GALNT3Q6L9W6 998 aa25.38■■□□□ 1.65
DNMT1-227ENST00000592342 PI16Q6UXB8 463 aa25.38■■□□□ 1.65
DNMT1-227ENST00000592342 LDHDQ86WU2 507 aa25.38■■□□□ 1.65
DNMT1-227ENST00000592342 SNRKQ9NRH2 765 aa25.38■■□□□ 1.65
DNMT1-227ENST00000592342 MAST3O60307 1309 aa25.37■■□□□ 1.65
DNMT1-227ENST00000592342 SALL1Q9NSC2 1324 aa25.37■■□□□ 1.65
DNMT1-227ENST00000592342 ZNF646O15015 1829 aaPredicted RBP25.37■■□□□ 1.65
DNMT1-227ENST00000592342 LDHBP07195 334 aaKnown RBP25.37■■□□□ 1.65
DNMT1-227ENST00000592342 POTEIP0CG38 1075 aa25.37■■□□□ 1.65
DNMT1-227ENST00000592342 POTEJP0CG39 1038 aa25.37■■□□□ 1.65
DNMT1-227ENST00000592342 SPTY2D1Q68D10 685 aaPredicted RBP25.37■■□□□ 1.65
DNMT1-227ENST00000592342 SMC5Q8IY18 1101 aa25.37■■□□□ 1.65
DNMT1-227ENST00000592342 GPATCH3Q96I76 525 aa25.37■■□□□ 1.65
DNMT1-227ENST00000592342 RBM46Q8TBY0 533 aaKnown RBP25.36■■□□□ 1.65
DNMT1-227ENST00000592342 EGFRP00533 1210 aa25.35■■□□□ 1.65
DNMT1-227ENST00000592342 DLGAP5Q15398 846 aa25.35■■□□□ 1.65
DNMT1-227ENST00000592342 GRIK5Q16478 980 aa25.35■■□□□ 1.65
DNMT1-227ENST00000592342 SMC1BQ8NDV3 1235 aa25.35■■□□□ 1.65
DNMT1-227ENST00000592342 PRDX5P30044 214 aa25.34■■□□□ 1.65
DNMT1-227ENST00000592342 ZAP70P43403 619 aa25.34■■□□□ 1.65
DNMT1-227ENST00000592342 HIRAP54198 1017 aaPredicted RBP25.34■■□□□ 1.65
DNMT1-227ENST00000592342 CHADLQ6NUI6 762 aa25.34■■□□□ 1.65
DNMT1-227ENST00000592342 ERICH6Q7L0X2 663 aa25.34■■□□□ 1.65
DNMT1-227ENST00000592342 CFAP100Q494V2 611 aa25.33■■□□□ 1.65
DNMT1-227ENST00000592342 TBC1D9Q6ZT07 1266 aa25.33■■□□□ 1.65
DNMT1-227ENST00000592342 DZIP1Q86YF9 867 aaKnown RBP25.33■■□□□ 1.65
DNMT1-227ENST00000592342 ZC3H15Q8WU90 426 aaKnown RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms