RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 FKBP1AP62942 108 aaKnown RBP25.78■■□□□ 1.72
CIRBP-226ENST00000590171 IFFO2Q5TF58 517 aa25.78■■□□□ 1.72
CIRBP-226ENST00000590171 TDRD7Q8NHU6 1098 aaKnown RBP25.78■■□□□ 1.72
CIRBP-226ENST00000590171 AIDAQ96BJ3 306 aa25.78■■□□□ 1.72
CIRBP-226ENST00000590171 MEIS3Q99687 375 aa25.78■■□□□ 1.72
CIRBP-226ENST00000590171 MAP2K1Q02750 393 aaPredicted RBP25.77■■□□□ 1.72
CIRBP-226ENST00000590171 PTPN12Q05209 780 aaKnown RBP25.77■■□□□ 1.72
CIRBP-226ENST00000590171 INTS3Q68E01 1043 aaKnown RBP25.77■■□□□ 1.72
CIRBP-226ENST00000590171 C2orf69Q8N8R5 385 aa25.77■■□□□ 1.72
CIRBP-226ENST00000590171 ZBED3Q96IU2 234 aaPredicted RBP25.77■■□□□ 1.72
CIRBP-226ENST00000590171 LRRFIP2Q9Y608 721 aaKnown RBP25.77■■□□□ 1.72
CIRBP-226ENST00000590171 FAM205AQ6ZU69 1335 aa25.77■■□□□ 1.72
CIRBP-226ENST00000590171 TRIM27P14373 513 aa25.76■■□□□ 1.71
CIRBP-226ENST00000590171 TNNQ9UQP3 1299 aa25.76■■□□□ 1.71
CIRBP-226ENST00000590171 F8W031 263 aaPredicted RBP25.75■■□□□ 1.71
CIRBP-226ENST00000590171 EYA2O00167 538 aa25.75■■□□□ 1.71
CIRBP-226ENST00000590171 FRAT1Q92837 279 aaPredicted RBP25.75■■□□□ 1.71
CIRBP-226ENST00000590171 IPO8O15397 1037 aaKnown RBP25.74■■□□□ 1.71
CIRBP-226ENST00000590171 MAP2K2P36507 400 aa25.74■■□□□ 1.71
CIRBP-226ENST00000590171 FBXO33Q7Z6M2 555 aa25.74■■□□□ 1.71
CIRBP-226ENST00000590171 CTCFP49711 727 aaPredicted RBP25.73■■□□□ 1.71
CIRBP-226ENST00000590171 PRAMEF18Q5VWM3 479 aa25.73■■□□□ 1.71
CIRBP-226ENST00000590171 ATF7IPQ6VMQ6 1270 aa25.73■■□□□ 1.71
CIRBP-226ENST00000590171 ATG9AQ7Z3C6 839 aa25.73■■□□□ 1.71
CIRBP-226ENST00000590171 HDAC5Q9UQL6 1122 aa25.73■■□□□ 1.71
CIRBP-226ENST00000590171 PCDHAC2Q9Y5I4 1007 aa25.73■■□□□ 1.71
CIRBP-226ENST00000590171 FGFR2P21802 821 aa25.72■■□□□ 1.71
CIRBP-226ENST00000590171 PUM3Q15397 648 aaKnown RBP25.72■■□□□ 1.71
CIRBP-226ENST00000590171 DLGAP5Q15398 846 aa25.72■■□□□ 1.71
CIRBP-226ENST00000590171 MFSD14BQ5SR56 506 aa25.72■■□□□ 1.71
CIRBP-226ENST00000590171 RGMBQ6NW40 437 aa25.72■■□□□ 1.71
CIRBP-226ENST00000590171 MTMR14Q8NCE2 650 aa25.72■■□□□ 1.71
CIRBP-226ENST00000590171 ZBED9Q6R2W3 1325 aa25.71■■□□□ 1.71
CIRBP-226ENST00000590171 CFAP100Q494V2 611 aa25.71■■□□□ 1.71
CIRBP-226ENST00000590171 CAVIN4Q5BKX8 364 aa25.71■■□□□ 1.71
CIRBP-226ENST00000590171 VPS37DQ86XT2 251 aa25.71■■□□□ 1.71
CIRBP-226ENST00000590171 SIL1Q9H173 461 aa25.71■■□□□ 1.71
CIRBP-226ENST00000590171 IQSEC3Q9UPP2 1182 aaPredicted RBP25.71■■□□□ 1.71
CIRBP-226ENST00000590171 APOBEC3FQ8IUX4 373 aaKnown RBP25.7■■□□□ 1.7
CIRBP-226ENST00000590171 CLUAP1Q96AJ1 413 aa25.7■■□□□ 1.7
CIRBP-226ENST00000590171 PAPPA2Q9BXP8 1791 aa25.69■■□□□ 1.7
CIRBP-226ENST00000590171 FAM155AB1AL88 458 aaPredicted RBP25.69■■□□□ 1.7
CIRBP-226ENST00000590171 CIAO1O76071 339 aa25.69■■□□□ 1.7
CIRBP-226ENST00000590171 GNAI3P08754 354 aa25.69■■□□□ 1.7
CIRBP-226ENST00000590171 HSPA8P11142 646 aaKnown RBP25.69■■□□□ 1.7
CIRBP-226ENST00000590171 BCAMP50895 628 aa25.69■■□□□ 1.7
CIRBP-226ENST00000590171 FKBP1BP68106 108 aa25.69■■□□□ 1.7
CIRBP-226ENST00000590171 NOGQ13253 232 aa25.69■■□□□ 1.7
CIRBP-226ENST00000590171 ZIC5Q96T25 663 aa25.69■■□□□ 1.7
CIRBP-226ENST00000590171 FBXO3Q9UK99 471 aa25.69■■□□□ 1.7
CIRBP-226ENST00000590171 SPDYE2BA6NHP3 402 aa25.68■■□□□ 1.7
CIRBP-226ENST00000590171 IFIT1P09914 478 aaKnown RBP25.68■■□□□ 1.7
CIRBP-226ENST00000590171 SPDYE6P0CI01 402 aa25.68■■□□□ 1.7
CIRBP-226ENST00000590171 LBX1P52954 281 aa25.68■■□□□ 1.7
CIRBP-226ENST00000590171 MOB2Q70IA6 237 aa25.68■■□□□ 1.7
CIRBP-226ENST00000590171 TNS4Q8IZW8 715 aa25.68■■□□□ 1.7
CIRBP-226ENST00000590171 PRMT6Q96LA8 375 aaPredicted RBP25.68■■□□□ 1.7
CIRBP-226ENST00000590171 PRDM10Q9NQV6 1147 aa25.68■■□□□ 1.7
CIRBP-226ENST00000590171 PA2G4Q9UQ80 394 aaKnown RBP25.68■■□□□ 1.7
CIRBP-226ENST00000590171 ARAP2Q8WZ64 1704 aa25.68■■□□□ 1.7
CIRBP-226ENST00000590171 AOX1Q06278 1338 aa25.67■■□□□ 1.7
CIRBP-226ENST00000590171 ZNF157P51786 506 aaPredicted RBP25.67■■□□□ 1.7
CIRBP-226ENST00000590171 CHAF1AQ13111 956 aaPredicted RBP25.67■■□□□ 1.7
CIRBP-226ENST00000590171 ZKSCAN2Q63HK3 967 aa25.67■■□□□ 1.7
CIRBP-226ENST00000590171 LPIN2Q92539 896 aa25.67■■□□□ 1.7
CIRBP-226ENST00000590171 BEGAINQ9BUH8 593 aa25.67■■□□□ 1.7
CIRBP-226ENST00000590171 TTF2Q9UNY4 1162 aaKnown RBP25.67■■□□□ 1.7
CIRBP-226ENST00000590171 SLC5A1P13866 664 aa25.66■■□□□ 1.7
CIRBP-226ENST00000590171 GRIK5Q16478 980 aa25.66■■□□□ 1.7
CIRBP-226ENST00000590171 CCDC102AQ96A19 550 aa25.66■■□□□ 1.7
CIRBP-226ENST00000590171 COPRSQ9NQ92 184 aa25.66■■□□□ 1.7
CIRBP-226ENST00000590171 COL1A1P02452 1464 aaPredicted RBP25.66■■□□□ 1.7
CIRBP-226ENST00000590171 CLRN2A0PK11 232 aa25.65■■□□□ 1.7
CIRBP-226ENST00000590171 FRAT2O75474 233 aaPredicted RBP25.65■■□□□ 1.7
CIRBP-226ENST00000590171 SLC10A3P09131 477 aa25.65■■□□□ 1.7
CIRBP-226ENST00000590171 RBM5P52756 815 aaKnown RBP eCLIP25.65■■□□□ 1.72e-12■□□□□ 8.3
CIRBP-226ENST00000590171 MYO1BO43795 1136 aa25.64■■□□□ 1.7
CIRBP-226ENST00000590171 NF2P35240 595 aa25.64■■□□□ 1.7
CIRBP-226ENST00000590171 IL15P40933 162 aaPredicted RBP25.64■■□□□ 1.7
CIRBP-226ENST00000590171 MTX1Q13505 466 aa25.64■■□□□ 1.7
CIRBP-226ENST00000590171 TMEM57Q8N5G2 664 aa25.64■■□□□ 1.7
CIRBP-226ENST00000590171 DEFB129Q9H1M3 183 aa25.64■■□□□ 1.7
CIRBP-226ENST00000590171 CEP126Q9P2H0 1117 aa25.64■■□□□ 1.7
CIRBP-226ENST00000590171 SERPINA10Q9UK55 444 aa25.64■■□□□ 1.7
CIRBP-226ENST00000590171 SRGAP3O43295 1099 aa25.63■■□□□ 1.69
CIRBP-226ENST00000590171 ATP2B3Q16720 1220 aa25.63■■□□□ 1.69
CIRBP-226ENST00000590171 TBC1D22AQ8WUA7 517 aa25.63■■□□□ 1.69
CIRBP-226ENST00000590171 UBE2Q2LH0YL09 131 aa25.62■■□□□ 1.69
CIRBP-226ENST00000590171 RASAL3Q86YV0 1011 aa25.62■■□□□ 1.69
CIRBP-226ENST00000590171 TSKSQ9UJT2 592 aa25.62■■□□□ 1.69
CIRBP-226ENST00000590171 ECM29Q5VYK3 1845 aa25.62■■□□□ 1.69
CIRBP-226ENST00000590171 GNAI2P04899 355 aa25.61■■□□□ 1.69
CIRBP-226ENST00000590171 KIF23Q02241 960 aaPredicted RBP25.61■■□□□ 1.69
CIRBP-226ENST00000590171 TTLL12Q14166 644 aaPredicted RBP25.61■■□□□ 1.69
CIRBP-226ENST00000590171 VEZTQ9HBM0 779 aa25.61■■□□□ 1.69
CIRBP-226ENST00000590171 PPP2R3BQ9Y5P8 575 aa25.61■■□□□ 1.69
CIRBP-226ENST00000590171 CRKP46108 304 aa25.6■■□□□ 1.69
CIRBP-226ENST00000590171 SSC5DA1L4H1 1573 aa25.6■■□□□ 1.69
CIRBP-226ENST00000590171 CA12O43570 354 aa25.59■■□□□ 1.69
CIRBP-226ENST00000590171 PRKG1Q13976 671 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms