RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 PAOXQ6QHF9 649 aa6.69□□□□□ -1.34
SMAD4-207ENST00000589076 XKR5Q6UX68 686 aa6.69□□□□□ -1.34
SMAD4-207ENST00000589076 CAPN12Q6ZSI9 719 aa6.69□□□□□ -1.34
SMAD4-207ENST00000589076 CLP1Q92989 425 aaKnown RBP6.69□□□□□ -1.34
SMAD4-207ENST00000589076 SALL4Q9UJQ4 1053 aa6.69□□□□□ -1.34
SMAD4-207ENST00000589076 FBXL6Q8N531 539 aa6.68□□□□□ -1.34
SMAD4-207ENST00000589076 BSNDQ8WZ55 320 aa6.68□□□□□ -1.34
SMAD4-207ENST00000589076 FBXL18Q96ME1 805 aa6.68□□□□□ -1.34
SMAD4-207ENST00000589076 USP26Q9BXU7 913 aa6.68□□□□□ -1.34
SMAD4-207ENST00000589076 DZANK1Q9NVP4 752 aa6.68□□□□□ -1.34
SMAD4-207ENST00000589076 FAM95CA0A1B0GW59 222 aa6.67□□□□□ -1.34
SMAD4-207ENST00000589076 ADAMTS4O75173 837 aa6.67□□□□□ -1.34
SMAD4-207ENST00000589076 DNM1Q05193 864 aaKnown RBP6.67□□□□□ -1.34
SMAD4-207ENST00000589076 TMEM164Q5U3C3 297 aa6.67□□□□□ -1.34
SMAD4-207ENST00000589076 TMEM102Q8N9M5 508 aaPredicted RBP6.67□□□□□ -1.34
SMAD4-207ENST00000589076 EDEM1Q92611 657 aa6.67□□□□□ -1.34
SMAD4-207ENST00000589076 CNTN3Q9P232 1028 aa6.67□□□□□ -1.34
SMAD4-207ENST00000589076 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.66□□□□□ -1.34
SMAD4-207ENST00000589076 EDN3P14138 238 aa6.66□□□□□ -1.34
SMAD4-207ENST00000589076 FOSL1P15407 271 aa6.66□□□□□ -1.34
SMAD4-207ENST00000589076 ATP2B4P23634 1241 aa6.66□□□□□ -1.34
SMAD4-207ENST00000589076 NFKBIBQ15653 356 aa6.66□□□□□ -1.34
SMAD4-207ENST00000589076 SGO2Q562F6 1265 aa6.66□□□□□ -1.34
SMAD4-207ENST00000589076 NOM1Q5C9Z4 860 aaKnown RBP6.66□□□□□ -1.34
SMAD4-207ENST00000589076 ALKBH2Q6NS38 261 aa6.66□□□□□ -1.34
SMAD4-207ENST00000589076 ADAMTSL4Q6UY14 1074 aa6.66□□□□□ -1.34
SMAD4-207ENST00000589076 C1orf127Q8N9H9 656 aa6.66□□□□□ -1.34
SMAD4-207ENST00000589076 SMG8Q8ND04 991 aaKnown RBP6.66□□□□□ -1.34
SMAD4-207ENST00000589076 SUGCTQ9HAC7 445 aa6.66□□□□□ -1.34
SMAD4-207ENST00000589076 ADGRE2Q9UHX3 823 aa6.66□□□□□ -1.34
SMAD4-207ENST00000589076 SOX13Q9UN79 622 aa6.66□□□□□ -1.34
SMAD4-207ENST00000589076 FZD5Q13467 585 aa6.65□□□□□ -1.34
SMAD4-207ENST00000589076 AAMPQ13685 434 aa6.65□□□□□ -1.34
SMAD4-207ENST00000589076 HP1BP3Q5SSJ5 553 aaPredicted RBP6.65□□□□□ -1.34
SMAD4-207ENST00000589076 ATCAYQ86WG3 371 aa6.65□□□□□ -1.34
SMAD4-207ENST00000589076 TP53INP2Q8IXH6 220 aa6.65□□□□□ -1.34
SMAD4-207ENST00000589076 ASIC4Q96FT7 647 aa6.65□□□□□ -1.34
SMAD4-207ENST00000589076 OSMRQ99650 979 aa6.65□□□□□ -1.34
SMAD4-207ENST00000589076 ARID3CA6NKF2 412 aa6.64□□□□□ -1.35
SMAD4-207ENST00000589076 MZF1P28698 734 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-207ENST00000589076 EHHADHQ08426 723 aa6.64□□□□□ -1.35
SMAD4-207ENST00000589076 EXOSC6Q5RKV6 272 aaKnown RBP6.64□□□□□ -1.35
SMAD4-207ENST00000589076 VSIG10LQ86VR7 867 aa6.64□□□□□ -1.35
SMAD4-207ENST00000589076 HELQQ8TDG4 1101 aa6.64□□□□□ -1.35
SMAD4-207ENST00000589076 ASAP3Q8TDY4 903 aa6.64□□□□□ -1.35
SMAD4-207ENST00000589076 TMPRSS13Q9BYE2 586 aa6.64□□□□□ -1.35
SMAD4-207ENST00000589076 SOX17Q9H6I2 414 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-207ENST00000589076 ZFYVE1Q9HBF4 777 aa6.64□□□□□ -1.35
SMAD4-207ENST00000589076 NFKBIEO00221 500 aa6.63□□□□□ -1.35
SMAD4-207ENST00000589076 CYP26A1O43174 497 aa6.63□□□□□ -1.35
SMAD4-207ENST00000589076 PHACTR2O75167 634 aa6.63□□□□□ -1.35
SMAD4-207ENST00000589076 PDGFAP04085 211 aa6.63□□□□□ -1.35
SMAD4-207ENST00000589076 HOXA10P31260 410 aaPredicted RBP6.63□□□□□ -1.35
SMAD4-207ENST00000589076 USP5P45974 858 aa6.63□□□□□ -1.35
SMAD4-207ENST00000589076 DUSP27Q5VZP5 1158 aa6.63□□□□□ -1.35
SMAD4-207ENST00000589076 ABI1Q8IZP0 508 aa6.63□□□□□ -1.35
SMAD4-207ENST00000589076 NXPE3Q969Y0 559 aa6.63□□□□□ -1.35
SMAD4-207ENST00000589076 PBXIP1Q96AQ6 731 aa6.63□□□□□ -1.35
SMAD4-207ENST00000589076 TBC1D32Q96NH3 1257 aa6.63□□□□□ -1.35
SMAD4-207ENST00000589076 C1orf115Q9H7X2 142 aa6.63□□□□□ -1.35
SMAD4-207ENST00000589076 BSDC1Q9NW68 430 aaPredicted RBP6.63□□□□□ -1.35
SMAD4-207ENST00000589076 CCDC39Q9UFE4 941 aa6.63□□□□□ -1.35
SMAD4-207ENST00000589076 KRTAP4-8A0A0G2JLE6 195 aa6.62□□□□□ -1.35
SMAD4-207ENST00000589076 SOX1O00570 391 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-207ENST00000589076 F13BP05160 661 aa6.62□□□□□ -1.35
SMAD4-207ENST00000589076 ACPPP15309 386 aa6.62□□□□□ -1.35
SMAD4-207ENST00000589076 CYP27A1Q02318 531 aa6.62□□□□□ -1.35
SMAD4-207ENST00000589076 AGBL5Q8NDL9 886 aa6.62□□□□□ -1.35
SMAD4-207ENST00000589076 CCDC97Q96F63 343 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-207ENST00000589076 SEPT3Q9UH03 358 aa6.62□□□□□ -1.35
SMAD4-207ENST00000589076 LOC100289279A0A1B0GTE1 492 aa6.61□□□□□ -1.35
SMAD4-207ENST00000589076 TRPA1O75762 1119 aa6.61□□□□□ -1.35
SMAD4-207ENST00000589076 TIAF1O95411 115 aa6.61□□□□□ -1.35
SMAD4-207ENST00000589076 PRNPP04156 253 aa6.61□□□□□ -1.35
SMAD4-207ENST00000589076 GSTM4Q03013 218 aa6.61□□□□□ -1.35
SMAD4-207ENST00000589076 HOMEZQ8IX15 550 aa6.61□□□□□ -1.35
SMAD4-207ENST00000589076 DDX54Q8TDD1 881 aaKnown RBP6.61□□□□□ -1.35
SMAD4-207ENST00000589076 SNX29Q8TEQ0 813 aa6.61□□□□□ -1.35
SMAD4-207ENST00000589076 FBLIM1Q8WUP2 373 aa6.61□□□□□ -1.35
SMAD4-207ENST00000589076 ZKSCAN3Q9BRR0 538 aa6.61□□□□□ -1.35
SMAD4-207ENST00000589076 GGNBP2Q9H3C7 697 aa6.61□□□□□ -1.35
SMAD4-207ENST00000589076 MTMR7Q9Y216 660 aa6.61□□□□□ -1.35
SMAD4-207ENST00000589076 JUNBP17275 347 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-207ENST00000589076 SRPK2P78362 688 aaKnown RBP6.6□□□□□ -1.35
SMAD4-207ENST00000589076 MAP7Q14244 749 aa6.6□□□□□ -1.35
SMAD4-207ENST00000589076 MSMPQ1L6U9 139 aa6.6□□□□□ -1.35
SMAD4-207ENST00000589076 VN1R5Q7Z5H4 357 aa6.6□□□□□ -1.35
SMAD4-207ENST00000589076 HHIPQ96QV1 700 aa6.6□□□□□ -1.35
SMAD4-207ENST00000589076 EIF1AXP47813 144 aaKnown RBP6.59□□□□□ -1.35
SMAD4-207ENST00000589076 SOX4Q06945 474 aaPredicted RBP6.59□□□□□ -1.35
SMAD4-207ENST00000589076 ZAR1Q86SH2 424 aa6.59□□□□□ -1.35
SMAD4-207ENST00000589076 FLCNQ8NFG4 579 aa6.59□□□□□ -1.35
SMAD4-207ENST00000589076 CHRDQ9H2X0 955 aa6.59□□□□□ -1.35
SMAD4-207ENST00000589076 SERPINA10Q9UK55 444 aa6.59□□□□□ -1.35
SMAD4-207ENST00000589076 A6NHS1 94 aa6.58□□□□□ -1.36
SMAD4-207ENST00000589076 EREGO14944 169 aa6.58□□□□□ -1.36
SMAD4-207ENST00000589076 TNFRSF21O75509 655 aa6.58□□□□□ -1.36
SMAD4-207ENST00000589076 CYP11A1P05108 521 aa6.58□□□□□ -1.36
SMAD4-207ENST00000589076 ESRRAP11474 423 aaPredicted RBP6.58□□□□□ -1.36
SMAD4-207ENST00000589076 DRD2P14416 443 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms