RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 EPHA10Q5JZY3 1008 aa17.37■□□□□ 0.37
HDAC5-208ENST00000588419 ARMC9Q7Z3E5 817 aa17.37■□□□□ 0.37
HDAC5-208ENST00000588419 ANGEL1Q9UNK9 670 aaKnown RBP17.37■□□□□ 0.37
HDAC5-208ENST00000588419 PCDHAC2Q9Y5I4 1007 aa17.37■□□□□ 0.37
HDAC5-208ENST00000588419 CLRN2A0PK11 232 aa17.36■□□□□ 0.37
HDAC5-208ENST00000588419 TBC1D8O95759 1140 aa17.36■□□□□ 0.37
HDAC5-208ENST00000588419 RBM5P52756 815 aaKnown RBP eCLIP17.36■□□□□ 0.37
HDAC5-208ENST00000588419 SOX10P56693 466 aa17.36■□□□□ 0.37
HDAC5-208ENST00000588419 LDHAL6AQ6ZMR3 332 aa17.36■□□□□ 0.37
HDAC5-208ENST00000588419 REM2Q8IYK8 340 aaPredicted RBP17.36■□□□□ 0.37
HDAC5-208ENST00000588419 CERS5Q8N5B7 392 aa17.36■□□□□ 0.37
HDAC5-208ENST00000588419 VEZTQ9HBM0 779 aa17.36■□□□□ 0.37
HDAC5-208ENST00000588419 COL1A1P02452 1464 aaPredicted RBP17.36■□□□□ 0.37
HDAC5-208ENST00000588419 PTPN12Q05209 780 aaKnown RBP17.34■□□□□ 0.37
HDAC5-208ENST00000588419 CFAP100Q494V2 611 aa17.34■□□□□ 0.37
HDAC5-208ENST00000588419 CTU1Q7Z7A3 348 aaKnown RBP17.34■□□□□ 0.37
HDAC5-208ENST00000588419 SRCIN1Q9C0H9 1055 aa17.34■□□□□ 0.37
HDAC5-208ENST00000588419 IRS2Q9Y4H2 1338 aa17.34■□□□□ 0.37
HDAC5-208ENST00000588419 LAMB1P07942 1786 aa17.33■□□□□ 0.37
HDAC5-208ENST00000588419 MYO1BO43795 1136 aa17.33■□□□□ 0.36
HDAC5-208ENST00000588419 MMP14P50281 582 aa17.33■□□□□ 0.36
HDAC5-208ENST00000588419 SUCLG2Q96I99 432 aa17.33■□□□□ 0.36
HDAC5-208ENST00000588419 DEFB129Q9H1M3 183 aa17.33■□□□□ 0.36
HDAC5-208ENST00000588419 SSC5DA1L4H1 1573 aa17.32■□□□□ 0.36
HDAC5-208ENST00000588419 IL1R1P14778 569 aa17.32■□□□□ 0.36
HDAC5-208ENST00000588419 SREBF2Q12772 1141 aa17.32■□□□□ 0.36
HDAC5-208ENST00000588419 ZBED3Q96IU2 234 aaPredicted RBP17.32■□□□□ 0.36
HDAC5-208ENST00000588419 ALDH1L1O75891 902 aa17.31■□□□□ 0.36
HDAC5-208ENST00000588419 GYG1P46976 350 aa17.31■□□□□ 0.36
HDAC5-208ENST00000588419 RGS19P49795 217 aa17.31■□□□□ 0.36
HDAC5-208ENST00000588419 C15orf52Q6ZUT6 534 aaKnown RBP17.31■□□□□ 0.36
HDAC5-208ENST00000588419 ZNF296Q8WUU4 475 aaPredicted RBP17.31■□□□□ 0.36
HDAC5-208ENST00000588419 AOX1Q06278 1338 aa17.3■□□□□ 0.36
HDAC5-208ENST00000588419 SPDYE2BA6NHP3 402 aa17.3■□□□□ 0.36
HDAC5-208ENST00000588419 SPDYE6P0CI01 402 aa17.3■□□□□ 0.36
HDAC5-208ENST00000588419 PUS3Q9BZE2 481 aaKnown RBP17.3■□□□□ 0.36
HDAC5-208ENST00000588419 NBPF7P0C2Y1 421 aaPredicted RBP17.29■□□□□ 0.36
HDAC5-208ENST00000588419 MFSD14BQ5SR56 506 aa17.29■□□□□ 0.36
HDAC5-208ENST00000588419 CLMNQ96JQ2 1002 aa17.29■□□□□ 0.36
HDAC5-208ENST00000588419 PRMT6Q96LA8 375 aaPredicted RBP17.29■□□□□ 0.36
HDAC5-208ENST00000588419 IQSEC3Q9UPP2 1182 aaPredicted RBP17.29■□□□□ 0.36
HDAC5-208ENST00000588419 AK9Q5TCS8 1911 aa17.28■□□□□ 0.36
HDAC5-208ENST00000588419 PPP1R12BO60237 982 aaPredicted RBP17.28■□□□□ 0.36
HDAC5-208ENST00000588419 TM4SF4P48230 202 aa17.28■□□□□ 0.36
HDAC5-208ENST00000588419 CHAF1AQ13111 956 aaPredicted RBP17.28■□□□□ 0.36
HDAC5-208ENST00000588419 SPRYD7Q5W111 196 aa17.28■□□□□ 0.36
HDAC5-208ENST00000588419 VPS37DQ86XT2 251 aa17.28■□□□□ 0.36
HDAC5-208ENST00000588419 MTMR14Q8NCE2 650 aa17.28■□□□□ 0.36
HDAC5-208ENST00000588419 SLC10A4Q96EP9 437 aa17.28■□□□□ 0.36
HDAC5-208ENST00000588419 BICC1Q9H694 974 aaKnown RBP17.28■□□□□ 0.36
HDAC5-208ENST00000588419 TTF2Q9UNY4 1162 aaKnown RBP17.28■□□□□ 0.36
HDAC5-208ENST00000588419 HPS5Q9UPZ3 1129 aa17.28■□□□□ 0.36
HDAC5-208ENST00000588419 PPP2R3BQ9Y5P8 575 aa17.28■□□□□ 0.36
HDAC5-208ENST00000588419 GPR25O00155 361 aa17.27■□□□□ 0.36
HDAC5-208ENST00000588419 HIBADHP31937 336 aaKnown RBP17.27■□□□□ 0.36
HDAC5-208ENST00000588419 FKBP1AP62942 108 aaKnown RBP17.27■□□□□ 0.36
HDAC5-208ENST00000588419 NBPF12Q5TAG4 269 aaPredicted RBP17.27■□□□□ 0.36
HDAC5-208ENST00000588419 FRAT2O75474 233 aaPredicted RBP17.26■□□□□ 0.35
HDAC5-208ENST00000588419 UBE4AQ14139 1066 aa17.26■□□□□ 0.35
HDAC5-208ENST00000588419 SUPT20HL1Q3ZLR7 823 aa17.26■□□□□ 0.35
HDAC5-208ENST00000588419 METTL24Q5JXM2 366 aa17.26■□□□□ 0.35
HDAC5-208ENST00000588419 LDLRAD1Q5T700 205 aa17.26■□□□□ 0.35
HDAC5-208ENST00000588419 KAZALD1Q96I82 304 aa17.26■□□□□ 0.35
HDAC5-208ENST00000588419 WNK4Q96J92 1243 aa17.26■□□□□ 0.35
HDAC5-208ENST00000588419 TDRD3Q9H7E2 651 aaKnown RBP17.26■□□□□ 0.35
HDAC5-208ENST00000588419 MROH5Q6ZUA9 1318 aa17.25■□□□□ 0.35
HDAC5-208ENST00000588419 FKTNO75072 461 aa17.25■□□□□ 0.35
HDAC5-208ENST00000588419 IREB2P48200 963 aaKnown RBP17.25■□□□□ 0.35
HDAC5-208ENST00000588419 RASA3Q14644 834 aa17.25■□□□□ 0.35
HDAC5-208ENST00000588419 LRRC24Q50LG9 513 aa17.25■□□□□ 0.35
HDAC5-208ENST00000588419 MRPL50Q8N5N7 158 aaKnown RBP17.25■□□□□ 0.35
HDAC5-208ENST00000588419 TDRD7Q8NHU6 1098 aaKnown RBP17.25■□□□□ 0.35
HDAC5-208ENST00000588419 R3HDMLQ9H3Y0 253 aa17.25■□□□□ 0.35
HDAC5-208ENST00000588419 FAM205AQ6ZU69 1335 aa17.24■□□□□ 0.35
HDAC5-208ENST00000588419 MANSC4A6NHS7 340 aaPredicted RBP17.24■□□□□ 0.35
HDAC5-208ENST00000588419 TCP10L2B9ZVM9 353 aa17.24■□□□□ 0.35
HDAC5-208ENST00000588419 TNFAIP1Q13829 316 aa17.24■□□□□ 0.35
HDAC5-208ENST00000588419 KLHDC4Q8TBB5 520 aa17.24■□□□□ 0.35
HDAC5-208ENST00000588419 FAM84BQ96KN1 310 aaPredicted RBP17.24■□□□□ 0.35
HDAC5-208ENST00000588419 ZNF70Q9UC06 446 aaPredicted RBP17.24■□□□□ 0.35
HDAC5-208ENST00000588419 ZNF521Q96K83 1311 aa17.23■□□□□ 0.35
HDAC5-208ENST00000588419 PKN2Q16513 984 aaKnown RBP17.23■□□□□ 0.35
HDAC5-208ENST00000588419 MAP3K11Q16584 847 aa17.23■□□□□ 0.35
HDAC5-208ENST00000588419 SPDYE2Q495Y8 402 aa17.23■□□□□ 0.35
HDAC5-208ENST00000588419 IFNL1Q8IU54 200 aa17.23■□□□□ 0.35
HDAC5-208ENST00000588419 ELP3Q9H9T3 547 aa17.23■□□□□ 0.35
HDAC5-208ENST00000588419 ALDH1A1P00352 501 aa17.22■□□□□ 0.35
HDAC5-208ENST00000588419 ZBTB48P10074 688 aaPredicted RBP17.22■□□□□ 0.35
HDAC5-208ENST00000588419 CRKP46108 304 aa17.22■□□□□ 0.35
HDAC5-208ENST00000588419 CAVIN4Q5BKX8 364 aa17.22■□□□□ 0.35
HDAC5-208ENST00000588419 CDAN1Q8IWY9 1227 aa17.22■□□□□ 0.35
HDAC5-208ENST00000588419 DZIP1LQ8IYY4 767 aaKnown RBP17.22■□□□□ 0.35
HDAC5-208ENST00000588419 ANKRD44Q8N8A2 993 aa17.22■□□□□ 0.35
HDAC5-208ENST00000588419 SERPINA10Q9UK55 444 aa17.22■□□□□ 0.35
HDAC5-208ENST00000588419 RIPOR2Q9Y4F9 1068 aa17.22■□□□□ 0.35
HDAC5-208ENST00000588419 PDE4DIPQ5VU43 2346 aa17.22■□□□□ 0.35
HDAC5-208ENST00000588419 UTYO14607 1347 aa17.21■□□□□ 0.35
HDAC5-208ENST00000588419 PTPRCP08575 1304 aa17.21■□□□□ 0.35
HDAC5-208ENST00000588419 IGF2BP3O00425 579 aaKnown RBP eCLIP17.21■□□□□ 0.35
HDAC5-208ENST00000588419 USP2O75604 605 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms