RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 TMEM260Q9NX78 707 aa6.66□□□□□ -1.34
LINC01538-201ENST00000588074 KLK14Q9P0G3 267 aa6.66□□□□□ -1.34
LINC01538-201ENST00000588074 KIAA1107Q9UPP5 1409 aa6.66□□□□□ -1.34
LINC01538-201ENST00000588074 KTN1Q86UP2 1357 aaKnown RBP6.66□□□□□ -1.34
LINC01538-201ENST00000588074 SETSIPP0DME0 302 aa6.66□□□□□ -1.34
LINC01538-201ENST00000588074 FOXK2Q01167 660 aa6.66□□□□□ -1.34
LINC01538-201ENST00000588074 PPP2R5AQ15172 486 aa6.66□□□□□ -1.34
LINC01538-201ENST00000588074 CDC37Q16543 378 aaPredicted RBP6.66□□□□□ -1.34
LINC01538-201ENST00000588074 SYCP2LQ5T4T6 812 aa6.66□□□□□ -1.34
LINC01538-201ENST00000588074 POTEEQ6S8J3 1075 aa6.66□□□□□ -1.34
LINC01538-201ENST00000588074 CCDC81Q6ZN84 652 aa6.66□□□□□ -1.34
LINC01538-201ENST00000588074 GPR152Q8TDT2 470 aa6.66□□□□□ -1.34
LINC01538-201ENST00000588074 FOXD3Q9UJU5 478 aaPredicted RBP6.66□□□□□ -1.34
LINC01538-201ENST00000588074 MSRB2Q9Y3D2 182 aa6.66□□□□□ -1.34
LINC01538-201ENST00000588074 MINDY4BA8MYZ0 360 aa6.65□□□□□ -1.34
LINC01538-201ENST00000588074 NR1I2O75469 434 aa6.65□□□□□ -1.34
LINC01538-201ENST00000588074 CYP2C19P33261 490 aa6.65□□□□□ -1.34
LINC01538-201ENST00000588074 AGERQ15109 404 aa6.65□□□□□ -1.34
LINC01538-201ENST00000588074 NXPE4Q6UWF7 544 aa6.65□□□□□ -1.34
LINC01538-201ENST00000588074 KRT222Q8N1A0 295 aa6.65□□□□□ -1.34
LINC01538-201ENST00000588074 IL17RAQ96F46 866 aa6.65□□□□□ -1.34
LINC01538-201ENST00000588074 GNL3LQ9NVN8 582 aaKnown RBP6.65□□□□□ -1.34
LINC01538-201ENST00000588074 WDR97A6NE52 1622 aa6.65□□□□□ -1.35
LINC01538-201ENST00000588074 PSDA5PKW4 1024 aaPredicted RBP6.65□□□□□ -1.35
LINC01538-201ENST00000588074 CCP110O43303 1012 aa6.65□□□□□ -1.35
LINC01538-201ENST00000588074 MYCP01106 439 aaPredicted RBP6.65□□□□□ -1.35
LINC01538-201ENST00000588074 INHAP05111 366 aa6.65□□□□□ -1.35
LINC01538-201ENST00000588074 VIL1P09327 827 aaKnown RBP6.65□□□□□ -1.35
LINC01538-201ENST00000588074 TNNT1P13805 278 aa6.65□□□□□ -1.35
LINC01538-201ENST00000588074 ABCD1P33897 745 aa6.65□□□□□ -1.35
LINC01538-201ENST00000588074 HNRNPH2P55795 449 aaKnown RBP6.65□□□□□ -1.35
LINC01538-201ENST00000588074 KIAA2012Q0VF49 1180 aa6.65□□□□□ -1.35
LINC01538-201ENST00000588074 DMRTA1Q5VZB9 504 aa6.65□□□□□ -1.35
LINC01538-201ENST00000588074 BAP1Q92560 729 aa6.65□□□□□ -1.35
LINC01538-201ENST00000588074 RANBP17Q9H2T7 1088 aaKnown RBP6.65□□□□□ -1.35
LINC01538-201ENST00000588074 TCEAL9Q9UHQ7 104 aa6.65□□□□□ -1.35
LINC01538-201ENST00000588074 ST13P50502 369 aaKnown RBP6.64□□□□□ -1.35
LINC01538-201ENST00000588074 MMP16P51512 607 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 DGKZQ13574 1117 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 LONRF3Q496Y0 759 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 ARSHQ5FYA8 562 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 HOMER1Q86YM7 354 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 CCDC24Q8N4L8 307 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 ANKRD20A12PQ8NF67 263 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 TRPM4Q8TD43 1214 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 MYO19Q96H55 970 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 CEP89Q96ST8 783 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 CHMP5Q9NZZ3 219 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 CWC15Q9P013 229 aaKnown RBP6.64□□□□□ -1.35
LINC01538-201ENST00000588074 SCHIP1Q9P0W5 487 aaPredicted RBP6.64□□□□□ -1.35
LINC01538-201ENST00000588074 TNIKQ9UKE5 1360 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 SMAD7O15105 426 aaKnown RBP6.64□□□□□ -1.35
LINC01538-201ENST00000588074 MAP2K2P36507 400 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 MAGEA8P43361 318 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 SOX9P48436 509 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 RABEP1Q15276 862 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 CCDC74AQ96AQ1 378 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 ZFRQ96KR1 1074 aaKnown RBP6.64□□□□□ -1.35
LINC01538-201ENST00000588074 ZSWIM6Q9HCJ5 1215 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 TOMM22Q9NS69 142 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 ETAA1Q9NY74 926 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 CTNNA3Q9UI47 895 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 CD2APQ9Y5K6 639 aa6.64□□□□□ -1.35
LINC01538-201ENST00000588074 NPC1L1Q9UHC9 1359 aa6.63□□□□□ -1.35
LINC01538-201ENST00000588074 ERVH48-1M5A8F1 160 aa6.63□□□□□ -1.35
LINC01538-201ENST00000588074 CTIFO43310 598 aaKnown RBP6.63□□□□□ -1.35
LINC01538-201ENST00000588074 CPNE3O75131 537 aaKnown RBP6.63□□□□□ -1.35
LINC01538-201ENST00000588074 LDHAP00338 332 aaKnown RBP6.63□□□□□ -1.35
LINC01538-201ENST00000588074 USP5P45974 858 aa6.63□□□□□ -1.35
LINC01538-201ENST00000588074 SEPT6Q14141 434 aa6.63□□□□□ -1.35
LINC01538-201ENST00000588074 MCTP2Q6DN12 878 aa6.63□□□□□ -1.35
LINC01538-201ENST00000588074 GAS2L3Q86XJ1 694 aa6.63□□□□□ -1.35
LINC01538-201ENST00000588074 SNRNP27Q8WVK2 155 aaKnown RBP6.63□□□□□ -1.35
LINC01538-201ENST00000588074 MTA3Q9BTC8 594 aa6.63□□□□□ -1.35
LINC01538-201ENST00000588074 DIAPH3Q9NSV4 1193 aa6.63□□□□□ -1.35
LINC01538-201ENST00000588074 ATP8A1Q9Y2Q0 1164 aa6.63□□□□□ -1.35
LINC01538-201ENST00000588074 TOP2AP11388 1531 aaKnown RBP6.63□□□□□ -1.35
LINC01538-201ENST00000588074 MYO1CO00159 1063 aa6.62□□□□□ -1.35
LINC01538-201ENST00000588074 WDHD1O75717 1129 aaPredicted RBP6.62□□□□□ -1.35
LINC01538-201ENST00000588074 RBM5P52756 815 aaKnown RBP eCLIP6.62□□□□□ -1.35
LINC01538-201ENST00000588074 RRP1P56182 461 aaKnown RBP6.62□□□□□ -1.35
LINC01538-201ENST00000588074 EXOSC10Q01780 885 aaKnown RBP6.62□□□□□ -1.35
LINC01538-201ENST00000588074 MAP3K10Q02779 954 aa6.62□□□□□ -1.35
LINC01538-201ENST00000588074 NOLC1Q14978 699 aaKnown RBP eCLIP6.62□□□□□ -1.35
LINC01538-201ENST00000588074 TTC31Q49AM3 519 aaPredicted RBP6.62□□□□□ -1.35
LINC01538-201ENST00000588074 MSS51Q4VC12 460 aa6.62□□□□□ -1.35
LINC01538-201ENST00000588074 C16orf86Q6ZW13 317 aa6.62□□□□□ -1.35
LINC01538-201ENST00000588074 MORC1Q86VD1 984 aa6.62□□□□□ -1.35
LINC01538-201ENST00000588074 TXLNBQ8N3L3 684 aa6.62□□□□□ -1.35
LINC01538-201ENST00000588074 TMX1Q9H3N1 280 aa6.62□□□□□ -1.35
LINC01538-201ENST00000588074 UBP1Q9NZI7 540 aa6.62□□□□□ -1.35
LINC01538-201ENST00000588074 FAM8A1Q9UBU6 413 aa6.62□□□□□ -1.35
LINC01538-201ENST00000588074 PRKAG3Q9UGI9 489 aa6.62□□□□□ -1.35
LINC01538-201ENST00000588074 AXIN2Q9Y2T1 843 aa6.62□□□□□ -1.35
LINC01538-201ENST00000588074 WASLO00401 505 aaPredicted RBP6.62□□□□□ -1.35
LINC01538-201ENST00000588074 BACH1O14867 736 aa6.62□□□□□ -1.35
LINC01538-201ENST00000588074 INHBEP58166 350 aa6.62□□□□□ -1.35
LINC01538-201ENST00000588074 TRAF1Q13077 416 aa6.62□□□□□ -1.35
LINC01538-201ENST00000588074 NFE2Q16621 373 aaPredicted RBP6.62□□□□□ -1.35
LINC01538-201ENST00000588074 ZNF280DQ6N043 979 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms