RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 RTL5Q5HYW3 569 aaPredicted RBP16.7■□□□□ 0.26
SMARCA4-211ENST00000586921 KIAA0825Q8IV33 1275 aa16.7■□□□□ 0.26
SMARCA4-211ENST00000586921 TDHQ8IZJ6 230 aa16.7■□□□□ 0.26
SMARCA4-211ENST00000586921 SEC31BQ9NQW1 1179 aa16.7■□□□□ 0.26
SMARCA4-211ENST00000586921 SRRDQ9UH36 339 aa16.7■□□□□ 0.26
SMARCA4-211ENST00000586921 MUC3AQ02505 3323 aa16.69■□□□□ 0.26
SMARCA4-211ENST00000586921 IRS4O14654 1257 aaPredicted RBP16.69■□□□□ 0.26
SMARCA4-211ENST00000586921 USP2O75604 605 aaPredicted RBP16.69■□□□□ 0.26
SMARCA4-211ENST00000586921 ATP2B4P23634 1241 aa16.69■□□□□ 0.26
SMARCA4-211ENST00000586921 TRIM47Q96LD4 638 aa16.69■□□□□ 0.26
SMARCA4-211ENST00000586921 NUDCQ9Y266 331 aa16.69■□□□□ 0.26
SMARCA4-211ENST00000586921 HOXD10P28358 340 aa16.68■□□□□ 0.26
SMARCA4-211ENST00000586921 NBPF12Q5TAG4 269 aaPredicted RBP16.68■□□□□ 0.26
SMARCA4-211ENST00000586921 CFAP53Q96M91 514 aa16.68■□□□□ 0.26
SMARCA4-211ENST00000586921 RAPGEFL1Q9UHV5 662 aa16.68■□□□□ 0.26
SMARCA4-211ENST00000586921 ZNF804BA4D1E1 1349 aa16.68■□□□□ 0.26
SMARCA4-211ENST00000586921 IRS2Q9Y4H2 1338 aa16.68■□□□□ 0.26
SMARCA4-211ENST00000586921 MED23Q9ULK4 1368 aa16.67■□□□□ 0.26
SMARCA4-211ENST00000586921 ALPK3Q96L96 1907 aa16.67■□□□□ 0.26
SMARCA4-211ENST00000586921 SGPL1O95470 568 aa16.67■□□□□ 0.26
SMARCA4-211ENST00000586921 DLGAP5Q15398 846 aa16.67■□□□□ 0.26
SMARCA4-211ENST00000586921 CNKSR2Q8WXI2 1034 aa16.67■□□□□ 0.26
SMARCA4-211ENST00000586921 FAM122AQ96E09 287 aa16.67■□□□□ 0.26
SMARCA4-211ENST00000586921 GUCD1Q96NT3 240 aa16.67■□□□□ 0.26
SMARCA4-211ENST00000586921 ZMYND8Q9ULU4 1186 aaPredicted RBP16.67■□□□□ 0.26
SMARCA4-211ENST00000586921 PSMC4P43686 418 aa16.66■□□□□ 0.26
SMARCA4-211ENST00000586921 CNGB1Q14028 1251 aaPredicted RBP16.66■□□□□ 0.26
SMARCA4-211ENST00000586921 C7orf61Q8IZ16 206 aa16.66■□□□□ 0.26
SMARCA4-211ENST00000586921 UNC93B1Q9H1C4 597 aa16.66■□□□□ 0.26
SMARCA4-211ENST00000586921 LAMA2P24043 3122 aaKnown RBP16.66■□□□□ 0.26
SMARCA4-211ENST00000586921 MYPNQ86TC9 1320 aa16.66■□□□□ 0.26
SMARCA4-211ENST00000586921 ATP5J2-PTCD1G3V325 749 aa16.65■□□□□ 0.26
SMARCA4-211ENST00000586921 MYO1BO43795 1136 aa16.65■□□□□ 0.26
SMARCA4-211ENST00000586921 OSBPP22059 807 aa16.65■□□□□ 0.26
SMARCA4-211ENST00000586921 CTGFP29279 349 aa16.65■□□□□ 0.26
SMARCA4-211ENST00000586921 HELBQ8NG08 1087 aaPredicted RBP16.65■□□□□ 0.26
SMARCA4-211ENST00000586921 ECM29Q5VYK3 1845 aa16.65■□□□□ 0.26
SMARCA4-211ENST00000586921 FMNL1O95466 1100 aaPredicted RBP16.64■□□□□ 0.25
SMARCA4-211ENST00000586921 TFRCP02786 760 aaKnown RBP16.64■□□□□ 0.25
SMARCA4-211ENST00000586921 MAGEA10P43363 369 aaPredicted RBP16.64■□□□□ 0.25
SMARCA4-211ENST00000586921 TTLL5Q6EMB2 1281 aa16.64■□□□□ 0.25
SMARCA4-211ENST00000586921 SYMPKQ92797 1274 aaKnown RBP16.64■□□□□ 0.25
SMARCA4-211ENST00000586921 ISCA1Q9BUE6 129 aa16.64■□□□□ 0.25
SMARCA4-211ENST00000586921 UBE2OQ9C0C9 1292 aaKnown RBP16.64■□□□□ 0.25
SMARCA4-211ENST00000586921 COA1Q9GZY4 146 aa16.64■□□□□ 0.25
SMARCA4-211ENST00000586921 VEZTQ9HBM0 779 aa16.64■□□□□ 0.25
SMARCA4-211ENST00000586921 ZCCHC17Q9NP64 241 aaKnown RBP16.64■□□□□ 0.25
SMARCA4-211ENST00000586921 DLG5Q8TDM6 1919 aa16.63■□□□□ 0.25
SMARCA4-211ENST00000586921 CLRN2A0PK11 232 aa16.63■□□□□ 0.25
SMARCA4-211ENST00000586921 CAPN2P17655 700 aa16.63■□□□□ 0.25
SMARCA4-211ENST00000586921 CCDC152Q4G0S7 254 aa16.63■□□□□ 0.25
SMARCA4-211ENST00000586921 FAM109BQ6ICB4 259 aaPredicted RBP16.63■□□□□ 0.25
SMARCA4-211ENST00000586921 ANKRD18AQ8IVF6 992 aa16.63■□□□□ 0.25
SMARCA4-211ENST00000586921 FAM161BQ96MY7 647 aa16.63■□□□□ 0.25
SMARCA4-211ENST00000586921 PER1O15534 1290 aaPredicted RBP16.62■□□□□ 0.25
SMARCA4-211ENST00000586921 CETPP11597 493 aa16.62■□□□□ 0.25
SMARCA4-211ENST00000586921 HSP90B1P14625 803 aaKnown RBP16.62■□□□□ 0.25
SMARCA4-211ENST00000586921 SYN1P17600 705 aa16.62■□□□□ 0.25
SMARCA4-211ENST00000586921 VGLL4Q14135 290 aa16.62■□□□□ 0.25
SMARCA4-211ENST00000586921 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.62■□□□□ 0.25
SMARCA4-211ENST00000586921 SLAIN1Q8ND83 568 aa16.62■□□□□ 0.25
SMARCA4-211ENST00000586921 PLBD2Q8NHP8 589 aa16.62■□□□□ 0.25
SMARCA4-211ENST00000586921 PAWRQ96IZ0 340 aaKnown RBP16.62■□□□□ 0.25
SMARCA4-211ENST00000586921 TSPYL4Q9UJ04 414 aa16.62■□□□□ 0.25
SMARCA4-211ENST00000586921 BTBD19C9JJ37 291 aa16.61■□□□□ 0.25
SMARCA4-211ENST00000586921 RASA3Q14644 834 aa16.61■□□□□ 0.25
SMARCA4-211ENST00000586921 NECAB2Q7Z6G3 386 aa16.61■□□□□ 0.25
SMARCA4-211ENST00000586921 MTMR14Q8NCE2 650 aa16.61■□□□□ 0.25
SMARCA4-211ENST00000586921 MAFAQ8NHW3 353 aaPredicted RBP16.61■□□□□ 0.25
SMARCA4-211ENST00000586921 DEFB118Q96PH6 123 aa16.61■□□□□ 0.25
SMARCA4-211ENST00000586921 CPA4Q9UI42 421 aa16.61■□□□□ 0.25
SMARCA4-211ENST00000586921 CSADQ9Y600 493 aa16.61■□□□□ 0.25
SMARCA4-211ENST00000586921 POTEB2H3BUK9 544 aa16.6■□□□□ 0.25
SMARCA4-211ENST00000586921 PRKCZQ05513 592 aa16.6■□□□□ 0.25
SMARCA4-211ENST00000586921 C17orf99Q6UX52 265 aa16.6■□□□□ 0.25
SMARCA4-211ENST00000586921 CCDC85AQ96PX6 553 aaPredicted RBP16.6■□□□□ 0.25
SMARCA4-211ENST00000586921 PCDHAC2Q9Y5I4 1007 aa16.6■□□□□ 0.25
SMARCA4-211ENST00000586921 SPDYE2BA6NHP3 402 aa16.59■□□□□ 0.25
SMARCA4-211ENST00000586921 NEFMP07197 916 aa16.59■□□□□ 0.25
SMARCA4-211ENST00000586921 SPDYE6P0CI01 402 aa16.59■□□□□ 0.25
SMARCA4-211ENST00000586921 HOXD11P31277 338 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-211ENST00000586921 GTF2IP78347 998 aa16.59■□□□□ 0.25
SMARCA4-211ENST00000586921 DIS3LQ8TF46 1054 aaKnown RBP16.59■□□□□ 0.25
SMARCA4-211ENST00000586921 TNFRSF10AO00220 468 aa16.58■□□□□ 0.24
SMARCA4-211ENST00000586921 MAP3K9P80192 1104 aa16.58■□□□□ 0.24
SMARCA4-211ENST00000586921 ZBTB38Q8NAP3 1195 aaPredicted RBP16.58■□□□□ 0.24
SMARCA4-211ENST00000586921 FAM205AQ6ZU69 1335 aa16.58■□□□□ 0.24
SMARCA4-211ENST00000586921 ADGRA2Q96PE1 1338 aa16.58■□□□□ 0.24
SMARCA4-211ENST00000586921 TMEM265A0A087WTH1 108 aa16.57■□□□□ 0.24
SMARCA4-211ENST00000586921 SPDYE5A6NIY4 337 aa16.57■□□□□ 0.24
SMARCA4-211ENST00000586921 CCT4P50991 539 aaKnown RBP16.57■□□□□ 0.24
SMARCA4-211ENST00000586921 SNAPC2Q13487 334 aa16.57■□□□□ 0.24
SMARCA4-211ENST00000586921 TNFAIP1Q13829 316 aa16.57■□□□□ 0.24
SMARCA4-211ENST00000586921 CFAP100Q494V2 611 aa16.57■□□□□ 0.24
SMARCA4-211ENST00000586921 ZNF697Q5TEC3 545 aa16.57■□□□□ 0.24
SMARCA4-211ENST00000586921 TXNRD3Q86VQ6 643 aa16.57■□□□□ 0.24
SMARCA4-211ENST00000586921 ADCY3O60266 1144 aa16.56■□□□□ 0.24
SMARCA4-211ENST00000586921 INHAP05111 366 aa16.56■□□□□ 0.24
SMARCA4-211ENST00000586921 FCGRTP55899 365 aa16.56■□□□□ 0.24
SMARCA4-211ENST00000586921 TRIM28Q13263 835 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms