RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 AP5Z1O43299 807 aa15.5■□□□□ 0.07
CSNK1D-222ENST00000584377 PPFIA3O75145 1194 aa15.5■□□□□ 0.07
CSNK1D-222ENST00000584377 CHMP4CQ96CF2 233 aa15.5■□□□□ 0.07
CSNK1D-222ENST00000584377 SALL1Q9NSC2 1324 aa15.5■□□□□ 0.07
CSNK1D-222ENST00000584377 ABCC12Q96J65 1359 aa15.5■□□□□ 0.07
CSNK1D-222ENST00000584377 FGAP02671 866 aa15.5■□□□□ 0.07
CSNK1D-222ENST00000584377 PUS7LQ9H0K6 701 aaKnown RBP15.5■□□□□ 0.07
CSNK1D-222ENST00000584377 FAM177BA6PVY3 158 aa15.49■□□□□ 0.07
CSNK1D-222ENST00000584377 CYP19A1P11511 503 aaPredicted RBP15.49■□□□□ 0.07
CSNK1D-222ENST00000584377 ADD1P35611 737 aaKnown RBP15.49■□□□□ 0.07
CSNK1D-222ENST00000584377 CTSWP56202 376 aa15.49■□□□□ 0.07
CSNK1D-222ENST00000584377 RBM43Q6ZSC3 357 aaKnown RBP15.49■□□□□ 0.07
CSNK1D-222ENST00000584377 FBXL16Q8N461 479 aa15.49■□□□□ 0.07
CSNK1D-222ENST00000584377 TTC12Q9H892 705 aaPredicted RBP15.49■□□□□ 0.07
CSNK1D-222ENST00000584377 CNNM1Q9NRU3 951 aa15.49■□□□□ 0.07
CSNK1D-222ENST00000584377 ANKRD18BA2A2Z9 1011 aa15.49■□□□□ 0.07
CSNK1D-222ENST00000584377 SPDYE4A6NLX3 237 aa15.49■□□□□ 0.07
CSNK1D-222ENST00000584377 SLC4A9Q96Q91 983 aa15.49■□□□□ 0.07
CSNK1D-222ENST00000584377 IRS4O14654 1257 aaPredicted RBP15.48■□□□□ 0.07
CSNK1D-222ENST00000584377 TRMT112Q9UI30 125 aaKnown RBP15.48■□□□□ 0.07
CSNK1D-222ENST00000584377 ZBTB1Q9Y2K1 713 aa15.48■□□□□ 0.07
CSNK1D-222ENST00000584377 BCL9O00512 1426 aa15.48■□□□□ 0.07
CSNK1D-222ENST00000584377 GPAA1O43292 621 aa15.48■□□□□ 0.07
CSNK1D-222ENST00000584377 MCAMP43121 646 aa15.48■□□□□ 0.07
CSNK1D-222ENST00000584377 EVCP57679 992 aa15.48■□□□□ 0.07
CSNK1D-222ENST00000584377 ANO6Q4KMQ2 910 aa15.48■□□□□ 0.07
CSNK1D-222ENST00000584377 LUZP1Q86V48 1076 aa15.48■□□□□ 0.07
CSNK1D-222ENST00000584377 SYTL4Q96C24 671 aaPredicted RBP15.48■□□□□ 0.07
CSNK1D-222ENST00000584377 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.48■□□□□ 0.07
CSNK1D-222ENST00000584377 GPHNQ9NQX3 736 aaPredicted RBP15.48■□□□□ 0.07
CSNK1D-222ENST00000584377 TAF3Q5VWG9 929 aa15.47■□□□□ 0.07
CSNK1D-222ENST00000584377 FTOQ9C0B1 505 aaKnown RBP eCLIP15.47■□□□□ 0.07
CSNK1D-222ENST00000584377 CARMIL3Q8ND23 1372 aa15.47■□□□□ 0.07
CSNK1D-222ENST00000584377 PRC1O43663 620 aa15.47■□□□□ 0.07
CSNK1D-222ENST00000584377 GUCY1B3Q02153 619 aa15.47■□□□□ 0.07
CSNK1D-222ENST00000584377 PIBF1Q8WXW3 757 aa15.47■□□□□ 0.07
CSNK1D-222ENST00000584377 RCOR1Q9UKL0 485 aa15.47■□□□□ 0.07
CSNK1D-222ENST00000584377 NHSL1Q5SYE7 1610 aa15.47■□□□□ 0.07
CSNK1D-222ENST00000584377 NOLC1Q14978 699 aaKnown RBP eCLIP15.46■□□□□ 0.07
CSNK1D-222ENST00000584377 ZNF396Q96N95 335 aaPredicted RBP15.46■□□□□ 0.07
CSNK1D-222ENST00000584377 USP28Q96RU2 1077 aa15.46■□□□□ 0.07
CSNK1D-222ENST00000584377 ZNF213O14771 459 aa15.46■□□□□ 0.07
CSNK1D-222ENST00000584377 IGSF3O75054 1194 aa15.46■□□□□ 0.07
CSNK1D-222ENST00000584377 ATL3Q6DD88 541 aa15.46■□□□□ 0.07
CSNK1D-222ENST00000584377 RALYLQ86SE5 291 aaKnown RBP15.46■□□□□ 0.07
CSNK1D-222ENST00000584377 MB21D2Q8IYB1 491 aaPredicted RBP15.46■□□□□ 0.07
CSNK1D-222ENST00000584377 NCOA7Q8NI08 942 aa15.46■□□□□ 0.07
CSNK1D-222ENST00000584377 BCL2L12Q9HB09 334 aa15.46■□□□□ 0.07
CSNK1D-222ENST00000584377 CBX8Q9HC52 389 aa15.46■□□□□ 0.07
CSNK1D-222ENST00000584377 DISP2A7MBM2 1401 aa15.46■□□□□ 0.07
CSNK1D-222ENST00000584377 KAT6BQ8WYB5 2073 aa15.46■□□□□ 0.07
CSNK1D-222ENST00000584377 ITGB4P16144 1822 aa15.46■□□□□ 0.07
CSNK1D-222ENST00000584377 FDPSP14324 419 aaKnown RBP15.46■□□□□ 0.06
CSNK1D-222ENST00000584377 ZSCAN25Q6NSZ9 544 aa15.46■□□□□ 0.06
CSNK1D-222ENST00000584377 VGLL2Q8N8G2 317 aa15.46■□□□□ 0.06
CSNK1D-222ENST00000584377 IPO4Q8TEX9 1081 aaKnown RBP15.46■□□□□ 0.06
CSNK1D-222ENST00000584377 SLC9C2Q5TAH2 1124 aa15.45■□□□□ 0.06
CSNK1D-222ENST00000584377 PDCL2Q8N4E4 241 aa15.45■□□□□ 0.06
CSNK1D-222ENST00000584377 ZNF512BQ96KM6 892 aaPredicted RBP15.45■□□□□ 0.06
CSNK1D-222ENST00000584377 TBC1D2BQ9UPU7 963 aa15.45■□□□□ 0.06
CSNK1D-222ENST00000584377 NWD2Q9ULI1 1742 aa15.45■□□□□ 0.06
CSNK1D-222ENST00000584377 KLF18A0A0U1RQI7 1052 aa15.45■□□□□ 0.06
CSNK1D-222ENST00000584377 GOLGA8BA8MQT2 603 aa15.45■□□□□ 0.06
CSNK1D-222ENST00000584377 EXOC5O00471 708 aa15.45■□□□□ 0.06
CSNK1D-222ENST00000584377 DHX16O60231 1041 aaKnown RBP15.45■□□□□ 0.06
CSNK1D-222ENST00000584377 PDE8AO60658 829 aa15.45■□□□□ 0.06
CSNK1D-222ENST00000584377 PDE8BO95263 885 aa15.45■□□□□ 0.06
CSNK1D-222ENST00000584377 ADD2P35612 726 aa15.45■□□□□ 0.06
CSNK1D-222ENST00000584377 TTF1Q15361 905 aaPredicted RBP15.45■□□□□ 0.06
CSNK1D-222ENST00000584377 DZIP3Q86Y13 1208 aaKnown RBP15.45■□□□□ 0.06
CSNK1D-222ENST00000584377 CCAR1Q8IX12 1150 aaKnown RBP15.45■□□□□ 0.06
CSNK1D-222ENST00000584377 SPC24Q8NBT2 197 aa15.45■□□□□ 0.06
CSNK1D-222ENST00000584377 LRP6O75581 1613 aa15.45■□□□□ 0.06
CSNK1D-222ENST00000584377 GOLGA6L6A8MZA4 724 aa15.44■□□□□ 0.06
CSNK1D-222ENST00000584377 ANTXR2P58335 489 aa15.44■□□□□ 0.06
CSNK1D-222ENST00000584377 ILDR1Q86SU0 546 aaPredicted RBP15.44■□□□□ 0.06
CSNK1D-222ENST00000584377 ERVV-1B6SEH8 477 aa15.43■□□□□ 0.06
CSNK1D-222ENST00000584377 IDH1O75874 414 aaKnown RBP15.43■□□□□ 0.06
CSNK1D-222ENST00000584377 TPM3P06753 285 aa15.43■□□□□ 0.06
CSNK1D-222ENST00000584377 IL6STP40189 918 aaPredicted RBP15.43■□□□□ 0.06
CSNK1D-222ENST00000584377 ZNF165P49910 485 aa15.43■□□□□ 0.06
CSNK1D-222ENST00000584377 DNAJC25Q9H1X3 360 aa15.43■□□□□ 0.06
CSNK1D-222ENST00000584377 CGNQ9P2M7 1197 aaKnown RBP15.43■□□□□ 0.06
CSNK1D-222ENST00000584377 VGLL3A8MV65 326 aa15.43■□□□□ 0.06
CSNK1D-222ENST00000584377 CCDC102BQ68D86 513 aa15.43■□□□□ 0.06
CSNK1D-222ENST00000584377 CCDC73Q6ZRK6 1079 aa15.43■□□□□ 0.06
CSNK1D-222ENST00000584377 PIH1D3Q9NQM4 214 aaKnown RBP15.43■□□□□ 0.06
CSNK1D-222ENST00000584377 HPS5Q9UPZ3 1129 aa15.43■□□□□ 0.06
CSNK1D-222ENST00000584377 UBN2Q6ZU65 1347 aa15.43■□□□□ 0.06
CSNK1D-222ENST00000584377 ME1P48163 572 aa15.42■□□□□ 0.06
CSNK1D-222ENST00000584377 TRDNQ13061 729 aa15.42■□□□□ 0.06
CSNK1D-222ENST00000584377 GOLPH3LQ9H4A5 285 aa15.42■□□□□ 0.06
CSNK1D-222ENST00000584377 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.42■□□□□ 0.06
CSNK1D-222ENST00000584377 CPLX1O14810 134 aa15.42■□□□□ 0.06
CSNK1D-222ENST00000584377 CTAGE5O15320 804 aa15.42■□□□□ 0.06
CSNK1D-222ENST00000584377 PHKA1P46020 1223 aa15.42■□□□□ 0.06
CSNK1D-222ENST00000584377 RAB11FIP4Q86YS3 637 aa15.42■□□□□ 0.06
CSNK1D-222ENST00000584377 C17orf53Q8N3J3 647 aaPredicted RBP15.42■□□□□ 0.06
CSNK1D-222ENST00000584377 C8orf76Q96K31 380 aa15.42■□□□□ 0.06
CSNK1D-222ENST00000584377 WDR19Q8NEZ3 1342 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms