RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 FBXW7Q969H0 707 aa9.9□□□□□ -0.82
CCDC47-205ENST00000582331 MXD3Q9BW11 206 aa9.9□□□□□ -0.82
CCDC47-205ENST00000582331 HYPKQ9NX55 129 aa9.9□□□□□ -0.82
CCDC47-205ENST00000582331 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.9□□□□□ -0.82
CCDC47-205ENST00000582331 HTTP42858 3142 aa9.9□□□□□ -0.82
CCDC47-205ENST00000582331 PSME4Q14997 1843 aa9.89□□□□□ -0.83
CCDC47-205ENST00000582331 MYO3BQ8WXR4 1341 aa9.89□□□□□ -0.83
CCDC47-205ENST00000582331 CHL1O00533 1208 aa9.89□□□□□ -0.83
CCDC47-205ENST00000582331 PDE8AO60658 829 aa9.89□□□□□ -0.83
CCDC47-205ENST00000582331 SASH1O94885 1247 aa9.89□□□□□ -0.83
CCDC47-205ENST00000582331 TMPOP42166 694 aaKnown RBP9.89□□□□□ -0.83
CCDC47-205ENST00000582331 STRIP1Q5VSL9 837 aa9.89□□□□□ -0.83
CCDC47-205ENST00000582331 RIC3Q7Z5B4 369 aa9.89□□□□□ -0.83
CCDC47-205ENST00000582331 ARMC5Q96C12 935 aa9.89□□□□□ -0.83
CCDC47-205ENST00000582331 CCDC85AQ96PX6 553 aaPredicted RBP9.89□□□□□ -0.83
CCDC47-205ENST00000582331 EFCC1Q9HA90 598 aa9.89□□□□□ -0.83
CCDC47-205ENST00000582331 LAS1LQ9Y4W2 734 aaKnown RBP9.89□□□□□ -0.83
CCDC47-205ENST00000582331 CENPFP49454 3210 aa9.88□□□□□ -0.83
CCDC47-205ENST00000582331 HOXB7P09629 217 aa9.88□□□□□ -0.83
CCDC47-205ENST00000582331 ZBTB48P10074 688 aaPredicted RBP9.88□□□□□ -0.83
CCDC47-205ENST00000582331 OTUD7BQ6GQQ9 843 aa9.88□□□□□ -0.83
CCDC47-205ENST00000582331 CD99L2Q8TCZ2 262 aa9.88□□□□□ -0.83
CCDC47-205ENST00000582331 WNK4Q96J92 1243 aa9.88□□□□□ -0.83
CCDC47-205ENST00000582331 MED23Q9ULK4 1368 aa9.88□□□□□ -0.83
CCDC47-205ENST00000582331 WTIPA6NIX2 430 aaPredicted RBP9.87□□□□□ -0.83
CCDC47-205ENST00000582331 IGF2BP3O00425 579 aaKnown RBP eCLIP9.87□□□□□ -0.83
CCDC47-205ENST00000582331 PPP1R12BO60237 982 aaPredicted RBP9.87□□□□□ -0.83
CCDC47-205ENST00000582331 PCCAP05165 728 aaPredicted RBP9.87□□□□□ -0.83
CCDC47-205ENST00000582331 SP3Q02447 781 aa9.87□□□□□ -0.83
CCDC47-205ENST00000582331 TTLL5Q6EMB2 1281 aa9.87□□□□□ -0.83
CCDC47-205ENST00000582331 CCDC191Q8NCU4 936 aa9.87□□□□□ -0.83
CCDC47-205ENST00000582331 JARID2Q92833 1246 aaPredicted RBP9.87□□□□□ -0.83
CCDC47-205ENST00000582331 CDC5LQ99459 802 aaKnown RBP9.87□□□□□ -0.83
CCDC47-205ENST00000582331 MYD88Q99836 296 aa9.87□□□□□ -0.83
CCDC47-205ENST00000582331 COA1Q9GZY4 146 aa9.87□□□□□ -0.83
CCDC47-205ENST00000582331 DEFB129Q9H1M3 183 aa9.87□□□□□ -0.83
CCDC47-205ENST00000582331 FZD1Q9UP38 647 aa9.87□□□□□ -0.83
CCDC47-205ENST00000582331 RBBP6Q7Z6E9 1792 aaKnown RBP9.86□□□□□ -0.83
CCDC47-205ENST00000582331 UNCXA6NJT0 531 aa9.86□□□□□ -0.83
CCDC47-205ENST00000582331 CCT4P50991 539 aaKnown RBP9.86□□□□□ -0.83
CCDC47-205ENST00000582331 CRHR2Q13324 411 aa9.86□□□□□ -0.83
CCDC47-205ENST00000582331 ARHGEF6Q15052 776 aa9.86□□□□□ -0.83
CCDC47-205ENST00000582331 NEUROD2Q15784 382 aa9.86□□□□□ -0.83
CCDC47-205ENST00000582331 MAP3K11Q16584 847 aa9.86□□□□□ -0.83
CCDC47-205ENST00000582331 NBPF11Q86T75 865 aa9.86□□□□□ -0.83
CCDC47-205ENST00000582331 KIAA0825Q8IV33 1275 aa9.86□□□□□ -0.83
CCDC47-205ENST00000582331 ZBED3Q96IU2 234 aaPredicted RBP9.86□□□□□ -0.83
CCDC47-205ENST00000582331 CLMNQ96JQ2 1002 aa9.86□□□□□ -0.83
CCDC47-205ENST00000582331 CWC25Q9NXE8 425 aaPredicted RBP9.86□□□□□ -0.83
CCDC47-205ENST00000582331 MINPP1Q9UNW1 487 aa9.86□□□□□ -0.83
CCDC47-205ENST00000582331 RIOK3O14730 519 aaKnown RBP9.85□□□□□ -0.83
CCDC47-205ENST00000582331 DLGAP5Q15398 846 aa9.85□□□□□ -0.83
CCDC47-205ENST00000582331 SLC4A8Q2Y0W8 1093 aa9.85□□□□□ -0.83
CCDC47-205ENST00000582331 SUPT20HL1Q3ZLR7 823 aa9.85□□□□□ -0.83
CCDC47-205ENST00000582331 DUSP27Q5VZP5 1158 aa9.85□□□□□ -0.83
CCDC47-205ENST00000582331 PDCD7Q8N8D1 485 aaKnown RBP9.85□□□□□ -0.83
CCDC47-205ENST00000582331 ZNF333Q96JL9 665 aa9.85□□□□□ -0.83
CCDC47-205ENST00000582331 BSDC1Q9NW68 430 aaPredicted RBP9.85□□□□□ -0.83
CCDC47-205ENST00000582331 LEMD3Q9Y2U8 911 aa9.85□□□□□ -0.83
CCDC47-205ENST00000582331 COL1A1P02452 1464 aaPredicted RBP9.85□□□□□ -0.83
CCDC47-205ENST00000582331 TESPA1A2RU30 521 aaPredicted RBP9.84□□□□□ -0.83
CCDC47-205ENST00000582331 H0YGN5 161 aa9.84□□□□□ -0.83
CCDC47-205ENST00000582331 GTF2IP78347 998 aa9.84□□□□□ -0.83
CCDC47-205ENST00000582331 SLC9C1Q4G0N8 1177 aa9.84□□□□□ -0.83
CCDC47-205ENST00000582331 TXNRD3Q86VQ6 643 aa9.84□□□□□ -0.83
CCDC47-205ENST00000582331 PHAXQ9H814 394 aaKnown RBP9.84□□□□□ -0.83
CCDC47-205ENST00000582331 PPP2R3BQ9Y5P8 575 aa9.84□□□□□ -0.83
CCDC47-205ENST00000582331 BRCA2P51587 3418 aa9.83□□□□□ -0.84
CCDC47-205ENST00000582331 DLL1O00548 723 aa9.83□□□□□ -0.84
CCDC47-205ENST00000582331 IREB2P48200 963 aaKnown RBP9.83□□□□□ -0.84
CCDC47-205ENST00000582331 CTSWP56202 376 aa9.83□□□□□ -0.84
CCDC47-205ENST00000582331 CAP1Q01518 475 aa9.83□□□□□ -0.84
CCDC47-205ENST00000582331 SLAIN1Q8ND83 568 aa9.83□□□□□ -0.84
CCDC47-205ENST00000582331 TTLL11Q8NHH1 800 aa9.83□□□□□ -0.84
CCDC47-205ENST00000582331 PTPN18Q99952 460 aa9.83□□□□□ -0.84
CCDC47-205ENST00000582331 TAOK2Q9UL54 1235 aa9.83□□□□□ -0.84
CCDC47-205ENST00000582331 ZNF804BA4D1E1 1349 aa9.82□□□□□ -0.84
CCDC47-205ENST00000582331 MYO1BO43795 1136 aa9.82□□□□□ -0.84
CCDC47-205ENST00000582331 USP2O75604 605 aaPredicted RBP9.82□□□□□ -0.84
CCDC47-205ENST00000582331 GJA5P36382 358 aa9.82□□□□□ -0.84
CCDC47-205ENST00000582331 NBPF12Q5TAG4 269 aaPredicted RBP9.82□□□□□ -0.84
CCDC47-205ENST00000582331 CCDC146Q8IYE0 955 aa9.82□□□□□ -0.84
CCDC47-205ENST00000582331 ANKRD13AQ8IZ07 590 aa9.82□□□□□ -0.84
CCDC47-205ENST00000582331 MTMR14Q8NCE2 650 aa9.82□□□□□ -0.84
CCDC47-205ENST00000582331 METTL22Q9BUU2 404 aaPredicted RBP9.82□□□□□ -0.84
CCDC47-205ENST00000582331 ANKRD2Q9GZV1 360 aa9.82□□□□□ -0.84
CCDC47-205ENST00000582331 GREM2Q9H772 168 aa9.82□□□□□ -0.84
CCDC47-205ENST00000582331 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.82□□□□□ -0.84
CCDC47-205ENST00000582331 PTCH2Q9Y6C5 1203 aa9.82□□□□□ -0.84
CCDC47-205ENST00000582331 ZNF646O15015 1829 aaPredicted RBP9.82□□□□□ -0.84
CCDC47-205ENST00000582331 SSC5DA1L4H1 1573 aa9.81□□□□□ -0.84
CCDC47-205ENST00000582331 KIAA0100Q14667 2235 aaKnown RBP9.81□□□□□ -0.84
CCDC47-205ENST00000582331 CLRN2A0PK11 232 aa9.81□□□□□ -0.84
CCDC47-205ENST00000582331 DDX58O95786 925 aaKnown RBP9.81□□□□□ -0.84
CCDC47-205ENST00000582331 MYCP01106 439 aaPredicted RBP9.81□□□□□ -0.84
CCDC47-205ENST00000582331 IGHMBP2P38935 993 aaKnown RBP9.81□□□□□ -0.84
CCDC47-205ENST00000582331 SLC17A8Q8NDX2 589 aa9.81□□□□□ -0.84
CCDC47-205ENST00000582331 VEZTQ9HBM0 779 aa9.81□□□□□ -0.84
CCDC47-205ENST00000582331 ZFYVE28Q9HCC9 887 aa9.81□□□□□ -0.84
CCDC47-205ENST00000582331 CD209Q9NNX6 404 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms