RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 GPR108Q9NPR9 543 aa15.68■□□□□ 0.1
SNORD55-201ENST00000581525 COG6Q9Y2V7 657 aa15.68■□□□□ 0.1
SNORD55-201ENST00000581525 ATP2B3Q16720 1220 aa15.67■□□□□ 0.1
SNORD55-201ENST00000581525 TBC1D10BQ4KMP7 808 aaPredicted RBP15.67■□□□□ 0.1
SNORD55-201ENST00000581525 MRIQ9BWK5 157 aa15.67■□□□□ 0.1
SNORD55-201ENST00000581525 MYOZ2Q9NPC6 264 aa15.67■□□□□ 0.1
SNORD55-201ENST00000581525 AKAP2Q9Y2D5 859 aa15.67■□□□□ 0.1
SNORD55-201ENST00000581525 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.67■□□□□ 0.1
SNORD55-201ENST00000581525 TFCP2Q12800 502 aa15.66■□□□□ 0.1
SNORD55-201ENST00000581525 G3BP1Q13283 466 aaKnown RBP eCLIP15.66■□□□□ 0.1
SNORD55-201ENST00000581525 KIF4BQ2VIQ3 1234 aa15.66■□□□□ 0.1
SNORD55-201ENST00000581525 CDC37L1Q7L3B6 337 aa15.66■□□□□ 0.1
SNORD55-201ENST00000581525 OGFOD1Q8N543 542 aa15.66■□□□□ 0.1
SNORD55-201ENST00000581525 PITPNM2Q9BZ72 1349 aa15.66■□□□□ 0.1
SNORD55-201ENST00000581525 TIMM10P62072 90 aa15.65■□□□□ 0.1
SNORD55-201ENST00000581525 SIRT2Q8IXJ6 389 aa15.65■□□□□ 0.1
SNORD55-201ENST00000581525 C1orf115Q9H7X2 142 aa15.65■□□□□ 0.1
SNORD55-201ENST00000581525 CREBZFQ9NS37 354 aa15.65■□□□□ 0.1
SNORD55-201ENST00000581525 SUGT1Q9Y2Z0 365 aa15.65■□□□□ 0.1
SNORD55-201ENST00000581525 A0A1B0GUL7 405 aa15.64■□□□□ 0.09
SNORD55-201ENST00000581525 WNT10BO00744 389 aa15.64■□□□□ 0.09
SNORD55-201ENST00000581525 SEMA3EO15041 775 aa15.64■□□□□ 0.09
SNORD55-201ENST00000581525 HDLBPQ00341 1268 aaKnown RBP15.64■□□□□ 0.09
SNORD55-201ENST00000581525 SCARF1Q14162 830 aa15.64■□□□□ 0.09
SNORD55-201ENST00000581525 VPS37DQ86XT2 251 aa15.64■□□□□ 0.09
SNORD55-201ENST00000581525 TBC1D22AQ8WUA7 517 aa15.64■□□□□ 0.09
SNORD55-201ENST00000581525 YTHDC1Q96MU7 727 aaKnown RBP15.64■□□□□ 0.09
SNORD55-201ENST00000581525 HDAC9Q9UKV0 1011 aa15.64■□□□□ 0.09
SNORD55-201ENST00000581525 PDS5AQ29RF7 1337 aaKnown RBP15.64■□□□□ 0.09
SNORD55-201ENST00000581525 RBM26Q5T8P6 1007 aaKnown RBP15.63■□□□□ 0.09
SNORD55-201ENST00000581525 CST9Q5W186 159 aa15.63■□□□□ 0.09
SNORD55-201ENST00000581525 KIAA0825Q8IV33 1275 aa15.63■□□□□ 0.09
SNORD55-201ENST00000581525 TMEM88BA6NKF7 163 aa15.62■□□□□ 0.09
SNORD55-201ENST00000581525 SURF6O75683 361 aaKnown RBP15.62■□□□□ 0.09
SNORD55-201ENST00000581525 RRP1P56182 461 aaKnown RBP15.62■□□□□ 0.09
SNORD55-201ENST00000581525 NBPF9Q3BBW0 867 aa15.62■□□□□ 0.09
SNORD55-201ENST00000581525 MFSD14BQ5SR56 506 aa15.62■□□□□ 0.09
SNORD55-201ENST00000581525 CCDC102BQ68D86 513 aa15.62■□□□□ 0.09
SNORD55-201ENST00000581525 WDR66Q8TBY9 1149 aa15.62■□□□□ 0.09
SNORD55-201ENST00000581525 DCPSQ96C86 337 aaKnown RBP15.62■□□□□ 0.09
SNORD55-201ENST00000581525 XAGE2Q96GT9 111 aa15.62■□□□□ 0.09
SNORD55-201ENST00000581525 GLIS2Q9BZE0 524 aaPredicted RBP15.62■□□□□ 0.09
SNORD55-201ENST00000581525 SERPINA10Q9UK55 444 aa15.62■□□□□ 0.09
SNORD55-201ENST00000581525 SALL1Q9NSC2 1324 aa15.62■□□□□ 0.09
SNORD55-201ENST00000581525 ADORA1P30542 326 aa15.61■□□□□ 0.09
SNORD55-201ENST00000581525 PHKA1P46020 1223 aa15.61■□□□□ 0.09
SNORD55-201ENST00000581525 FMR1Q06787 632 aaKnown RBP eCLIP15.61■□□□□ 0.09
SNORD55-201ENST00000581525 FBXW7Q969H0 707 aa15.61■□□□□ 0.09
SNORD55-201ENST00000581525 GNL3LQ9NVN8 582 aaKnown RBP15.61■□□□□ 0.09
SNORD55-201ENST00000581525 DENND2AQ9ULE3 1009 aa15.61■□□□□ 0.09
SNORD55-201ENST00000581525 ASTN2O75129 1339 aaPredicted RBP15.61■□□□□ 0.09
SNORD55-201ENST00000581525 SPDYE2BA6NHP3 402 aa15.6■□□□□ 0.09
SNORD55-201ENST00000581525 TRAF5O00463 557 aa15.6■□□□□ 0.09
SNORD55-201ENST00000581525 SPDYE6P0CI01 402 aa15.6■□□□□ 0.09
SNORD55-201ENST00000581525 GRIK5Q16478 980 aa15.6■□□□□ 0.09
SNORD55-201ENST00000581525 HSP90AB4PQ58FF6 505 aa15.6■□□□□ 0.09
SNORD55-201ENST00000581525 KRT26Q7Z3Y9 468 aa15.6■□□□□ 0.09
SNORD55-201ENST00000581525 USP48Q86UV5 1035 aa15.6■□□□□ 0.09
SNORD55-201ENST00000581525 ZNF512BQ96KM6 892 aaPredicted RBP15.6■□□□□ 0.09
SNORD55-201ENST00000581525 GGA3Q9NZ52 723 aa15.6■□□□□ 0.09
SNORD55-201ENST00000581525 IQSEC3Q9UPP2 1182 aaPredicted RBP15.6■□□□□ 0.09
SNORD55-201ENST00000581525 RASSF10A6NK89 507 aa15.59■□□□□ 0.09
SNORD55-201ENST00000581525 HMMRO75330 724 aa15.59■□□□□ 0.09
SNORD55-201ENST00000581525 ARID4AP29374 1257 aaPredicted RBP15.59■□□□□ 0.09
SNORD55-201ENST00000581525 HTRA3P83110 453 aa15.59■□□□□ 0.09
SNORD55-201ENST00000581525 DLGAP5Q15398 846 aa15.59■□□□□ 0.09
SNORD55-201ENST00000581525 TNNI3KQ59H18 835 aa15.59■□□□□ 0.09
SNORD55-201ENST00000581525 ANGEL2Q5VTE6 544 aaKnown RBP15.59■□□□□ 0.09
SNORD55-201ENST00000581525 JMYQ8N9B5 988 aa15.59■□□□□ 0.09
SNORD55-201ENST00000581525 KLRG1Q96E93 195 aa15.59■□□□□ 0.09
SNORD55-201ENST00000581525 HHIPL1Q96JK4 782 aa15.59■□□□□ 0.09
SNORD55-201ENST00000581525 PRMT6Q96LA8 375 aaPredicted RBP15.59■□□□□ 0.09
SNORD55-201ENST00000581525 FPGT-TNNI3KV9GXZ4 949 aa15.59■□□□□ 0.09
SNORD55-201ENST00000581525 ARAP2Q8WZ64 1704 aa15.59■□□□□ 0.09
SNORD55-201ENST00000581525 COL1A1P02452 1464 aaPredicted RBP15.59■□□□□ 0.09
SNORD55-201ENST00000581525 FRAT2O75474 233 aaPredicted RBP15.58■□□□□ 0.08
SNORD55-201ENST00000581525 CFAP100Q494V2 611 aa15.58■□□□□ 0.08
SNORD55-201ENST00000581525 HHIPL2Q6UWX4 724 aa15.58■□□□□ 0.08
SNORD55-201ENST00000581525 ERC1Q8IUD2 1116 aa15.58■□□□□ 0.08
SNORD55-201ENST00000581525 TTF2Q9UNY4 1162 aaKnown RBP15.58■□□□□ 0.08
SNORD55-201ENST00000581525 JAG2Q9Y219 1238 aa15.58■□□□□ 0.08
SNORD55-201ENST00000581525 PCNTO95613 3336 aa15.58■□□□□ 0.08
SNORD55-201ENST00000581525 IGSF3O75054 1194 aa15.57■□□□□ 0.08
SNORD55-201ENST00000581525 RAB11FIP3O75154 756 aa15.57■□□□□ 0.08
SNORD55-201ENST00000581525 CHAF1AQ13111 956 aaPredicted RBP15.57■□□□□ 0.08
SNORD55-201ENST00000581525 RASGRF1Q13972 1273 aa15.57■□□□□ 0.08
SNORD55-201ENST00000581525 SULF1Q8IWU6 871 aa15.57■□□□□ 0.08
SNORD55-201ENST00000581525 NEUROD6Q96NK8 337 aa15.57■□□□□ 0.08
SNORD55-201ENST00000581525 TLL2Q9Y6L7 1015 aa15.57■□□□□ 0.08
SNORD55-201ENST00000581525 CRKP46108 304 aa15.56■□□□□ 0.08
SNORD55-201ENST00000581525 EAF2Q96CJ1 260 aaPredicted RBP15.56■□□□□ 0.08
SNORD55-201ENST00000581525 FAM163AQ96GL9 167 aaPredicted RBP15.56■□□□□ 0.08
SNORD55-201ENST00000581525 ZDHHC15Q96MV8 337 aa15.56■□□□□ 0.08
SNORD55-201ENST00000581525 PCDHAC2Q9Y5I4 1007 aa15.56■□□□□ 0.08
SNORD55-201ENST00000581525 MAST3O60307 1309 aa15.56■□□□□ 0.08
SNORD55-201ENST00000581525 CNTNAP1P78357 1384 aa15.56■□□□□ 0.08
SNORD55-201ENST00000581525 POLR2AP24928 1970 aaKnown RBP15.56■□□□□ 0.08
SNORD55-201ENST00000581525 ADM5C9JUS6 153 aa15.55■□□□□ 0.08
SNORD55-201ENST00000581525 F8W031 263 aaPredicted RBP15.55■□□□□ 0.08
SNORD55-201ENST00000581525 CELF2O95319 508 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms