RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 ATP8B2P98198 1209 aa25.01■■□□□ 1.59
SS18-218ENST00000581021 ATP2B3Q16720 1220 aa25.01■■□□□ 1.59
SS18-218ENST00000581021 SSH3Q8TE77 659 aa25.01■■□□□ 1.59
SS18-218ENST00000581021 ARAP2Q8WZ64 1704 aa25■■□□□ 1.59
SS18-218ENST00000581021 IFIT1P09914 478 aaKnown RBP25■■□□□ 1.59
SS18-218ENST00000581021 SLC5A1P13866 664 aa25■■□□□ 1.59
SS18-218ENST00000581021 ADORA1P30542 326 aa25■■□□□ 1.59
SS18-218ENST00000581021 TFCP2Q12800 502 aa25■■□□□ 1.59
SS18-218ENST00000581021 CEP85Q6P2H3 762 aa25■■□□□ 1.59
SS18-218ENST00000581021 GGA3Q9NZ52 723 aa25■■□□□ 1.59
SS18-218ENST00000581021 MS4A1P11836 297 aa24.99■■□□□ 1.59
SS18-218ENST00000581021 SCARF1Q14162 830 aa24.99■■□□□ 1.59
SS18-218ENST00000581021 GRIK5Q16478 980 aa24.99■■□□□ 1.59
SS18-218ENST00000581021 NBPF9Q3BBW0 867 aa24.99■■□□□ 1.59
SS18-218ENST00000581021 CREBZFQ9NS37 354 aa24.99■■□□□ 1.59
SS18-218ENST00000581021 PCDHAC2Q9Y5I4 1007 aa24.99■■□□□ 1.59
SS18-218ENST00000581021 ADM5C9JUS6 153 aa24.98■■□□□ 1.59
SS18-218ENST00000581021 FKBP1AP62942 108 aaKnown RBP24.98■■□□□ 1.59
SS18-218ENST00000581021 CAVIN4Q5BKX8 364 aa24.98■■□□□ 1.59
SS18-218ENST00000581021 CST9Q5W186 159 aa24.98■■□□□ 1.59
SS18-218ENST00000581021 USP48Q86UV5 1035 aa24.98■■□□□ 1.59
SS18-218ENST00000581021 VPS37DQ86XT2 251 aa24.98■■□□□ 1.59
SS18-218ENST00000581021 ZBED3Q96IU2 234 aaPredicted RBP24.98■■□□□ 1.59
SS18-218ENST00000581021 AOX1Q06278 1338 aa24.97■■□□□ 1.59
SS18-218ENST00000581021 F8W031 263 aaPredicted RBP24.97■■□□□ 1.59
SS18-218ENST00000581021 MFSD14BQ5SR56 506 aa24.97■■□□□ 1.59
SS18-218ENST00000581021 ZBTB40Q9NUA8 1239 aa24.97■■□□□ 1.59
SS18-218ENST00000581021 TMEM88BA6NKF7 163 aa24.96■■□□□ 1.59
SS18-218ENST00000581021 WNT10BO00744 389 aa24.96■■□□□ 1.59
SS18-218ENST00000581021 CHAF1AQ13111 956 aaPredicted RBP24.96■■□□□ 1.59
SS18-218ENST00000581021 ANGEL2Q5VTE6 544 aaKnown RBP24.96■■□□□ 1.59
SS18-218ENST00000581021 OGFOD1Q8N543 542 aa24.96■■□□□ 1.59
SS18-218ENST00000581021 SCAF8Q9UPN6 1271 aaKnown RBP24.96■■□□□ 1.59
SS18-218ENST00000581021 POLR2AP24928 1970 aaKnown RBP24.95■■□□□ 1.58
SS18-218ENST00000581021 PHKA1P46020 1223 aa24.95■■□□□ 1.58
SS18-218ENST00000581021 TIMM10P62072 90 aa24.95■■□□□ 1.58
SS18-218ENST00000581021 PDE3AQ14432 1141 aa24.95■■□□□ 1.58
SS18-218ENST00000581021 CDC37L1Q7L3B6 337 aa24.95■■□□□ 1.58
SS18-218ENST00000581021 KRT26Q7Z3Y9 468 aa24.95■■□□□ 1.58
SS18-218ENST00000581021 DDX19BQ9UMR2 479 aa24.95■■□□□ 1.58
SS18-218ENST00000581021 TRPM7Q96QT4 1865 aa24.94■■□□□ 1.58
SS18-218ENST00000581021 A0A1B0GUL7 405 aa24.94■■□□□ 1.58
SS18-218ENST00000581021 KLRG1Q96E93 195 aa24.94■■□□□ 1.58
SS18-218ENST00000581021 PCNTO95613 3336 aa24.92■■□□□ 1.58
SS18-218ENST00000581021 G3BP1Q13283 466 aaKnown RBP eCLIP24.92■■□□□ 1.58
SS18-218ENST00000581021 SIRT2Q8IXJ6 389 aa24.92■■□□□ 1.58
SS18-218ENST00000581021 DCPSQ96C86 337 aaKnown RBP24.92■■□□□ 1.58
SS18-218ENST00000581021 HDAC9Q9UKV0 1011 aa24.92■■□□□ 1.58
SS18-218ENST00000581021 NOP58Q9Y2X3 529 aaKnown RBP24.92■■□□□ 1.58
SS18-218ENST00000581021 SURF6O75683 361 aaKnown RBP24.91■■□□□ 1.58
SS18-218ENST00000581021 CELF2O95319 508 aaKnown RBP24.91■■□□□ 1.58
SS18-218ENST00000581021 CCDC102BQ68D86 513 aa24.91■■□□□ 1.58
SS18-218ENST00000581021 XAGE2Q96GT9 111 aa24.91■■□□□ 1.58
SS18-218ENST00000581021 MKRN1Q9UHC7 482 aaKnown RBP24.91■■□□□ 1.58
SS18-218ENST00000581021 FRAT2O75474 233 aaPredicted RBP24.9■■□□□ 1.58
SS18-218ENST00000581021 MMP14P50281 582 aa24.9■■□□□ 1.58
SS18-218ENST00000581021 CFAP100Q494V2 611 aa24.9■■□□□ 1.58
SS18-218ENST00000581021 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.9■■□□□ 1.58
SS18-218ENST00000581021 MTMR14Q8NCE2 650 aa24.9■■□□□ 1.58
SS18-218ENST00000581021 TTF2Q9UNY4 1162 aaKnown RBP24.9■■□□□ 1.58
SS18-218ENST00000581021 CNTNAP1P78357 1384 aa24.9■■□□□ 1.58
SS18-218ENST00000581021 MYH13Q9UKX3 1938 aa24.9■■□□□ 1.58
SS18-218ENST00000581021 PITPNM2Q9BZ72 1349 aa24.89■■□□□ 1.58
SS18-218ENST00000581021 SULF1Q8IWU6 871 aa24.89■■□□□ 1.58
SS18-218ENST00000581021 ZNF408Q9H9D4 720 aa24.89■■□□□ 1.58
SS18-218ENST00000581021 SPDYE2BA6NHP3 402 aa24.88■■□□□ 1.57
SS18-218ENST00000581021 SPDYE6P0CI01 402 aa24.88■■□□□ 1.57
SS18-218ENST00000581021 RRP1P56182 461 aaKnown RBP24.88■■□□□ 1.57
SS18-218ENST00000581021 DLGAP5Q15398 846 aa24.88■■□□□ 1.57
SS18-218ENST00000581021 PRMT6Q96LA8 375 aaPredicted RBP24.88■■□□□ 1.57
SS18-218ENST00000581021 AKAP2Q9Y2D5 859 aa24.88■■□□□ 1.57
SS18-218ENST00000581021 RASSF10A6NK89 507 aa24.87■■□□□ 1.57
SS18-218ENST00000581021 RASGRF1Q13972 1273 aa24.87■■□□□ 1.57
SS18-218ENST00000581021 TBC1D22AQ8WUA7 517 aa24.87■■□□□ 1.57
SS18-218ENST00000581021 CDCA5Q96FF9 252 aa24.87■■□□□ 1.57
SS18-218ENST00000581021 EXOC6BQ9Y2D4 811 aa24.87■■□□□ 1.57
SS18-218ENST00000581021 OS9Q13438 667 aaPredicted RBP24.86■■□□□ 1.57
SS18-218ENST00000581021 NEUROD6Q96NK8 337 aa24.86■■□□□ 1.57
SS18-218ENST00000581021 ABT1Q9ULW3 272 aaKnown RBP24.86■■□□□ 1.57
SS18-218ENST00000581021 ZBTB22O15209 634 aa24.85■■□□□ 1.57
SS18-218ENST00000581021 TNNI3KQ59H18 835 aa24.85■■□□□ 1.57
SS18-218ENST00000581021 PRAMEF18Q5VWM3 479 aa24.85■■□□□ 1.57
SS18-218ENST00000581021 JMYQ8N9B5 988 aa24.85■■□□□ 1.57
SS18-218ENST00000581021 SERPINA10Q9UK55 444 aa24.85■■□□□ 1.57
SS18-218ENST00000581021 TLL2Q9Y6L7 1015 aa24.85■■□□□ 1.57
SS18-218ENST00000581021 FPGT-TNNI3KV9GXZ4 949 aa24.85■■□□□ 1.57
SS18-218ENST00000581021 ECM29Q5VYK3 1845 aa24.84■■□□□ 1.57
SS18-218ENST00000581021 CLRN2A0PK11 232 aa24.84■■□□□ 1.57
SS18-218ENST00000581021 CRKP46108 304 aa24.84■■□□□ 1.57
SS18-218ENST00000581021 SAPCD2Q86UD0 394 aa24.84■■□□□ 1.57
SS18-218ENST00000581021 RPAP2Q8IXW5 612 aaPredicted RBP24.84■■□□□ 1.57
SS18-218ENST00000581021 GPR108Q9NPR9 543 aa24.84■■□□□ 1.57
SS18-218ENST00000581021 GNL3LQ9NVN8 582 aaKnown RBP24.84■■□□□ 1.57
SS18-218ENST00000581021 SEMA3EO15041 775 aa24.83■■□□□ 1.57
SS18-218ENST00000581021 PRDX5P30044 214 aa24.83■■□□□ 1.57
SS18-218ENST00000581021 VEGFBP49765 207 aa24.83■■□□□ 1.57
SS18-218ENST00000581021 PI16Q6UXB8 463 aa24.83■■□□□ 1.57
SS18-218ENST00000581021 WDR66Q8TBY9 1149 aa24.83■■□□□ 1.57
SS18-218ENST00000581021 DBNDD2Q9BQY9 259 aa24.83■■□□□ 1.57
SS18-218ENST00000581021 TLR7Q9NYK1 1049 aaKnown RBP24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms