RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 CIAO1O76071 339 aa21.66■■□□□ 1.06
EIF4A1-216ENST00000580888 IFIT2P09913 472 aaKnown RBP21.66■■□□□ 1.06
EIF4A1-216ENST00000580888 RPS12P25398 132 aaKnown RBP21.66■■□□□ 1.06
EIF4A1-216ENST00000580888 HIRAP54198 1017 aaPredicted RBP21.66■■□□□ 1.06
EIF4A1-216ENST00000580888 DEFB115Q30KQ5 88 aa21.66■■□□□ 1.06
EIF4A1-216ENST00000580888 ATG9AQ7Z3C6 839 aa21.66■■□□□ 1.06
EIF4A1-216ENST00000580888 ANKRD18AQ8IVF6 992 aa21.66■■□□□ 1.06
EIF4A1-216ENST00000580888 TTLL11Q8NHH1 800 aa21.66■■□□□ 1.06
EIF4A1-216ENST00000580888 GGA1Q9UJY5 639 aa21.66■■□□□ 1.06
EIF4A1-216ENST00000580888 XDHP47989 1333 aa21.65■■□□□ 1.06
EIF4A1-216ENST00000580888 H7C1D1 291 aa21.65■■□□□ 1.06
EIF4A1-216ENST00000580888 AACSQ86V21 672 aa21.65■■□□□ 1.06
EIF4A1-216ENST00000580888 TRPM4Q8TD43 1214 aa21.65■■□□□ 1.06
EIF4A1-216ENST00000580888 CDC5LQ99459 802 aaKnown RBP21.65■■□□□ 1.06
EIF4A1-216ENST00000580888 ZC3H12CQ9C0D7 883 aaKnown RBP21.65■■□□□ 1.06
EIF4A1-216ENST00000580888 BCL11AQ9H165 835 aa21.65■■□□□ 1.06
EIF4A1-216ENST00000580888 ZNF646O15015 1829 aaPredicted RBP21.64■■□□□ 1.06
EIF4A1-216ENST00000580888 TRAF5O00463 557 aa21.64■■□□□ 1.05
EIF4A1-216ENST00000580888 UFL1O94874 794 aa21.64■■□□□ 1.05
EIF4A1-216ENST00000580888 FMR1Q06787 632 aaKnown RBP eCLIP21.64■■□□□ 1.055e-7■■□□□ 11.4
EIF4A1-216ENST00000580888 CST9Q5W186 159 aa21.64■■□□□ 1.05
EIF4A1-216ENST00000580888 MICALL2Q8IY33 904 aa21.64■■□□□ 1.05
EIF4A1-216ENST00000580888 GPATCH3Q96I76 525 aa21.64■■□□□ 1.05
EIF4A1-216ENST00000580888 GPR101Q96P66 508 aaPredicted RBP21.64■■□□□ 1.05
EIF4A1-216ENST00000580888 CCDC85AQ96PX6 553 aaPredicted RBP21.64■■□□□ 1.05
EIF4A1-216ENST00000580888 ESYT1Q9BSJ8 1104 aa21.64■■□□□ 1.05
EIF4A1-216ENST00000580888 SIL1Q9H173 461 aa21.64■■□□□ 1.05
EIF4A1-216ENST00000580888 ANKIB1Q9P2G1 1089 aa21.64■■□□□ 1.05
EIF4A1-216ENST00000580888 SHTN1A0MZ66 631 aa21.63■■□□□ 1.05
EIF4A1-216ENST00000580888 IL15P40933 162 aaPredicted RBP21.63■■□□□ 1.05
EIF4A1-216ENST00000580888 BECN1Q14457 450 aa21.63■■□□□ 1.05
EIF4A1-216ENST00000580888 DOK7Q18PE1 504 aa21.63■■□□□ 1.05
EIF4A1-216ENST00000580888 BSDC1Q9NW68 430 aaPredicted RBP21.63■■□□□ 1.05
EIF4A1-216ENST00000580888 ZBTB12Q9Y330 459 aaPredicted RBP21.63■■□□□ 1.05
EIF4A1-216ENST00000580888 EYA2O00167 538 aa21.62■■□□□ 1.05
EIF4A1-216ENST00000580888 REC8O95072 547 aa21.62■■□□□ 1.05
EIF4A1-216ENST00000580888 VIL1P09327 827 aaKnown RBP21.62■■□□□ 1.05
EIF4A1-216ENST00000580888 ATP2B4P23634 1241 aa21.62■■□□□ 1.05
EIF4A1-216ENST00000580888 TNNI3KQ59H18 835 aa21.62■■□□□ 1.05
EIF4A1-216ENST00000580888 SNX21Q969T3 373 aa21.62■■□□□ 1.05
EIF4A1-216ENST00000580888 GREM2Q9H772 168 aa21.62■■□□□ 1.05
EIF4A1-216ENST00000580888 KCNQ5Q9NR82 932 aa21.62■■□□□ 1.05
EIF4A1-216ENST00000580888 ABT1Q9ULW3 272 aaKnown RBP21.62■■□□□ 1.05
EIF4A1-216ENST00000580888 FPGT-TNNI3KV9GXZ4 949 aa21.62■■□□□ 1.05
EIF4A1-216ENST00000580888 WDR33Q9C0J8 1336 aaKnown RBP21.61■■□□□ 1.05
EIF4A1-216ENST00000580888 TRIM6-TRIM34B2RNG4 842 aa21.61■■□□□ 1.05
EIF4A1-216ENST00000580888 TFCP2Q12800 502 aa21.61■■□□□ 1.05
EIF4A1-216ENST00000580888 IL17RAQ96F46 866 aa21.61■■□□□ 1.05
EIF4A1-216ENST00000580888 TLL2Q9Y6L7 1015 aa21.61■■□□□ 1.05
EIF4A1-216ENST00000580888 A0A1B0GUL6 1792 aa21.61■■□□□ 1.05
EIF4A1-216ENST00000580888 CDC37L1Q7L3B6 337 aa21.6■■□□□ 1.05
EIF4A1-216ENST00000580888 RILPL2Q969X0 211 aa21.6■■□□□ 1.05
EIF4A1-216ENST00000580888 TBC1D2Q9BYX2 928 aa21.6■■□□□ 1.05
EIF4A1-216ENST00000580888 GLIS2Q9BZE0 524 aaPredicted RBP21.6■■□□□ 1.05
EIF4A1-216ENST00000580888 CCDC8Q9H0W5 538 aaPredicted RBP21.6■■□□□ 1.05
EIF4A1-216ENST00000580888 WBP1LQ9NX94 342 aa21.6■■□□□ 1.05
EIF4A1-216ENST00000580888 MINPP1Q9UNW1 487 aa21.6■■□□□ 1.05
EIF4A1-216ENST00000580888 MED23Q9ULK4 1368 aa21.6■■□□□ 1.05
EIF4A1-216ENST00000580888 AK9Q5TCS8 1911 aa21.59■■□□□ 1.05
EIF4A1-216ENST00000580888 ATP5JP18859 108 aa21.59■■□□□ 1.05
EIF4A1-216ENST00000580888 TLR7Q9NYK1 1049 aaKnown RBP21.59■■□□□ 1.05
EIF4A1-216ENST00000580888 FOXN1O15353 648 aa21.58■■□□□ 1.05
EIF4A1-216ENST00000580888 SAMD7Q7Z3H4 446 aa21.58■■□□□ 1.05
EIF4A1-216ENST00000580888 EVI5LQ96CN4 794 aa21.58■■□□□ 1.05
EIF4A1-216ENST00000580888 HHIPL1Q96JK4 782 aa21.58■■□□□ 1.05
EIF4A1-216ENST00000580888 DBNLQ9UJU6 430 aaKnown RBP21.58■■□□□ 1.05
EIF4A1-216ENST00000580888 ECE1P42892 770 aa21.57■■□□□ 1.04
EIF4A1-216ENST00000580888 CCDC57Q2TAC2 916 aa21.57■■□□□ 1.04
EIF4A1-216ENST00000580888 ERICH6Q7L0X2 663 aa21.57■■□□□ 1.04
EIF4A1-216ENST00000580888 PODNQ7Z5L7 613 aa21.57■■□□□ 1.04
EIF4A1-216ENST00000580888 SAPCD2Q86UD0 394 aa21.57■■□□□ 1.04
EIF4A1-216ENST00000580888 AGBL3Q8NEM8 1001 aa21.57■■□□□ 1.04
EIF4A1-216ENST00000580888 G3V3G9 751 aa21.56■■□□□ 1.04
EIF4A1-216ENST00000580888 CELF2O95319 508 aaKnown RBP21.56■■□□□ 1.04
EIF4A1-216ENST00000580888 EGFRP00533 1210 aa21.56■■□□□ 1.04
EIF4A1-216ENST00000580888 SLC4A3P48751 1232 aa21.56■■□□□ 1.04
EIF4A1-216ENST00000580888 ZNF280AP59817 542 aaPredicted RBP21.56■■□□□ 1.04
EIF4A1-216ENST00000580888 MAP2K1Q02750 393 aaPredicted RBP21.56■■□□□ 1.04
EIF4A1-216ENST00000580888 TBC1D10BQ4KMP7 808 aaPredicted RBP21.56■■□□□ 1.04
EIF4A1-216ENST00000580888 LRRC24Q50LG9 513 aa21.56■■□□□ 1.04
EIF4A1-216ENST00000580888 DCAF8Q5TAQ9 597 aa21.56■■□□□ 1.04
EIF4A1-216ENST00000580888 RSBN1LQ6PCB5 846 aaPredicted RBP21.56■■□□□ 1.04
EIF4A1-216ENST00000580888 TNS4Q8IZW8 715 aa21.56■■□□□ 1.04
EIF4A1-216ENST00000580888 AIDAQ96BJ3 306 aa21.56■■□□□ 1.04
EIF4A1-216ENST00000580888 CAPNS2Q96L46 248 aa21.56■■□□□ 1.04
EIF4A1-216ENST00000580888 PRDM10Q9NQV6 1147 aa21.56■■□□□ 1.04
EIF4A1-216ENST00000580888 DAXXQ9UER7 740 aaPredicted RBP21.56■■□□□ 1.04
EIF4A1-216ENST00000580888 CHMP3Q9Y3E7 222 aa21.56■■□□□ 1.04
EIF4A1-216ENST00000580888 SGSM2O43147 1006 aa21.55■■□□□ 1.04
EIF4A1-216ENST00000580888 IGHMBP2P38935 993 aaKnown RBP21.55■■□□□ 1.04
EIF4A1-216ENST00000580888 CTCFP49711 727 aaPredicted RBP21.55■■□□□ 1.04
EIF4A1-216ENST00000580888 TICAM2Q86XR7 235 aa21.55■■□□□ 1.04
EIF4A1-216ENST00000580888 ZNF594Q96JF6 807 aaPredicted RBP21.55■■□□□ 1.04
EIF4A1-216ENST00000580888 GMLQ99445 158 aa21.55■■□□□ 1.04
EIF4A1-216ENST00000580888 SNRKQ9NRH2 765 aa21.55■■□□□ 1.04
EIF4A1-216ENST00000580888 LEMD3Q9Y2U8 911 aa21.55■■□□□ 1.04
EIF4A1-216ENST00000580888 ITGA6P23229 1130 aa21.54■■□□□ 1.04
EIF4A1-216ENST00000580888 IFIT5Q13325 482 aaKnown RBP21.54■■□□□ 1.04
EIF4A1-216ENST00000580888 PUS3Q9BZE2 481 aaKnown RBP21.54■■□□□ 1.04
EIF4A1-216ENST00000580888 RIPOR2Q9Y4F9 1068 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms