RNA–Protein interactions for RNA: ENST00000579419.5

IFT20-209, Transcript of intraflagellar transport 20, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene IFT20, Length 787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-209ENST00000579419 ELP3Q9H9T3 547 aa20.32■□□□□ 0.84
IFT20-209ENST00000579419 VEZTQ9HBM0 779 aa20.32■□□□□ 0.84
IFT20-209ENST00000579419 PPP2R3BQ9Y5P8 575 aa20.32■□□□□ 0.84
IFT20-209ENST00000579419 SLC4A8Q2Y0W8 1093 aa20.31■□□□□ 0.84
IFT20-209ENST00000579419 CFAP100Q494V2 611 aa20.31■□□□□ 0.84
IFT20-209ENST00000579419 SLC9C1Q4G0N8 1177 aa20.31■□□□□ 0.84
IFT20-209ENST00000579419 CNKSR2Q8WXI2 1034 aa20.31■□□□□ 0.84
IFT20-209ENST00000579419 PRMT6Q96LA8 375 aaPredicted RBP20.31■□□□□ 0.84
IFT20-209ENST00000579419 CD209Q9NNX6 404 aa20.31■□□□□ 0.84
IFT20-209ENST00000579419 IGHMBP2P38935 993 aaKnown RBP20.3■□□□□ 0.84
IFT20-209ENST00000579419 IREB2P48200 963 aaKnown RBP20.3■□□□□ 0.84
IFT20-209ENST00000579419 CWF19L2Q2TBE0 894 aaKnown RBP20.3■□□□□ 0.84
IFT20-209ENST00000579419 SUPT20HL1Q3ZLR7 823 aa20.3■□□□□ 0.84
IFT20-209ENST00000579419 CHRDL2Q6WN34 429 aa20.3■□□□□ 0.84
IFT20-209ENST00000579419 C8orf58Q8NAV2 365 aa20.3■□□□□ 0.84
IFT20-209ENST00000579419 MS4A4AQ96JQ5 239 aa20.3■□□□□ 0.84
IFT20-209ENST00000579419 JAG2Q9Y219 1238 aa20.3■□□□□ 0.84
IFT20-209ENST00000579419 IRS2Q9Y4H2 1338 aa20.29■□□□□ 0.84
IFT20-209ENST00000579419 LAMB1P07942 1786 aa20.29■□□□□ 0.84
IFT20-209ENST00000579419 SPDYE2BA6NHP3 402 aa20.29■□□□□ 0.84
IFT20-209ENST00000579419 UNCXA6NJT0 531 aa20.29■□□□□ 0.84
IFT20-209ENST00000579419 SPDYE6P0CI01 402 aa20.29■□□□□ 0.84
IFT20-209ENST00000579419 CDAN1Q8IWY9 1227 aa20.29■□□□□ 0.84
IFT20-209ENST00000579419 ANKRD13AQ8IZ07 590 aa20.29■□□□□ 0.84
IFT20-209ENST00000579419 SH3TC2Q8TF17 1288 aa20.29■□□□□ 0.84
IFT20-209ENST00000579419 BRI3BPQ8WY22 251 aa20.29■□□□□ 0.84
IFT20-209ENST00000579419 OPTNQ96CV9 577 aa20.29■□□□□ 0.84
IFT20-209ENST00000579419 PI4KAP2A4QPH2 592 aa20.28■□□□□ 0.84
IFT20-209ENST00000579419 DDX58O95786 925 aaKnown RBP20.28■□□□□ 0.84
IFT20-209ENST00000579419 ITGA6P23229 1130 aa20.28■□□□□ 0.84
IFT20-209ENST00000579419 RASA3Q14644 834 aa20.28■□□□□ 0.84
IFT20-209ENST00000579419 PI4KAP1Q8N8J0 262 aa20.28■□□□□ 0.84
IFT20-209ENST00000579419 ANKRD2Q9GZV1 360 aa20.28■□□□□ 0.84
IFT20-209ENST00000579419 KCNJ4P48050 445 aa20.27■□□□□ 0.84
IFT20-209ENST00000579419 CHRNDQ07001 517 aa20.27■□□□□ 0.84
IFT20-209ENST00000579419 FAM43AQ8N2R8 423 aa20.27■□□□□ 0.84
IFT20-209ENST00000579419 ARHGAP39Q9C0H5 1083 aa20.27■□□□□ 0.84
IFT20-209ENST00000579419 RANBP2P49792 3224 aaKnown RBP20.27■□□□□ 0.84
IFT20-209ENST00000579419 RALBP1Q15311 655 aa20.26■□□□□ 0.83
IFT20-209ENST00000579419 TAF1CQ15572 869 aaPredicted RBP20.26■□□□□ 0.83
IFT20-209ENST00000579419 KSR2Q6VAB6 950 aa20.26■□□□□ 0.83
IFT20-209ENST00000579419 UBE3BQ7Z3V4 1068 aa20.26■□□□□ 0.83
IFT20-209ENST00000579419 NBPF11Q86T75 865 aa20.26■□□□□ 0.83
IFT20-209ENST00000579419 RBM27Q9P2N5 1060 aaKnown RBP20.26■□□□□ 0.83
IFT20-209ENST00000579419 ADAMTS8Q9UP79 889 aa20.26■□□□□ 0.83
IFT20-209ENST00000579419 NEURL1BA8MQ27 555 aa20.25■□□□□ 0.83
IFT20-209ENST00000579419 H7C1W4 665 aa20.25■□□□□ 0.83
IFT20-209ENST00000579419 MYO1BO43795 1136 aa20.25■□□□□ 0.83
IFT20-209ENST00000579419 TAF5LO75529 589 aa20.25■□□□□ 0.83
IFT20-209ENST00000579419 HELBQ8NG08 1087 aaPredicted RBP20.25■□□□□ 0.83
IFT20-209ENST00000579419 MPHOSPH8Q99549 860 aa20.25■□□□□ 0.83
IFT20-209ENST00000579419 CCL15-CCL14A0A0B4J2E2 113 aa20.24■□□□□ 0.83
IFT20-209ENST00000579419 CCL15Q16663 113 aa20.24■□□□□ 0.83
IFT20-209ENST00000579419 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.24■□□□□ 0.83
IFT20-209ENST00000579419 TSPYL6Q8N831 410 aa20.24■□□□□ 0.83
IFT20-209ENST00000579419 SHISA4Q96DD7 197 aa20.24■□□□□ 0.83
IFT20-209ENST00000579419 ZFYVE28Q9HCC9 887 aa20.24■□□□□ 0.83
IFT20-209ENST00000579419 IFT57Q9NWB7 429 aa20.24■□□□□ 0.83
IFT20-209ENST00000579419 ECM2O94769 699 aaPredicted RBP20.23■□□□□ 0.83
IFT20-209ENST00000579419 RBM5P52756 815 aaKnown RBP eCLIP20.23■□□□□ 0.83
IFT20-209ENST00000579419 WDR43Q15061 677 aaKnown RBP eCLIP20.23■□□□□ 0.83
IFT20-209ENST00000579419 OTOFQ9HC10 1997 aa20.23■□□□□ 0.83
IFT20-209ENST00000579419 DLL1O00548 723 aa20.22■□□□□ 0.83
IFT20-209ENST00000579419 VGLL4Q14135 290 aa20.22■□□□□ 0.83
IFT20-209ENST00000579419 CCDC30Q5VVM6 783 aa20.22■□□□□ 0.83
IFT20-209ENST00000579419 TEPSINQ96N21 525 aa20.22■□□□□ 0.83
IFT20-209ENST00000579419 ZSWIM8A7E2V4 1837 aa20.22■□□□□ 0.83
IFT20-209ENST00000579419 CSF1RP07333 972 aa20.21■□□□□ 0.83
IFT20-209ENST00000579419 IL1R1P14778 569 aa20.21■□□□□ 0.83
IFT20-209ENST00000579419 CASP7P55210 303 aa20.21■□□□□ 0.83
IFT20-209ENST00000579419 GNAI1P63096 354 aa20.21■□□□□ 0.83
IFT20-209ENST00000579419 NEXNQ0ZGT2 675 aa20.21■□□□□ 0.83
IFT20-209ENST00000579419 MTFR1Q15390 333 aa20.21■□□□□ 0.83
IFT20-209ENST00000579419 G2E3Q7L622 706 aa20.21■□□□□ 0.83
IFT20-209ENST00000579419 PLA2G12BQ9BX93 195 aa20.21■□□□□ 0.83
IFT20-209ENST00000579419 ZNF70Q9UC06 446 aaPredicted RBP20.21■□□□□ 0.83
IFT20-209ENST00000579419 ARHGEF6Q15052 776 aa20.2■□□□□ 0.82
IFT20-209ENST00000579419 SPDYE2Q495Y8 402 aa20.2■□□□□ 0.82
IFT20-209ENST00000579419 C15orf52Q6ZUT6 534 aaKnown RBP20.2■□□□□ 0.82
IFT20-209ENST00000579419 DPF3Q92784 378 aa20.2■□□□□ 0.82
IFT20-209ENST00000579419 TDRD3Q9H7E2 651 aaKnown RBP20.2■□□□□ 0.82
IFT20-209ENST00000579419 MYBBP1AQ9BQG0 1328 aaKnown RBP20.2■□□□□ 0.82
IFT20-209ENST00000579419 MYH3P11055 1940 aa20.19■□□□□ 0.82
IFT20-209ENST00000579419 ECM29Q5VYK3 1845 aa20.19■□□□□ 0.82
IFT20-209ENST00000579419 GTF2A2P52657 109 aa20.19■□□□□ 0.82
IFT20-209ENST00000579419 FKBP1AP62942 108 aaKnown RBP20.19■□□□□ 0.82
IFT20-209ENST00000579419 TMEM39BQ9GZU3 492 aa20.19■□□□□ 0.82
IFT20-209ENST00000579419 CTGFP29279 349 aa20.18■□□□□ 0.82
IFT20-209ENST00000579419 MAP3K9P80192 1104 aa20.18■□□□□ 0.82
IFT20-209ENST00000579419 LACTBP83111 547 aaPredicted RBP20.18■□□□□ 0.82
IFT20-209ENST00000579419 GCKRQ14397 625 aa20.18■□□□□ 0.82
IFT20-209ENST00000579419 ZNF804AQ7Z570 1209 aa20.18■□□□□ 0.82
IFT20-209ENST00000579419 SLC17A8Q8NDX2 589 aa20.18■□□□□ 0.82
IFT20-209ENST00000579419 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.18■□□□□ 0.823e-8■■■□□ 15.3
IFT20-209ENST00000579419 TCP10L2B9ZVM9 353 aa20.17■□□□□ 0.82
IFT20-209ENST00000579419 APAF1O14727 1248 aa20.17■□□□□ 0.82
IFT20-209ENST00000579419 TLR2O60603 784 aa20.17■□□□□ 0.82
IFT20-209ENST00000579419 PRO3102Q9H379 93 aa20.17■□□□□ 0.82
IFT20-209ENST00000579419 ANKRD18BA2A2Z9 1011 aa20.16■□□□□ 0.82
IFT20-209ENST00000579419 BTBD19C9JJ37 291 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms