RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 PTPRCP08575 1304 aa12.03□□□□□ -0.48
NPLOC4-219ENST00000576713 NFKBIEO00221 500 aa12.02□□□□□ -0.49
NPLOC4-219ENST00000576713 C21orf2O43822 256 aa12.02□□□□□ -0.49
NPLOC4-219ENST00000576713 HOXA10P31260 410 aaPredicted RBP12.02□□□□□ -0.49
NPLOC4-219ENST00000576713 RASSF7Q02833 373 aa12.02□□□□□ -0.49
NPLOC4-219ENST00000576713 MYSM1Q5VVJ2 828 aa12.02□□□□□ -0.49
NPLOC4-219ENST00000576713 UBE3BQ7Z3V4 1068 aa12.02□□□□□ -0.49
NPLOC4-219ENST00000576713 CCDC85AQ96PX6 553 aaPredicted RBP12.02□□□□□ -0.49
NPLOC4-219ENST00000576713 ABCC4O15439 1325 aa12.02□□□□□ -0.49
NPLOC4-219ENST00000576713 KDM4AO75164 1064 aa12.01□□□□□ -0.49
NPLOC4-219ENST00000576713 BCAMP50895 628 aa12.01□□□□□ -0.49
NPLOC4-219ENST00000576713 NEXNQ0ZGT2 675 aa12.01□□□□□ -0.49
NPLOC4-219ENST00000576713 SKIV2LQ15477 1246 aaKnown RBP12.01□□□□□ -0.49
NPLOC4-219ENST00000576713 EPHA10Q5JZY3 1008 aa12.01□□□□□ -0.49
NPLOC4-219ENST00000576713 KAZALD1Q96I82 304 aa12.01□□□□□ -0.49
NPLOC4-219ENST00000576713 NLRP3Q96P20 1036 aa12.01□□□□□ -0.49
NPLOC4-219ENST00000576713 SEC31BQ9NQW1 1179 aa12.01□□□□□ -0.49
NPLOC4-219ENST00000576713 CDHR2Q9BYE9 1310 aa12.01□□□□□ -0.49
NPLOC4-219ENST00000576713 NBPF7P0C2Y1 421 aaPredicted RBP12□□□□□ -0.49
NPLOC4-219ENST00000576713 SF3B3Q15393 1217 aaKnown RBP12□□□□□ -0.49
NPLOC4-219ENST00000576713 CELF1Q92879 486 aaKnown RBP12□□□□□ -0.49
NPLOC4-219ENST00000576713 PDZRN3Q9UPQ7 1066 aa12□□□□□ -0.49
NPLOC4-219ENST00000576713 GTF3C3Q9Y5Q9 886 aa12□□□□□ -0.49
NPLOC4-219ENST00000576713 CFHP08603 1231 aa11.99□□□□□ -0.49
NPLOC4-219ENST00000576713 TRIM27P14373 513 aa11.99□□□□□ -0.49
NPLOC4-219ENST00000576713 FOXO4P98177 505 aa11.99□□□□□ -0.49
NPLOC4-219ENST00000576713 ARHGAP27Q6ZUM4 889 aa11.99□□□□□ -0.49
NPLOC4-219ENST00000576713 RPGRQ92834 1020 aaKnown RBP11.99□□□□□ -0.49
NPLOC4-219ENST00000576713 FRAT1Q92837 279 aaPredicted RBP11.99□□□□□ -0.49
NPLOC4-219ENST00000576713 CNKSR1Q969H4 720 aa11.99□□□□□ -0.49
NPLOC4-219ENST00000576713 CRAMP1Q96RY5 1269 aa11.99□□□□□ -0.49
NPLOC4-219ENST00000576713 SRCIN1Q9C0H9 1055 aa11.99□□□□□ -0.49
NPLOC4-219ENST00000576713 POLR3EQ9NVU0 708 aa11.99□□□□□ -0.49
NPLOC4-219ENST00000576713 COL4A5P29400 1685 aa11.99□□□□□ -0.49
NPLOC4-219ENST00000576713 FER1L6Q2WGJ9 1857 aa11.98□□□□□ -0.49
NPLOC4-219ENST00000576713 LRRC37AA6NMS7 1700 aa11.98□□□□□ -0.49
NPLOC4-219ENST00000576713 DUOX1Q9NRD9 1551 aa11.98□□□□□ -0.49
NPLOC4-219ENST00000576713 GRM8O00222 908 aa11.98□□□□□ -0.49
NPLOC4-219ENST00000576713 PDE8AO60658 829 aa11.98□□□□□ -0.49
NPLOC4-219ENST00000576713 RLBP1P12271 317 aa11.98□□□□□ -0.49
NPLOC4-219ENST00000576713 CTSWP56202 376 aa11.98□□□□□ -0.49
NPLOC4-219ENST00000576713 TTLL11Q8NHH1 800 aa11.98□□□□□ -0.49
NPLOC4-219ENST00000576713 SUCLG2Q96I99 432 aa11.98□□□□□ -0.49
NPLOC4-219ENST00000576713 PCMTD1Q96MG8 357 aaPredicted RBP11.98□□□□□ -0.49
NPLOC4-219ENST00000576713 USP44Q9H0E7 712 aa11.98□□□□□ -0.49
NPLOC4-219ENST00000576713 GREM2Q9H772 168 aa11.98□□□□□ -0.49
NPLOC4-219ENST00000576713 PCDH10Q9P2E7 1040 aa11.98□□□□□ -0.49
NPLOC4-219ENST00000576713 HPS5Q9UPZ3 1129 aa11.98□□□□□ -0.49
NPLOC4-219ENST00000576713 UTYO14607 1347 aa11.97□□□□□ -0.49
NPLOC4-219ENST00000576713 KIF16BQ96L93 1317 aa11.97□□□□□ -0.49
NPLOC4-219ENST00000576713 PPEF1O14829 653 aaPredicted RBP11.97□□□□□ -0.49
NPLOC4-219ENST00000576713 ALDH1L1O75891 902 aa11.97□□□□□ -0.49
NPLOC4-219ENST00000576713 PPP4CP60510 307 aa11.97□□□□□ -0.49
NPLOC4-219ENST00000576713 USP46P62068 366 aa11.97□□□□□ -0.49
NPLOC4-219ENST00000576713 CLUAP1Q96AJ1 413 aa11.97□□□□□ -0.49
NPLOC4-219ENST00000576713 RBM17Q96I25 401 aaKnown RBP11.97□□□□□ -0.49
NPLOC4-219ENST00000576713 TSR3Q9UJK0 312 aaKnown RBP11.97□□□□□ -0.49
NPLOC4-219ENST00000576713 MOXD2PA6NHM9 499 aa11.96□□□□□ -0.49
NPLOC4-219ENST00000576713 WTIPA6NIX2 430 aaPredicted RBP11.96□□□□□ -0.49
NPLOC4-219ENST00000576713 CSF1RP07333 972 aa11.96□□□□□ -0.49
NPLOC4-219ENST00000576713 ALDH1B1P30837 517 aa11.96□□□□□ -0.49
NPLOC4-219ENST00000576713 CLK2P49760 499 aaKnown RBP11.96□□□□□ -0.49
NPLOC4-219ENST00000576713 GRAPQ13588 217 aa11.96□□□□□ -0.49
NPLOC4-219ENST00000576713 ATF7IPQ6VMQ6 1270 aa11.96□□□□□ -0.49
NPLOC4-219ENST00000576713 THSD4Q6ZMP0 1018 aa11.96□□□□□ -0.49
NPLOC4-219ENST00000576713 DDX46Q7L014 1031 aaKnown RBP11.96□□□□□ -0.49
NPLOC4-219ENST00000576713 GRAPLQ8TC17 118 aaPredicted RBP11.96□□□□□ -0.49
NPLOC4-219ENST00000576713 ARHGAP45Q92619 1136 aa11.96□□□□□ -0.49
NPLOC4-219ENST00000576713 KCTD12Q96CX2 325 aaKnown RBP11.96□□□□□ -0.49
NPLOC4-219ENST00000576713 PLA2G12BQ9BX93 195 aa11.96□□□□□ -0.49
NPLOC4-219ENST00000576713 LTBP1Q14766 1721 aa11.96□□□□□ -0.49
NPLOC4-219ENST00000576713 PLIN1O60240 522 aa11.95□□□□□ -0.5
NPLOC4-219ENST00000576713 KMT5BQ4FZB7 885 aa11.95□□□□□ -0.5
NPLOC4-219ENST00000576713 INTS3Q68E01 1043 aaKnown RBP11.95□□□□□ -0.5
NPLOC4-219ENST00000576713 ANKRD44Q8N8A2 993 aa11.95□□□□□ -0.5
NPLOC4-219ENST00000576713 PROCA1Q8NCQ7 364 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-219ENST00000576713 MEIS3Q99687 375 aa11.95□□□□□ -0.5
NPLOC4-219ENST00000576713 API5Q9BZZ5 524 aaKnown RBP11.95□□□□□ -0.5
NPLOC4-219ENST00000576713 ATP6V0A2Q9Y487 856 aa11.95□□□□□ -0.5
NPLOC4-219ENST00000576713 SPEF2Q9C093 1822 aa11.95□□□□□ -0.5
NPLOC4-219ENST00000576713 RTL9Q8NET4 1388 aa11.94□□□□□ -0.5
NPLOC4-219ENST00000576713 MYH3P11055 1940 aa11.94□□□□□ -0.5
NPLOC4-219ENST00000576713 SBF1O95248 1867 aa11.94□□□□□ -0.5
NPLOC4-219ENST00000576713 SPTLC1O15269 473 aa11.94□□□□□ -0.5
NPLOC4-219ENST00000576713 HOXA2O43364 376 aa11.94□□□□□ -0.5
NPLOC4-219ENST00000576713 NDUFV2P19404 249 aa11.94□□□□□ -0.5
NPLOC4-219ENST00000576713 FUT2Q10981 343 aa11.94□□□□□ -0.5
NPLOC4-219ENST00000576713 CCDC152Q4G0S7 254 aa11.94□□□□□ -0.5
NPLOC4-219ENST00000576713 CCDC93Q567U6 631 aa11.94□□□□□ -0.5
NPLOC4-219ENST00000576713 C9orf131Q5VYM1 1079 aa11.94□□□□□ -0.5
NPLOC4-219ENST00000576713 RSBN1LQ6PCB5 846 aaPredicted RBP11.94□□□□□ -0.5
NPLOC4-219ENST00000576713 LMBR1LQ6UX01 489 aa11.94□□□□□ -0.5
NPLOC4-219ENST00000576713 TMEM57Q8N5G2 664 aa11.94□□□□□ -0.5
NPLOC4-219ENST00000576713 BICC1Q9H694 974 aaKnown RBP11.94□□□□□ -0.5
NPLOC4-219ENST00000576713 C9orf78Q9NZ63 289 aaPredicted RBP11.94□□□□□ -0.5
NPLOC4-219ENST00000576713 LIMD1Q9UGP4 676 aa11.94□□□□□ -0.5
NPLOC4-219ENST00000576713 RCAN3Q9UKA8 241 aa11.94□□□□□ -0.5
NPLOC4-219ENST00000576713 TIAM2Q8IVF5 1701 aa11.94□□□□□ -0.5
NPLOC4-219ENST00000576713 CCT4P50991 539 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-219ENST00000576713 C20orf194Q5TEA3 1177 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms