RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 JAG2Q9Y219 1238 aa11.21□□□□□ -0.61
NPLOC4-204ENST00000570324 FAM155AB1AL88 458 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-204ENST00000570324 UBE2Q2LH0YL09 131 aa11.2□□□□□ -0.62
NPLOC4-204ENST00000570324 SLC10A3P09131 477 aa11.2□□□□□ -0.62
NPLOC4-204ENST00000570324 CT47B1P0C2W7 299 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-204ENST00000570324 FKBP1AP62942 108 aaKnown RBP11.2□□□□□ -0.62
NPLOC4-204ENST00000570324 PRKG1Q13976 671 aa11.2□□□□□ -0.62
NPLOC4-204ENST00000570324 CAVIN4Q5BKX8 364 aa11.2□□□□□ -0.62
NPLOC4-204ENST00000570324 ARMC9Q7Z3E5 817 aa11.2□□□□□ -0.62
NPLOC4-204ENST00000570324 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-204ENST00000570324 ZIC5Q96T25 663 aa11.2□□□□□ -0.62
NPLOC4-204ENST00000570324 A0A1B0GUL6 1792 aa11.19□□□□□ -0.62
NPLOC4-204ENST00000570324 PAPPA2Q9BXP8 1791 aa11.19□□□□□ -0.62
NPLOC4-204ENST00000570324 GYG1P46976 350 aa11.19□□□□□ -0.62
NPLOC4-204ENST00000570324 CFAP100Q494V2 611 aa11.19□□□□□ -0.62
NPLOC4-204ENST00000570324 CERS5Q8N5B7 392 aa11.19□□□□□ -0.62
NPLOC4-204ENST00000570324 KAZALD1Q96I82 304 aa11.19□□□□□ -0.62
NPLOC4-204ENST00000570324 VEZTQ9HBM0 779 aa11.19□□□□□ -0.62
NPLOC4-204ENST00000570324 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-204ENST00000570324 HDAC5Q9UQL6 1122 aa11.19□□□□□ -0.62
NPLOC4-204ENST00000570324 RIPOR2Q9Y4F9 1068 aa11.19□□□□□ -0.62
NPLOC4-204ENST00000570324 IRS2Q9Y4H2 1338 aa11.18□□□□□ -0.62
NPLOC4-204ENST00000570324 TRPA1O75762 1119 aa11.18□□□□□ -0.62
NPLOC4-204ENST00000570324 UBTFL1P0CB47 393 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-204ENST00000570324 RABL6Q3YEC7 729 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-204ENST00000570324 LRRC24Q50LG9 513 aa11.18□□□□□ -0.62
NPLOC4-204ENST00000570324 MFSD14BQ5SR56 506 aa11.18□□□□□ -0.62
NPLOC4-204ENST00000570324 MOB2Q70IA6 237 aa11.18□□□□□ -0.62
NPLOC4-204ENST00000570324 RASAL3Q86YV0 1011 aa11.18□□□□□ -0.62
NPLOC4-204ENST00000570324 MTMR14Q8NCE2 650 aa11.18□□□□□ -0.62
NPLOC4-204ENST00000570324 ABHD8Q96I13 439 aa11.18□□□□□ -0.62
NPLOC4-204ENST00000570324 FAM84BQ96KN1 310 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-204ENST00000570324 API5Q9BZZ5 524 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-204ENST00000570324 USP44Q9H0E7 712 aa11.18□□□□□ -0.62
NPLOC4-204ENST00000570324 SAGE1Q9NXZ1 904 aa11.18□□□□□ -0.62
NPLOC4-204ENST00000570324 NOB1Q9ULX3 412 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-204ENST00000570324 TTF2Q9UNY4 1162 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-204ENST00000570324 FAM205AQ6ZU69 1335 aa11.17□□□□□ -0.62
NPLOC4-204ENST00000570324 ZNF646O15015 1829 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-204ENST00000570324 CLRN2A0PK11 232 aa11.17□□□□□ -0.62
NPLOC4-204ENST00000570324 PPP1R12BO60237 982 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-204ENST00000570324 PDE8BO95263 885 aa11.17□□□□□ -0.62
NPLOC4-204ENST00000570324 CHAF1AQ13111 956 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-204ENST00000570324 SUPT20HL1Q3ZLR7 823 aa11.17□□□□□ -0.62
NPLOC4-204ENST00000570324 ANKRD44Q8N8A2 993 aa11.17□□□□□ -0.62
NPLOC4-204ENST00000570324 TDRD7Q8NHU6 1098 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-204ENST00000570324 KLHDC4Q8TBB5 520 aa11.17□□□□□ -0.62
NPLOC4-204ENST00000570324 CSRNP1Q96S65 589 aa11.17□□□□□ -0.62
NPLOC4-204ENST00000570324 DEFB129Q9H1M3 183 aa11.17□□□□□ -0.62
NPLOC4-204ENST00000570324 ANGEL1Q9UNK9 670 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-204ENST00000570324 IQSEC3Q9UPP2 1182 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-204ENST00000570324 PPP2R3BQ9Y5P8 575 aa11.17□□□□□ -0.62
NPLOC4-204ENST00000570324 AKAP11Q9UKA4 1901 aa11.17□□□□□ -0.62
NPLOC4-204ENST00000570324 SPDYE2BA6NHP3 402 aa11.16□□□□□ -0.62
NPLOC4-204ENST00000570324 CCDC85CA6NKD9 419 aa11.16□□□□□ -0.62
NPLOC4-204ENST00000570324 IFIT1P09914 478 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-204ENST00000570324 SPDYE6P0CI01 402 aa11.16□□□□□ -0.62
NPLOC4-204ENST00000570324 MKRN3Q13064 507 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-204ENST00000570324 DGKZQ13574 1117 aa11.16□□□□□ -0.62
NPLOC4-204ENST00000570324 TNFAIP1Q13829 316 aa11.16□□□□□ -0.62
NPLOC4-204ENST00000570324 TRMT2AQ8IZ69 625 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-204ENST00000570324 TBC1D22AQ8WUA7 517 aa11.16□□□□□ -0.62
NPLOC4-204ENST00000570324 ZBED3Q96IU2 234 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-204ENST00000570324 PRMT6Q96LA8 375 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-204ENST00000570324 RNF186Q9NXI6 227 aa11.16□□□□□ -0.62
NPLOC4-204ENST00000570324 COL1A1P02452 1464 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-204ENST00000570324 EYA2O00167 538 aa11.15□□□□□ -0.62
NPLOC4-204ENST00000570324 SLC5A1P13866 664 aa11.15□□□□□ -0.62
NPLOC4-204ENST00000570324 TNNI2P48788 182 aa11.15□□□□□ -0.62
NPLOC4-204ENST00000570324 PTPN12Q05209 780 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-204ENST00000570324 SREBF2Q12772 1141 aa11.15□□□□□ -0.62
NPLOC4-204ENST00000570324 PUM3Q15397 648 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-204ENST00000570324 SLC10A4Q96EP9 437 aa11.15□□□□□ -0.62
NPLOC4-204ENST00000570324 MCOLN1Q9GZU1 580 aa11.15□□□□□ -0.62
NPLOC4-204ENST00000570324 SERPINA10Q9UK55 444 aa11.15□□□□□ -0.62
NPLOC4-204ENST00000570324 PCDHAC2Q9Y5I4 1007 aa11.15□□□□□ -0.62
NPLOC4-204ENST00000570324 CASP8AP2Q9UKL3 1982 aa11.15□□□□□ -0.62
NPLOC4-204ENST00000570324 KIF16BQ96L93 1317 aa11.14□□□□□ -0.63
NPLOC4-204ENST00000570324 IPO8O15397 1037 aaKnown RBP11.14□□□□□ -0.63
NPLOC4-204ENST00000570324 IREB2P48200 963 aaKnown RBP11.14□□□□□ -0.63
NPLOC4-204ENST00000570324 BCAMP50895 628 aa11.14□□□□□ -0.63
NPLOC4-204ENST00000570324 FBXO33Q7Z6M2 555 aa11.14□□□□□ -0.63
NPLOC4-204ENST00000570324 SIL1Q9H173 461 aa11.14□□□□□ -0.63
NPLOC4-204ENST00000570324 ECM29Q5VYK3 1845 aa11.14□□□□□ -0.63
NPLOC4-204ENST00000570324 CRKP46108 304 aa11.13□□□□□ -0.63
NPLOC4-204ENST00000570324 RARSP54136 660 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-204ENST00000570324 RASA3Q14644 834 aa11.13□□□□□ -0.63
NPLOC4-204ENST00000570324 DZIP1LQ8IYY4 767 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-204ENST00000570324 LPIN2Q92539 896 aa11.13□□□□□ -0.63
NPLOC4-204ENST00000570324 FRAT1Q92837 279 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-204ENST00000570324 TDRD3Q9H7E2 651 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-204ENST00000570324 GNL3LQ9NVN8 582 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-204ENST00000570324 TMOD2Q9NZR1 351 aa11.13□□□□□ -0.63
NPLOC4-204ENST00000570324 CEP126Q9P2H0 1117 aa11.13□□□□□ -0.63
NPLOC4-204ENST00000570324 ZNF70Q9UC06 446 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-204ENST00000570324 FZD1Q9UP38 647 aa11.13□□□□□ -0.63
NPLOC4-204ENST00000570324 MAST3O60307 1309 aa11.12□□□□□ -0.63
NPLOC4-204ENST00000570324 TCP10L2B9ZVM9 353 aa11.12□□□□□ -0.63
NPLOC4-204ENST00000570324 GNAI3P08754 354 aa11.12□□□□□ -0.63
NPLOC4-204ENST00000570324 SPDYE2Q495Y8 402 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms