RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 MRS2Q9HD23 443 aa9.34□□□□□ -0.91
CNOT1-218ENST00000569732 SERPINA10Q9UK55 444 aa9.34□□□□□ -0.91
CNOT1-218ENST00000569732 ADAMTS8Q9UP79 889 aa9.34□□□□□ -0.91
CNOT1-218ENST00000569732 GJA3Q9Y6H8 435 aa9.34□□□□□ -0.91
CNOT1-218ENST00000569732 CST9Q5W186 159 aa9.33□□□□□ -0.92
CNOT1-218ENST00000569732 CCDC97Q96F63 343 aaPredicted RBP9.33□□□□□ -0.92
CNOT1-218ENST00000569732 ADARB2Q9NS39 739 aaKnown RBP9.33□□□□□ -0.92
CNOT1-218ENST00000569732 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.33□□□□□ -0.92
CNOT1-218ENST00000569732 IBTKQ9P2D0 1353 aaPredicted RBP9.33□□□□□ -0.92
CNOT1-218ENST00000569732 COL4A5P29400 1685 aa9.32□□□□□ -0.92
CNOT1-218ENST00000569732 LAMB4A4D0S4 1761 aa9.32□□□□□ -0.92
CNOT1-218ENST00000569732 CFAP99D6REC4 459 aa9.32□□□□□ -0.92
CNOT1-218ENST00000569732 KCNQ3O43525 872 aa9.32□□□□□ -0.92
CNOT1-218ENST00000569732 HOXA10P31260 410 aaPredicted RBP9.32□□□□□ -0.92
CNOT1-218ENST00000569732 EPS15P42566 896 aa9.32□□□□□ -0.92
CNOT1-218ENST00000569732 PIP4K2AP48426 406 aaPredicted RBP9.32□□□□□ -0.92
CNOT1-218ENST00000569732 LSM11P83369 360 aaKnown RBP eCLIP9.32□□□□□ -0.92
CNOT1-218ENST00000569732 GRM1Q13255 1194 aa9.32□□□□□ -0.92
CNOT1-218ENST00000569732 SAPCD2Q86UD0 394 aa9.32□□□□□ -0.92
CNOT1-218ENST00000569732 LARGE2Q8N3Y3 721 aa9.32□□□□□ -0.92
CNOT1-218ENST00000569732 MCOLN1Q9GZU1 580 aa9.32□□□□□ -0.92
CNOT1-218ENST00000569732 VPS33BQ9H267 617 aa9.32□□□□□ -0.92
CNOT1-218ENST00000569732 PLSCR2Q9NRY7 297 aa9.32□□□□□ -0.92
CNOT1-218ENST00000569732 NDUFB9Q9Y6M9 179 aa9.32□□□□□ -0.92
CNOT1-218ENST00000569732 CDHR2Q9BYE9 1310 aa9.31□□□□□ -0.92
CNOT1-218ENST00000569732 PRAMEF22A3QJZ6 481 aa9.31□□□□□ -0.92
CNOT1-218ENST00000569732 FAM177BA6PVY3 158 aa9.31□□□□□ -0.92
CNOT1-218ENST00000569732 ERVV-1B6SEH8 477 aa9.31□□□□□ -0.92
CNOT1-218ENST00000569732 WDR43Q15061 677 aaKnown RBP eCLIP9.31□□□□□ -0.92
CNOT1-218ENST00000569732 NBPF10Q6P3W6 841 aaKnown RBP9.31□□□□□ -0.92
CNOT1-218ENST00000569732 NBPF15Q8N660 670 aa9.31□□□□□ -0.92
CNOT1-218ENST00000569732 RTF1Q92541 710 aaKnown RBP9.31□□□□□ -0.92
CNOT1-218ENST00000569732 SYMPKQ92797 1274 aaKnown RBP9.31□□□□□ -0.92
CNOT1-218ENST00000569732 RPGRQ92834 1020 aaKnown RBP9.31□□□□□ -0.92
CNOT1-218ENST00000569732 ABCC12Q96J65 1359 aa9.3□□□□□ -0.92
CNOT1-218ENST00000569732 GOLGA8CPA6NN73 597 aa9.3□□□□□ -0.92
CNOT1-218ENST00000569732 TRAF5O00463 557 aa9.3□□□□□ -0.92
CNOT1-218ENST00000569732 HRO43593 1189 aa9.3□□□□□ -0.92
CNOT1-218ENST00000569732 ACTN4O43707 911 aaKnown RBP9.3□□□□□ -0.92
CNOT1-218ENST00000569732 AOC2O75106 756 aa9.3□□□□□ -0.92
CNOT1-218ENST00000569732 FMR1Q06787 632 aaKnown RBP eCLIP9.3□□□□□ -0.923e-8■■□□□ 11.4
CNOT1-218ENST00000569732 HLFQ16534 295 aa9.3□□□□□ -0.92
CNOT1-218ENST00000569732 MORN1Q5T089 497 aa9.3□□□□□ -0.92
CNOT1-218ENST00000569732 NIM1KQ8IY84 436 aa9.3□□□□□ -0.92
CNOT1-218ENST00000569732 CRAMP1Q96RY5 1269 aa9.3□□□□□ -0.92
CNOT1-218ENST00000569732 TMX4Q9H1E5 349 aaPredicted RBP9.3□□□□□ -0.92
CNOT1-218ENST00000569732 HMX1Q9NP08 348 aaPredicted RBP9.3□□□□□ -0.92
CNOT1-218ENST00000569732 GPRC5DQ9NZD1 345 aa9.3□□□□□ -0.92
CNOT1-218ENST00000569732 TNRC18O15417 2968 aaPredicted RBP9.3□□□□□ -0.92
CNOT1-218ENST00000569732 PPEF1O14829 653 aaPredicted RBP9.29□□□□□ -0.92
CNOT1-218ENST00000569732 HTATSF1O43719 755 aaKnown RBP9.29□□□□□ -0.92
CNOT1-218ENST00000569732 CELF2O95319 508 aaKnown RBP9.29□□□□□ -0.92
CNOT1-218ENST00000569732 PUS10Q3MIT2 529 aaKnown RBP9.29□□□□□ -0.92
CNOT1-218ENST00000569732 CCDC146Q8IYE0 955 aa9.29□□□□□ -0.92
CNOT1-218ENST00000569732 PRR7Q8TB68 274 aa9.29□□□□□ -0.92
CNOT1-218ENST00000569732 LRRN4Q8WUT4 740 aa9.29□□□□□ -0.92
CNOT1-218ENST00000569732 RUNDC1Q96C34 613 aa9.29□□□□□ -0.92
CNOT1-218ENST00000569732 RBM17Q96I25 401 aaKnown RBP9.29□□□□□ -0.92
CNOT1-218ENST00000569732 PRR14Q9BWN1 585 aa9.29□□□□□ -0.92
CNOT1-218ENST00000569732 PGAP2Q9UHJ9 254 aa9.29□□□□□ -0.92
CNOT1-218ENST00000569732 PPIP5K2O43314 1243 aa9.28□□□□□ -0.92
CNOT1-218ENST00000569732 NOGQ13253 232 aa9.28□□□□□ -0.92
CNOT1-218ENST00000569732 DGKZQ13574 1117 aa9.28□□□□□ -0.92
CNOT1-218ENST00000569732 NFE2L2Q16236 605 aa9.28□□□□□ -0.92
CNOT1-218ENST00000569732 Q3C1V9 767 aa9.28□□□□□ -0.92
CNOT1-218ENST00000569732 KIF6Q6ZMV9 814 aa9.28□□□□□ -0.92
CNOT1-218ENST00000569732 SUPT20HQ8NEM7 779 aa9.28□□□□□ -0.92
CNOT1-218ENST00000569732 ANKK1Q8NFD2 765 aa9.28□□□□□ -0.92
CNOT1-218ENST00000569732 ZNRF3Q9ULT6 936 aa9.28□□□□□ -0.92
CNOT1-218ENST00000569732 SLC27A5Q9Y2P5 690 aa9.28□□□□□ -0.92
CNOT1-218ENST00000569732 NUP98P52948 1817 aa9.28□□□□□ -0.92
CNOT1-218ENST00000569732 MAP3K15Q6ZN16 1313 aa9.28□□□□□ -0.92
CNOT1-218ENST00000569732 PPP4CP60510 307 aa9.27□□□□□ -0.93
CNOT1-218ENST00000569732 TAF7Q15545 349 aaPredicted RBP9.27□□□□□ -0.93
CNOT1-218ENST00000569732 ANKRD13DQ6ZTN6 518 aa9.27□□□□□ -0.93
CNOT1-218ENST00000569732 CDC37L1Q7L3B6 337 aa9.27□□□□□ -0.93
CNOT1-218ENST00000569732 MCM10Q7L590 875 aa9.27□□□□□ -0.93
CNOT1-218ENST00000569732 RETREG3Q86VR2 466 aa9.27□□□□□ -0.93
CNOT1-218ENST00000569732 RTFDC1Q9BY42 306 aaPredicted RBP9.27□□□□□ -0.93
CNOT1-218ENST00000569732 TRIM34Q9BYJ4 488 aa9.27□□□□□ -0.93
CNOT1-218ENST00000569732 SAGE1Q9NXZ1 904 aa9.27□□□□□ -0.93
CNOT1-218ENST00000569732 TMPOP42166 694 aaKnown RBP9.26□□□□□ -0.93
CNOT1-218ENST00000569732 CXCL9Q07325 125 aa9.26□□□□□ -0.93
CNOT1-218ENST00000569732 AOC3Q16853 763 aa9.26□□□□□ -0.93
CNOT1-218ENST00000569732 CIAPIN1Q6FI81 312 aa9.26□□□□□ -0.93
CNOT1-218ENST00000569732 PPP1R42Q7Z4L9 355 aa9.26□□□□□ -0.93
CNOT1-218ENST00000569732 FAM9BQ8IZU0 186 aa9.26□□□□□ -0.93
CNOT1-218ENST00000569732 CALR3Q96L12 384 aaKnown RBP9.26□□□□□ -0.93
CNOT1-218ENST00000569732 NLRP3Q96P20 1036 aa9.26□□□□□ -0.93
CNOT1-218ENST00000569732 GLIS2Q9BZE0 524 aaPredicted RBP9.26□□□□□ -0.93
CNOT1-218ENST00000569732 PNNQ9H307 717 aaKnown RBP9.26□□□□□ -0.93
CNOT1-218ENST00000569732 ATP6V0A2Q9Y487 856 aa9.26□□□□□ -0.93
CNOT1-218ENST00000569732 UBN2Q6ZU65 1347 aa9.26□□□□□ -0.93
CNOT1-218ENST00000569732 MAPK8IP3Q9UPT6 1336 aa9.26□□□□□ -0.93
CNOT1-218ENST00000569732 KDM3BQ7LBC6 1761 aa9.25□□□□□ -0.93
CNOT1-218ENST00000569732 SOWAHBA6NEL2 793 aa9.25□□□□□ -0.93
CNOT1-218ENST00000569732 POM121CA8CG34 1229 aa9.25□□□□□ -0.93
CNOT1-218ENST00000569732 APAF1O14727 1248 aa9.25□□□□□ -0.93
CNOT1-218ENST00000569732 NTSR2O95665 410 aa9.25□□□□□ -0.93
CNOT1-218ENST00000569732 GMPSP49915 693 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms