RNA–Protein interactions for RNA: ENST00000568796.1

PKD1-236, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 447 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-236ENST00000568796 PCDHAC2Q9Y5I4 1007 aa19.57■□□□□ 0.72
PKD1-236ENST00000568796 ZNF646O15015 1829 aaPredicted RBP19.57■□□□□ 0.72
PKD1-236ENST00000568796 TNRC18O15417 2968 aaPredicted RBP19.57■□□□□ 0.72
PKD1-236ENST00000568796 CLRN2A0PK11 232 aa19.56■□□□□ 0.72
PKD1-236ENST00000568796 F6X3S4 739 aa19.56■□□□□ 0.72
PKD1-236ENST00000568796 PPP1R12BO60237 982 aaPredicted RBP19.56■□□□□ 0.72
PKD1-236ENST00000568796 RBM5P52756 815 aaKnown RBP eCLIP19.56■□□□□ 0.72
PKD1-236ENST00000568796 CFAP100Q494V2 611 aa19.56■□□□□ 0.72
PKD1-236ENST00000568796 NOM1Q5C9Z4 860 aaKnown RBP19.56■□□□□ 0.72
PKD1-236ENST00000568796 VEZTQ9HBM0 779 aa19.56■□□□□ 0.72
PKD1-236ENST00000568796 ALDH1A1P00352 501 aa19.55■□□□□ 0.72
PKD1-236ENST00000568796 MANSC4A6NHS7 340 aaPredicted RBP19.54■□□□□ 0.72
PKD1-236ENST00000568796 VAMP4O75379 141 aa19.54■□□□□ 0.72
PKD1-236ENST00000568796 FOXO4P98177 505 aa19.54■□□□□ 0.72
PKD1-236ENST00000568796 EXOSC9Q06265 439 aaKnown RBP19.54■□□□□ 0.72
PKD1-236ENST00000568796 LMBR1LQ6UX01 489 aa19.54■□□□□ 0.72
PKD1-236ENST00000568796 MTMR14Q8NCE2 650 aa19.54■□□□□ 0.72
PKD1-236ENST00000568796 CNNM1Q9NRU3 951 aa19.54■□□□□ 0.72
PKD1-236ENST00000568796 COL1A1P02452 1464 aaPredicted RBP19.54■□□□□ 0.72
PKD1-236ENST00000568796 CCDC57Q2TAC2 916 aa19.53■□□□□ 0.72
PKD1-236ENST00000568796 SUPT20HL1Q3ZLR7 823 aa19.53■□□□□ 0.72
PKD1-236ENST00000568796 PRPF38BQ5VTL8 546 aaKnown RBP19.53■□□□□ 0.72
PKD1-236ENST00000568796 C15orf52Q6ZUT6 534 aaKnown RBP19.53■□□□□ 0.72
PKD1-236ENST00000568796 WNK4Q96J92 1243 aa19.53■□□□□ 0.72
PKD1-236ENST00000568796 ZNF594Q96JF6 807 aaPredicted RBP19.53■□□□□ 0.72
PKD1-236ENST00000568796 CLMNQ96JQ2 1002 aa19.53■□□□□ 0.72
PKD1-236ENST00000568796 CFHR5Q9BXR6 569 aa19.53■□□□□ 0.72
PKD1-236ENST00000568796 PPP2R3BQ9Y5P8 575 aa19.53■□□□□ 0.72
PKD1-236ENST00000568796 IRS2Q9Y4H2 1338 aa19.52■□□□□ 0.72
PKD1-236ENST00000568796 SPDYE2BA6NHP3 402 aa19.52■□□□□ 0.72
PKD1-236ENST00000568796 SPDYE6P0CI01 402 aa19.52■□□□□ 0.72
PKD1-236ENST00000568796 IL1R1P14778 569 aa19.52■□□□□ 0.72
PKD1-236ENST00000568796 INHBEP58166 350 aa19.52■□□□□ 0.72
PKD1-236ENST00000568796 LDHAL6AQ6ZMR3 332 aa19.52■□□□□ 0.72
PKD1-236ENST00000568796 IFNL1Q8IU54 200 aa19.52■□□□□ 0.72
PKD1-236ENST00000568796 PRMT6Q96LA8 375 aaPredicted RBP19.52■□□□□ 0.72
PKD1-236ENST00000568796 MRS2Q9HD23 443 aa19.52■□□□□ 0.72
PKD1-236ENST00000568796 ZBTB48P10074 688 aaPredicted RBP19.51■□□□□ 0.71
PKD1-236ENST00000568796 MAP3K11Q16584 847 aa19.51■□□□□ 0.71
PKD1-236ENST00000568796 BEND3Q5T5X7 828 aa19.51■□□□□ 0.71
PKD1-236ENST00000568796 NBPF12Q5TAG4 269 aaPredicted RBP19.51■□□□□ 0.71
PKD1-236ENST00000568796 TRIM17Q9Y577 477 aa19.51■□□□□ 0.71
PKD1-236ENST00000568796 IREB2P48200 963 aaKnown RBP19.5■□□□□ 0.71
PKD1-236ENST00000568796 FKBP1AP62942 108 aaKnown RBP19.5■□□□□ 0.71
PKD1-236ENST00000568796 EPHA10Q5JZY3 1008 aa19.5■□□□□ 0.71
PKD1-236ENST00000568796 WDR63Q8IWG1 891 aa19.5■□□□□ 0.71
PKD1-236ENST00000568796 C9orf78Q9NZ63 289 aaPredicted RBP19.5■□□□□ 0.71
PKD1-236ENST00000568796 RASA3Q14644 834 aa19.49■□□□□ 0.71
PKD1-236ENST00000568796 NCBP3Q53F19 620 aaKnown RBP19.49■□□□□ 0.71
PKD1-236ENST00000568796 OTUD7BQ6GQQ9 843 aa19.49■□□□□ 0.71
PKD1-236ENST00000568796 CACNA1FO60840 1977 aa19.49■□□□□ 0.71
PKD1-236ENST00000568796 AOX1Q06278 1338 aa19.49■□□□□ 0.71
PKD1-236ENST00000568796 SSC5DA1L4H1 1573 aa19.49■□□□□ 0.71
PKD1-236ENST00000568796 GRM8O00222 908 aa19.48■□□□□ 0.71
PKD1-236ENST00000568796 IGF2BP3O00425 579 aaKnown RBP eCLIP19.48■□□□□ 0.71
PKD1-236ENST00000568796 SLC4A10Q6U841 1118 aa19.48■□□□□ 0.71
PKD1-236ENST00000568796 PCDH10Q9P2E7 1040 aa19.48■□□□□ 0.71
PKD1-236ENST00000568796 USP2O75604 605 aaPredicted RBP19.47■□□□□ 0.71
PKD1-236ENST00000568796 MFSD14BQ5SR56 506 aa19.47■□□□□ 0.71
PKD1-236ENST00000568796 TTF2Q9UNY4 1162 aaKnown RBP19.47■□□□□ 0.71
PKD1-236ENST00000568796 UNCXA6NJT0 531 aa19.46■□□□□ 0.71
PKD1-236ENST00000568796 GYG1P46976 350 aa19.46■□□□□ 0.71
PKD1-236ENST00000568796 TNFAIP1Q13829 316 aa19.46■□□□□ 0.71
PKD1-236ENST00000568796 OTOP1Q7RTM1 612 aa19.46■□□□□ 0.71
PKD1-236ENST00000568796 ANKRD13AQ8IZ07 590 aa19.46■□□□□ 0.71
PKD1-236ENST00000568796 ELP3Q9H9T3 547 aa19.46■□□□□ 0.71
PKD1-236ENST00000568796 HIBADHP31937 336 aaKnown RBP19.45■□□□□ 0.7
PKD1-236ENST00000568796 GJA5P36382 358 aa19.45■□□□□ 0.7
PKD1-236ENST00000568796 ERO1AQ96HE7 468 aa19.45■□□□□ 0.7
PKD1-236ENST00000568796 TDRD3Q9H7E2 651 aaKnown RBP19.45■□□□□ 0.7
PKD1-236ENST00000568796 ZNF70Q9UC06 446 aaPredicted RBP19.45■□□□□ 0.7
PKD1-236ENST00000568796 ECM29Q5VYK3 1845 aa19.44■□□□□ 0.7
PKD1-236ENST00000568796 CRHR2Q13324 411 aa19.44■□□□□ 0.7
PKD1-236ENST00000568796 UBE4AQ14139 1066 aa19.44■□□□□ 0.7
PKD1-236ENST00000568796 SPDYE2Q495Y8 402 aa19.44■□□□□ 0.7
PKD1-236ENST00000568796 TDRD7Q8NHU6 1098 aaKnown RBP19.44■□□□□ 0.7
PKD1-236ENST00000568796 CD99L2Q8TCZ2 262 aa19.44■□□□□ 0.7
PKD1-236ENST00000568796 SRCIN1Q9C0H9 1055 aa19.44■□□□□ 0.7
PKD1-236ENST00000568796 FAM205AQ6ZU69 1335 aa19.44■□□□□ 0.7
PKD1-236ENST00000568796 A0A1B0GUL6 1792 aa19.43■□□□□ 0.7
PKD1-236ENST00000568796 TCP10L2B9ZVM9 353 aa19.43■□□□□ 0.7
PKD1-236ENST00000568796 ANP32CO43423 234 aa19.43■□□□□ 0.7
PKD1-236ENST00000568796 ALDH1L1O75891 902 aa19.43■□□□□ 0.7
PKD1-236ENST00000568796 VPS37DQ86XT2 251 aa19.43■□□□□ 0.7
PKD1-236ENST00000568796 OPTNQ96CV9 577 aa19.43■□□□□ 0.7
PKD1-236ENST00000568796 FAM84BQ96KN1 310 aaPredicted RBP19.43■□□□□ 0.7
PKD1-236ENST00000568796 PUS3Q9BZE2 481 aaKnown RBP19.43■□□□□ 0.7
PKD1-236ENST00000568796 SPINK5Q9NQ38 1064 aaPredicted RBP19.43■□□□□ 0.7
PKD1-236ENST00000568796 SERPINA10Q9UK55 444 aa19.43■□□□□ 0.7
PKD1-236ENST00000568796 CHAF1AQ13111 956 aaPredicted RBP19.42■□□□□ 0.7
PKD1-236ENST00000568796 INTS3Q68E01 1043 aaKnown RBP19.42■□□□□ 0.7
PKD1-236ENST00000568796 DZIP1LQ8IYY4 767 aaKnown RBP19.42■□□□□ 0.7
PKD1-236ENST00000568796 SUCLG2Q96I99 432 aa19.42■□□□□ 0.7
PKD1-236ENST00000568796 EFCC1Q9HA90 598 aa19.42■□□□□ 0.7
PKD1-236ENST00000568796 IQSEC3Q9UPP2 1182 aaPredicted RBP19.42■□□□□ 0.7
PKD1-236ENST00000568796 FRAT2O75474 233 aaPredicted RBP19.41■□□□□ 0.7
PKD1-236ENST00000568796 CRKP46108 304 aa19.41■□□□□ 0.7
PKD1-236ENST00000568796 TNNI2P48788 182 aa19.41■□□□□ 0.7
PKD1-236ENST00000568796 SP3Q02447 781 aa19.41■□□□□ 0.7
PKD1-236ENST00000568796 CDAN1Q8IWY9 1227 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms