RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 BCL11AQ9H165 835 aa22.08■■□□□ 1.13
COMMD4-222ENST00000568034 WDR90Q96KV7 1748 aa22.08■■□□□ 1.12
COMMD4-222ENST00000568034 SALL3Q9BXA9 1300 aa22.07■■□□□ 1.12
COMMD4-222ENST00000568034 SEMA3EO15041 775 aa22.07■■□□□ 1.12
COMMD4-222ENST00000568034 MCAMP43121 646 aa22.07■■□□□ 1.12
COMMD4-222ENST00000568034 TNIP1Q15025 636 aa22.07■■□□□ 1.12
COMMD4-222ENST00000568034 GORABQ5T7V8 394 aa22.07■■□□□ 1.12
COMMD4-222ENST00000568034 CERS5Q8N5B7 392 aa22.07■■□□□ 1.12
COMMD4-222ENST00000568034 ZNF512BQ96KM6 892 aaPredicted RBP22.07■■□□□ 1.12
COMMD4-222ENST00000568034 GMLQ99445 158 aa22.07■■□□□ 1.12
COMMD4-222ENST00000568034 ZBTB12Q9Y330 459 aaPredicted RBP22.07■■□□□ 1.12
COMMD4-222ENST00000568034 GJA3Q9Y6H8 435 aa22.07■■□□□ 1.12
COMMD4-222ENST00000568034 RSBN1LQ6PCB5 846 aaPredicted RBP22.06■■□□□ 1.12
COMMD4-222ENST00000568034 L3MBTL3Q96JM7 780 aaPredicted RBP22.06■■□□□ 1.12
COMMD4-222ENST00000568034 LNPKQ9C0E8 428 aa22.06■■□□□ 1.12
COMMD4-222ENST00000568034 GNL3LQ9NVN8 582 aaKnown RBP22.06■■□□□ 1.12
COMMD4-222ENST00000568034 HMG20BQ9P0W2 317 aa22.06■■□□□ 1.12
COMMD4-222ENST00000568034 PDS5AQ29RF7 1337 aaKnown RBP22.06■■□□□ 1.12
COMMD4-222ENST00000568034 UQCRFS1P1P0C7P4 283 aa22.05■■□□□ 1.12
COMMD4-222ENST00000568034 SCNN1DP51172 638 aa22.05■■□□□ 1.12
COMMD4-222ENST00000568034 FKBP1AP62942 108 aaKnown RBP22.05■■□□□ 1.12
COMMD4-222ENST00000568034 CHAF1AQ13111 956 aaPredicted RBP22.05■■□□□ 1.12
COMMD4-222ENST00000568034 CCDC158Q5M9N0 1113 aa22.05■■□□□ 1.12
COMMD4-222ENST00000568034 TTC39AQ5SRH9 613 aa22.05■■□□□ 1.12
COMMD4-222ENST00000568034 DPY19L2Q6NUT2 758 aa22.05■■□□□ 1.12
COMMD4-222ENST00000568034 PI16Q6UXB8 463 aa22.05■■□□□ 1.12
COMMD4-222ENST00000568034 CHD1LQ86WJ1 897 aa22.05■■□□□ 1.12
COMMD4-222ENST00000568034 FBXW7Q969H0 707 aa22.05■■□□□ 1.12
COMMD4-222ENST00000568034 DENND2AQ9ULE3 1009 aa22.05■■□□□ 1.12
COMMD4-222ENST00000568034 POTECB2RU33 542 aa22.04■■□□□ 1.12
COMMD4-222ENST00000568034 GMPSP49915 693 aaPredicted RBP22.04■■□□□ 1.12
COMMD4-222ENST00000568034 GRIK5Q16478 980 aa22.04■■□□□ 1.12
COMMD4-222ENST00000568034 FRAT2O75474 233 aaPredicted RBP22.03■■□□□ 1.12
COMMD4-222ENST00000568034 SHTN1A0MZ66 631 aa22.02■■□□□ 1.12
COMMD4-222ENST00000568034 RPS12P25398 132 aaKnown RBP22.02■■□□□ 1.12
COMMD4-222ENST00000568034 MFSD14BQ5SR56 506 aa22.02■■□□□ 1.12
COMMD4-222ENST00000568034 TSHZ3Q63HK5 1081 aa22.02■■□□□ 1.12
COMMD4-222ENST00000568034 CENPQQ7L2Z9 268 aaPredicted RBP22.02■■□□□ 1.12
COMMD4-222ENST00000568034 SPATA5Q8NB90 893 aa22.02■■□□□ 1.12
COMMD4-222ENST00000568034 ZNF784Q8NCA9 323 aaPredicted RBP22.02■■□□□ 1.12
COMMD4-222ENST00000568034 AGBL3Q8NEM8 1001 aa22.02■■□□□ 1.12
COMMD4-222ENST00000568034 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.02■■□□□ 1.12
COMMD4-222ENST00000568034 CCDC136Q96JN2 1154 aa22.02■■□□□ 1.12
COMMD4-222ENST00000568034 PPP4R2Q9NY27 417 aa22.02■■□□□ 1.12
COMMD4-222ENST00000568034 MYO3BQ8WXR4 1341 aa22.02■■□□□ 1.12
COMMD4-222ENST00000568034 SALL1Q9NSC2 1324 aa22.02■■□□□ 1.12
COMMD4-222ENST00000568034 WDR66Q8TBY9 1149 aa22.01■■□□□ 1.11
COMMD4-222ENST00000568034 DPF2Q92785 391 aa22.01■■□□□ 1.11
COMMD4-222ENST00000568034 ECHDC1Q9NTX5 307 aa22.01■■□□□ 1.11
COMMD4-222ENST00000568034 ATP5JP18859 108 aa22■■□□□ 1.11
COMMD4-222ENST00000568034 PDE4AP27815 886 aa22■■□□□ 1.11
COMMD4-222ENST00000568034 ZNF526Q8TF50 670 aaPredicted RBP22■■□□□ 1.11
COMMD4-222ENST00000568034 TBC1D22AQ8WUA7 517 aa22■■□□□ 1.11
COMMD4-222ENST00000568034 SNRKQ9NRH2 765 aa22■■□□□ 1.11
COMMD4-222ENST00000568034 GPRC5DQ9NZD1 345 aa22■■□□□ 1.11
COMMD4-222ENST00000568034 NDUFB9Q9Y6M9 179 aa22■■□□□ 1.11
COMMD4-222ENST00000568034 SCN4AP35499 1836 aa22■■□□□ 1.11
COMMD4-222ENST00000568034 MX1P20591 662 aa21.99■■□□□ 1.11
COMMD4-222ENST00000568034 ZAP70P43403 619 aa21.99■■□□□ 1.11
COMMD4-222ENST00000568034 PI4K2BQ8TCG2 481 aa21.99■■□□□ 1.11
COMMD4-222ENST00000568034 NMRK2Q9NPI5 230 aa21.99■■□□□ 1.11
COMMD4-222ENST00000568034 ZBTB47Q9UFB7 747 aaPredicted RBP21.99■■□□□ 1.11
COMMD4-222ENST00000568034 CYP2E1P05181 493 aaPredicted RBP21.98■■□□□ 1.11
COMMD4-222ENST00000568034 EPS15P42566 896 aa21.98■■□□□ 1.11
COMMD4-222ENST00000568034 ZNF280AP59817 542 aaPredicted RBP21.98■■□□□ 1.11
COMMD4-222ENST00000568034 KIAA0825Q8IV33 1275 aa21.98■■□□□ 1.11
COMMD4-222ENST00000568034 MICALL2Q8IY33 904 aa21.98■■□□□ 1.11
COMMD4-222ENST00000568034 BOLA2Q9H3K6 86 aa21.98■■□□□ 1.11
COMMD4-222ENST00000568034 STAP2Q9UGK3 403 aa21.98■■□□□ 1.11
COMMD4-222ENST00000568034 TTC41PQ6P2S7 1318 aa21.98■■□□□ 1.11
COMMD4-222ENST00000568034 PRDX5P30044 214 aa21.97■■□□□ 1.11
COMMD4-222ENST00000568034 PDE1AP54750 535 aa21.97■■□□□ 1.11
COMMD4-222ENST00000568034 CNOT7Q9UIV1 285 aaKnown RBP21.97■■□□□ 1.11
COMMD4-222ENST00000568034 USP17L8P0C7I0 530 aa21.96■■□□□ 1.11
COMMD4-222ENST00000568034 TBC1D9Q6ZT07 1266 aa21.96■■□□□ 1.11
COMMD4-222ENST00000568034 PLEKHM2Q8IWE5 1019 aa21.96■■□□□ 1.11
COMMD4-222ENST00000568034 GPATCH3Q96I76 525 aa21.96■■□□□ 1.11
COMMD4-222ENST00000568034 HAUS7Q99871 368 aa21.96■■□□□ 1.11
COMMD4-222ENST00000568034 ANTXR1Q9H6X2 564 aa21.96■■□□□ 1.11
COMMD4-222ENST00000568034 RRAGCQ9HB90 399 aa21.96■■□□□ 1.11
COMMD4-222ENST00000568034 PIH1D3Q9NQM4 214 aaKnown RBP21.96■■□□□ 1.11
COMMD4-222ENST00000568034 HACL1Q9UJ83 578 aa21.96■■□□□ 1.11
COMMD4-222ENST00000568034 SUGT1Q9Y2Z0 365 aa21.96■■□□□ 1.11
COMMD4-222ENST00000568034 ADAMTSL1Q8N6G6 1762 aa21.96■■□□□ 1.11
COMMD4-222ENST00000568034 MYO5AQ9Y4I1 1855 aaKnown RBP21.96■■□□□ 1.11
COMMD4-222ENST00000568034 DOCK2Q92608 1830 aa21.95■■□□□ 1.1
COMMD4-222ENST00000568034 F8W031 263 aaPredicted RBP21.95■■□□□ 1.1
COMMD4-222ENST00000568034 EGFRP00533 1210 aa21.95■■□□□ 1.1
COMMD4-222ENST00000568034 EDC3Q96F86 508 aaKnown RBP21.95■■□□□ 1.1
COMMD4-222ENST00000568034 TAF1DQ9H5J8 278 aaPredicted RBP21.95■■□□□ 1.1
COMMD4-222ENST00000568034 IQCA1LA6NCM1 817 aa21.94■■□□□ 1.1
COMMD4-222ENST00000568034 LMOD1P29536 600 aaPredicted RBP21.94■■□□□ 1.1
COMMD4-222ENST00000568034 ZGPATQ8N5A5 531 aaKnown RBP21.94■■□□□ 1.1
COMMD4-222ENST00000568034 TRPM4Q8TD43 1214 aa21.94■■□□□ 1.1
COMMD4-222ENST00000568034 ZNF384Q8TF68 577 aa21.94■■□□□ 1.1
COMMD4-222ENST00000568034 OSBPL3Q9H4L5 887 aa21.94■■□□□ 1.1
COMMD4-222ENST00000568034 ABCF2Q9UG63 623 aa21.94■■□□□ 1.1
COMMD4-222ENST00000568034 TTF2Q9UNY4 1162 aaKnown RBP21.94■■□□□ 1.1
COMMD4-222ENST00000568034 EPHX2P34913 555 aa21.93■■□□□ 1.1
COMMD4-222ENST00000568034 AOX1Q06278 1338 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms