RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 EAPPQ56P03 285 aaPredicted RBP10.61□□□□□ -0.71
UBR1-204ENST00000563239 SAMD7Q7Z3H4 446 aa10.61□□□□□ -0.71
UBR1-204ENST00000563239 PGAP2Q9UHJ9 254 aa10.61□□□□□ -0.71
UBR1-204ENST00000563239 JAG2Q9Y219 1238 aa10.61□□□□□ -0.71
UBR1-204ENST00000563239 IFIT1P09914 478 aaKnown RBP10.6□□□□□ -0.71
UBR1-204ENST00000563239 HSPA6P17066 643 aa10.6□□□□□ -0.71
UBR1-204ENST00000563239 ADORA1P30542 326 aa10.6□□□□□ -0.71
UBR1-204ENST00000563239 TIMM10P62072 90 aa10.6□□□□□ -0.71
UBR1-204ENST00000563239 FBXW7Q969H0 707 aa10.6□□□□□ -0.71
UBR1-204ENST00000563239 H7C1D1 291 aa10.59□□□□□ -0.71
UBR1-204ENST00000563239 SURF6O75683 361 aaKnown RBP10.59□□□□□ -0.71
UBR1-204ENST00000563239 USP17L8P0C7I0 530 aa10.59□□□□□ -0.71
UBR1-204ENST00000563239 SLC5A1P13866 664 aa10.59□□□□□ -0.71
UBR1-204ENST00000563239 FKBP1AP62942 108 aaKnown RBP10.59□□□□□ -0.71
UBR1-204ENST00000563239 G3BP1Q13283 466 aaKnown RBP eCLIP10.59□□□□□ -0.71
UBR1-204ENST00000563239 GRIK5Q16478 980 aa10.59□□□□□ -0.71
UBR1-204ENST00000563239 TBC1D10BQ4KMP7 808 aaPredicted RBP10.59□□□□□ -0.71
UBR1-204ENST00000563239 MAP1SQ66K74 1059 aaPredicted RBP10.59□□□□□ -0.71
UBR1-204ENST00000563239 RPAP2Q8IXW5 612 aaPredicted RBP10.59□□□□□ -0.71
UBR1-204ENST00000563239 IQSEC3Q9UPP2 1182 aaPredicted RBP10.59□□□□□ -0.71
UBR1-204ENST00000563239 COL1A1P02452 1464 aaPredicted RBP10.59□□□□□ -0.71
UBR1-204ENST00000563239 ASTN2O75129 1339 aaPredicted RBP10.58□□□□□ -0.71
UBR1-204ENST00000563239 MYO3BQ8WXR4 1341 aa10.58□□□□□ -0.71
UBR1-204ENST00000563239 PASKQ96RG2 1323 aa10.58□□□□□ -0.71
UBR1-204ENST00000563239 ARAP2Q8WZ64 1704 aa10.58□□□□□ -0.72
UBR1-204ENST00000563239 A0A1B0GUL7 405 aa10.58□□□□□ -0.72
UBR1-204ENST00000563239 PHKA1P46020 1223 aa10.58□□□□□ -0.72
UBR1-204ENST00000563239 KIF4BQ2VIQ3 1234 aa10.58□□□□□ -0.72
UBR1-204ENST00000563239 CAVIN4Q5BKX8 364 aa10.58□□□□□ -0.72
UBR1-204ENST00000563239 RBM26Q5T8P6 1007 aaKnown RBP10.58□□□□□ -0.72
UBR1-204ENST00000563239 KIAA0825Q8IV33 1275 aa10.58□□□□□ -0.72
UBR1-204ENST00000563239 CNTROBQ8N137 903 aa10.58□□□□□ -0.72
UBR1-204ENST00000563239 ZC3H15Q8WU90 426 aaKnown RBP10.58□□□□□ -0.72
UBR1-204ENST00000563239 XAGE2Q96GT9 111 aa10.58□□□□□ -0.72
UBR1-204ENST00000563239 ZBED3Q96IU2 234 aaPredicted RBP10.58□□□□□ -0.72
UBR1-204ENST00000563239 MYOZ2Q9NPC6 264 aa10.58□□□□□ -0.72
UBR1-204ENST00000563239 CLEC11AQ9Y240 323 aa10.58□□□□□ -0.72
UBR1-204ENST00000563239 FMR1Q06787 632 aaKnown RBP eCLIP10.57□□□□□ -0.72
UBR1-204ENST00000563239 CCDC102BQ68D86 513 aa10.57□□□□□ -0.72
UBR1-204ENST00000563239 DLK2Q6UY11 383 aa10.57□□□□□ -0.72
UBR1-204ENST00000563239 VPS37DQ86XT2 251 aa10.57□□□□□ -0.72
UBR1-204ENST00000563239 CRBNQ96SW2 442 aa10.57□□□□□ -0.72
UBR1-204ENST00000563239 CHMP4BQ9H444 224 aaKnown RBP10.57□□□□□ -0.72
UBR1-204ENST00000563239 GPR108Q9NPR9 543 aa10.57□□□□□ -0.72
UBR1-204ENST00000563239 EXOC6BQ9Y2D4 811 aa10.57□□□□□ -0.72
UBR1-204ENST00000563239 AKAP2Q9Y2D5 859 aa10.57□□□□□ -0.72
UBR1-204ENST00000563239 PCDHAC2Q9Y5I4 1007 aa10.57□□□□□ -0.72
UBR1-204ENST00000563239 AOX1Q06278 1338 aa10.57□□□□□ -0.72
UBR1-204ENST00000563239 TRAF5O00463 557 aa10.56□□□□□ -0.72
UBR1-204ENST00000563239 CHAF1AQ13111 956 aaPredicted RBP10.56□□□□□ -0.72
UBR1-204ENST00000563239 SCARF1Q14162 830 aa10.56□□□□□ -0.72
UBR1-204ENST00000563239 NBPF9Q3BBW0 867 aa10.56□□□□□ -0.72
UBR1-204ENST00000563239 TNNI3KQ59H18 835 aa10.56□□□□□ -0.72
UBR1-204ENST00000563239 MFSD14BQ5SR56 506 aa10.56□□□□□ -0.72
UBR1-204ENST00000563239 PCDHB15Q9Y5E8 787 aa10.56□□□□□ -0.72
UBR1-204ENST00000563239 FPGT-TNNI3KV9GXZ4 949 aa10.56□□□□□ -0.72
UBR1-204ENST00000563239 F8W031 263 aaPredicted RBP10.55□□□□□ -0.72
UBR1-204ENST00000563239 WNT10BO00744 389 aa10.55□□□□□ -0.72
UBR1-204ENST00000563239 MMP14P50281 582 aa10.55□□□□□ -0.72
UBR1-204ENST00000563239 APLP1P51693 650 aa10.55□□□□□ -0.72
UBR1-204ENST00000563239 HTRA3P83110 453 aa10.55□□□□□ -0.72
UBR1-204ENST00000563239 OS9Q13438 667 aaPredicted RBP10.55□□□□□ -0.72
UBR1-204ENST00000563239 RASGRF1Q13972 1273 aa10.55□□□□□ -0.72
UBR1-204ENST00000563239 MTMR14Q8NCE2 650 aa10.55□□□□□ -0.72
UBR1-204ENST00000563239 EAF2Q96CJ1 260 aaPredicted RBP10.55□□□□□ -0.72
UBR1-204ENST00000563239 NEUROD6Q96NK8 337 aa10.55□□□□□ -0.72
UBR1-204ENST00000563239 GLIS2Q9BZE0 524 aaPredicted RBP10.55□□□□□ -0.72
UBR1-204ENST00000563239 SUPT16HQ9Y5B9 1047 aaKnown RBP10.55□□□□□ -0.72
UBR1-204ENST00000563239 SEMA3EO15041 775 aa10.54□□□□□ -0.72
UBR1-204ENST00000563239 HMMRO75330 724 aa10.54□□□□□ -0.72
UBR1-204ENST00000563239 ANGEL2Q5VTE6 544 aaKnown RBP10.54□□□□□ -0.72
UBR1-204ENST00000563239 CST9Q5W186 159 aa10.54□□□□□ -0.72
UBR1-204ENST00000563239 USP48Q86UV5 1035 aa10.54□□□□□ -0.72
UBR1-204ENST00000563239 OGFOD1Q8N543 542 aa10.54□□□□□ -0.72
UBR1-204ENST00000563239 DNAJC5GQ8N7S2 189 aa10.54□□□□□ -0.72
UBR1-204ENST00000563239 DBNDD2Q9BQY9 259 aa10.54□□□□□ -0.72
UBR1-204ENST00000563239 TLR7Q9NYK1 1049 aaKnown RBP10.54□□□□□ -0.72
UBR1-204ENST00000563239 GGA3Q9NZ52 723 aa10.54□□□□□ -0.72
UBR1-204ENST00000563239 DBNLQ9UJU6 430 aaKnown RBP10.54□□□□□ -0.72
UBR1-204ENST00000563239 ADM5C9JUS6 153 aa10.53□□□□□ -0.72
UBR1-204ENST00000563239 FRAT2O75474 233 aaPredicted RBP10.53□□□□□ -0.72
UBR1-204ENST00000563239 ARID4AP29374 1257 aaPredicted RBP10.53□□□□□ -0.72
UBR1-204ENST00000563239 CFAP100Q494V2 611 aa10.53□□□□□ -0.72
UBR1-204ENST00000563239 PI16Q6UXB8 463 aa10.53□□□□□ -0.72
UBR1-204ENST00000563239 CDC37L1Q7L3B6 337 aa10.53□□□□□ -0.72
UBR1-204ENST00000563239 WDR66Q8TBY9 1149 aa10.53□□□□□ -0.72
UBR1-204ENST00000563239 RHPN1Q8TCX5 695 aa10.53□□□□□ -0.72
UBR1-204ENST00000563239 TBC1D22AQ8WUA7 517 aa10.53□□□□□ -0.72
UBR1-204ENST00000563239 PRMT6Q96LA8 375 aaPredicted RBP10.53□□□□□ -0.72
UBR1-204ENST00000563239 CCDC8Q9H0W5 538 aaPredicted RBP10.53□□□□□ -0.72
UBR1-204ENST00000563239 GNL3LQ9NVN8 582 aaKnown RBP10.53□□□□□ -0.72
UBR1-204ENST00000563239 HMG20BQ9P0W2 317 aa10.53□□□□□ -0.72
UBR1-204ENST00000563239 HDAC9Q9UKV0 1011 aa10.53□□□□□ -0.72
UBR1-204ENST00000563239 DENND2AQ9ULE3 1009 aa10.53□□□□□ -0.72
UBR1-204ENST00000563239 TTF2Q9UNY4 1162 aaKnown RBP10.53□□□□□ -0.72
UBR1-204ENST00000563239 SCAF8Q9UPN6 1271 aaKnown RBP10.53□□□□□ -0.72
UBR1-204ENST00000563239 PDS5AQ29RF7 1337 aaKnown RBP10.53□□□□□ -0.72
UBR1-204ENST00000563239 SALL1Q9NSC2 1324 aa10.53□□□□□ -0.72
UBR1-204ENST00000563239 SPDYE2BA6NHP3 402 aa10.52□□□□□ -0.73
UBR1-204ENST00000563239 SPDYE6P0CI01 402 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms