RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 SOX13Q9UN79 622 aa10.63□□□□□ -0.71
SMG1-204ENST00000561940 PNMA6FA0A0J9YX94 578 aa10.62□□□□□ -0.71
SMG1-204ENST00000561940 RBM47A0AV96 593 aaKnown RBP10.62□□□□□ -0.71
SMG1-204ENST00000561940 H3BRJ5 948 aa10.62□□□□□ -0.71
SMG1-204ENST00000561940 TREHO43280 583 aa10.62□□□□□ -0.71
SMG1-204ENST00000561940 ALX3O95076 343 aa10.62□□□□□ -0.71
SMG1-204ENST00000561940 GRIA4P48058 902 aa10.62□□□□□ -0.71
SMG1-204ENST00000561940 TAGLNQ01995 201 aaKnown RBP10.62□□□□□ -0.71
SMG1-204ENST00000561940 DOC2BQ14184 412 aa10.62□□□□□ -0.71
SMG1-204ENST00000561940 MBTPS1Q14703 1052 aa10.62□□□□□ -0.71
SMG1-204ENST00000561940 TCF12Q99081 682 aa10.62□□□□□ -0.71
SMG1-204ENST00000561940 BCL2L13Q9BXK5 485 aa10.62□□□□□ -0.71
SMG1-204ENST00000561940 BHLHE41Q9C0J9 482 aaPredicted RBP10.62□□□□□ -0.71
SMG1-204ENST00000561940 VN1R5Q7Z5H4 357 aa10.61□□□□□ -0.71
SMG1-204ENST00000561940 CCNJLQ8IV13 435 aa10.61□□□□□ -0.71
SMG1-204ENST00000561940 GIPC2Q8TF65 315 aa10.61□□□□□ -0.71
SMG1-204ENST00000561940 SETDB2Q96T68 719 aa10.61□□□□□ -0.71
SMG1-204ENST00000561940 SEC31BQ9NQW1 1179 aa10.61□□□□□ -0.71
SMG1-204ENST00000561940 A0A096LPE4 126 aa10.6□□□□□ -0.71
SMG1-204ENST00000561940 A0A1W2PPZ6 126 aa10.6□□□□□ -0.71
SMG1-204ENST00000561940 SOX1O00570 391 aaPredicted RBP10.6□□□□□ -0.71
SMG1-204ENST00000561940 CD68P34810 354 aaPredicted RBP10.6□□□□□ -0.71
SMG1-204ENST00000561940 IREB2P48200 963 aaKnown RBP10.6□□□□□ -0.71
SMG1-204ENST00000561940 ADGRE1Q14246 886 aa10.6□□□□□ -0.71
SMG1-204ENST00000561940 FOXD4L6Q3SYB3 417 aaPredicted RBP10.6□□□□□ -0.71
SMG1-204ENST00000561940 KIAA0319Q5VV43 1072 aa10.6□□□□□ -0.71
SMG1-204ENST00000561940 FOXD4L3Q6VB84 417 aaPredicted RBP10.6□□□□□ -0.71
SMG1-204ENST00000561940 MAP4K3Q8IVH8 894 aa10.6□□□□□ -0.71
SMG1-204ENST00000561940 ZNF16P17020 682 aaPredicted RBP10.59□□□□□ -0.71
SMG1-204ENST00000561940 NRG1Q02297 640 aaPredicted RBP10.59□□□□□ -0.71
SMG1-204ENST00000561940 IKBKEQ14164 716 aa10.59□□□□□ -0.71
SMG1-204ENST00000561940 FBXO33Q7Z6M2 555 aa10.59□□□□□ -0.71
SMG1-204ENST00000561940 SRA1Q9HD15 236 aaKnown RBP10.59□□□□□ -0.71
SMG1-204ENST00000561940 WWC3Q9ULE0 1092 aa10.59□□□□□ -0.71
SMG1-204ENST00000561940 WISP1O95388 367 aa10.58□□□□□ -0.72
SMG1-204ENST00000561940 NLRP12P59046 1061 aa10.58□□□□□ -0.72
SMG1-204ENST00000561940 AGGF1Q8N302 714 aaeCLIP10.58□□□□□ -0.72
SMG1-204ENST00000561940 WFDC12Q8WWY7 111 aa10.58□□□□□ -0.72
SMG1-204ENST00000561940 NLRP2Q9NX02 1062 aa10.58□□□□□ -0.72
SMG1-204ENST00000561940 TM4SF5O14894 197 aa10.57□□□□□ -0.72
SMG1-204ENST00000561940 FURINP09958 794 aa10.57□□□□□ -0.72
SMG1-204ENST00000561940 NOS3P29474 1203 aa10.57□□□□□ -0.72
SMG1-204ENST00000561940 PIP4K2BP78356 416 aa10.57□□□□□ -0.72
SMG1-204ENST00000561940 ENOX2Q16206 610 aaKnown RBP10.57□□□□□ -0.72
SMG1-204ENST00000561940 TXNRD3Q86VQ6 643 aa10.57□□□□□ -0.72
SMG1-204ENST00000561940 KLHL23Q8NBE8 558 aa10.57□□□□□ -0.72
SMG1-204ENST00000561940 ADAM11O75078 769 aa10.56□□□□□ -0.72
SMG1-204ENST00000561940 P4HBP07237 508 aaKnown RBP10.56□□□□□ -0.72
SMG1-204ENST00000561940 ARL4DP49703 201 aa10.56□□□□□ -0.72
SMG1-204ENST00000561940 GRM2Q14416 872 aa10.56□□□□□ -0.72
SMG1-204ENST00000561940 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.56□□□□□ -0.72
SMG1-204ENST00000561940 MRPL18Q9H0U6 180 aaKnown RBP10.56□□□□□ -0.72
SMG1-204ENST00000561940 ESRRAP11474 423 aaPredicted RBP10.55□□□□□ -0.72
SMG1-204ENST00000561940 C19orf57Q0VDD7 668 aa10.55□□□□□ -0.72
SMG1-204ENST00000561940 SUZ12Q15022 739 aaKnown RBP10.55□□□□□ -0.72
SMG1-204ENST00000561940 ACAD11Q709F0 780 aa10.55□□□□□ -0.72
SMG1-204ENST00000561940 UBASH3BQ8TF42 649 aa10.55□□□□□ -0.72
SMG1-204ENST00000561940 AKTIPQ9H8T0 292 aa10.55□□□□□ -0.72
SMG1-204ENST00000561940 TPSG1Q9NRR2 321 aa10.55□□□□□ -0.72
SMG1-204ENST00000561940 F8W735 103 aaPredicted RBP10.54□□□□□ -0.72
SMG1-204ENST00000561940 FMR1Q06787 632 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMG1-204ENST00000561940 PCDH1Q08174 1060 aa10.54□□□□□ -0.72
SMG1-204ENST00000561940 DUOXA2Q1HG44 320 aa10.54□□□□□ -0.72
SMG1-204ENST00000561940 ZNF423Q2M1K9 1284 aa10.54□□□□□ -0.72
SMG1-204ENST00000561940 OSGEPQ9NPF4 335 aa10.54□□□□□ -0.72
SMG1-204ENST00000561940 KIAA1522Q9P206 1035 aaPredicted RBP10.54□□□□□ -0.72
SMG1-204ENST00000561940 E9PSI1 815 aa10.53□□□□□ -0.72
SMG1-204ENST00000561940 GSTM4Q03013 218 aa10.53□□□□□ -0.72
SMG1-204ENST00000561940 GLIS3Q8NEA6 775 aa10.53□□□□□ -0.72
SMG1-204ENST00000561940 DCAF11Q8TEB1 546 aa10.53□□□□□ -0.72
SMG1-204ENST00000561940 WNT8BQ93098 351 aa10.53□□□□□ -0.72
SMG1-204ENST00000561940 ABCB6Q9NP58 842 aa10.53□□□□□ -0.72
SMG1-204ENST00000561940 TMEM238LA0A1B0GVL6 79 aa10.52□□□□□ -0.73
SMG1-204ENST00000561940 ZNF157P51786 506 aaPredicted RBP10.52□□□□□ -0.73
SMG1-204ENST00000561940 FCGRTP55899 365 aa10.52□□□□□ -0.73
SMG1-204ENST00000561940 NXPE4Q6UWF7 544 aa10.52□□□□□ -0.73
SMG1-204ENST00000561940 BCO2Q9BYV7 579 aa10.52□□□□□ -0.73
SMG1-204ENST00000561940 CLEC4MQ9H2X3 399 aaPredicted RBP10.52□□□□□ -0.73
SMG1-204ENST00000561940 EAPPQ56P03 285 aaPredicted RBP10.51□□□□□ -0.73
SMG1-204ENST00000561940 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.51□□□□□ -0.73
SMG1-204ENST00000561940 TMEM130Q8N3G9 435 aa10.51□□□□□ -0.73
SMG1-204ENST00000561940 TP53INP1Q96A56 240 aa10.51□□□□□ -0.73
SMG1-204ENST00000561940 MRRFQ96E11 262 aaKnown RBP10.51□□□□□ -0.73
SMG1-204ENST00000561940 MEGF10Q96KG7 1140 aa10.51□□□□□ -0.73
SMG1-204ENST00000561940 USP26Q9BXU7 913 aa10.51□□□□□ -0.73
SMG1-204ENST00000561940 GLB1P16278 677 aa10.5□□□□□ -0.73
SMG1-204ENST00000561940 KIAA1211Q6ZU35 1233 aa10.5□□□□□ -0.73
SMG1-204ENST00000561940 ZNF576Q9H609 170 aa10.5□□□□□ -0.73
SMG1-204ENST00000561940 TRAK1Q9UPV9 953 aa10.5□□□□□ -0.73
SMG1-204ENST00000561940 LDHBP07195 334 aaKnown RBP10.49□□□□□ -0.73
SMG1-204ENST00000561940 DTHD1Q6ZMT9 781 aa10.49□□□□□ -0.73
SMG1-204ENST00000561940 PPP4R2Q9NY27 417 aa10.49□□□□□ -0.73
SMG1-204ENST00000561940 ITPKAP23677 461 aa10.48□□□□□ -0.73
SMG1-204ENST00000561940 ATP2B2Q01814 1243 aa10.48□□□□□ -0.73
SMG1-204ENST00000561940 COL19A1Q14993 1142 aa10.48□□□□□ -0.73
SMG1-204ENST00000561940 PRPF40BQ6NWY9 871 aaKnown RBP10.48□□□□□ -0.73
SMG1-204ENST00000561940 RNF19AQ9NV58 838 aa10.48□□□□□ -0.73
SMG1-204ENST00000561940 AKAP2Q9Y2D5 859 aa10.48□□□□□ -0.73
SMG1-204ENST00000561940 ZNF326Q5BKZ1 582 aaKnown RBP10.47□□□□□ -0.73
SMG1-204ENST00000561940 ALG1LQ6GMV1 187 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms