RNA–Protein interactions for RNA: ENST00000561321.1

SEMA4B-220, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-220ENST00000561321 FAM84BQ96KN1 310 aaPredicted RBP15.42■□□□□ 0.06
SEMA4B-220ENST00000561321 LRRFIP2Q9Y608 721 aaKnown RBP15.42■□□□□ 0.06
SEMA4B-220ENST00000561321 THSD7BQ9C0I4 1608 aa15.42■□□□□ 0.06
SEMA4B-220ENST00000561321 RFX5P48382 616 aaPredicted RBP15.41■□□□□ 0.06
SEMA4B-220ENST00000561321 CTCFP49711 727 aaPredicted RBP15.41■□□□□ 0.06
SEMA4B-220ENST00000561321 MMP14P50281 582 aa15.41■□□□□ 0.06
SEMA4B-220ENST00000561321 PRAMEF18Q5VWM3 479 aa15.41■□□□□ 0.06
SEMA4B-220ENST00000561321 ARHGAP45Q92619 1136 aa15.41■□□□□ 0.06
SEMA4B-220ENST00000561321 MEIS3Q99687 375 aa15.41■□□□□ 0.06
SEMA4B-220ENST00000561321 SIL1Q9H173 461 aa15.41■□□□□ 0.06
SEMA4B-220ENST00000561321 IQSEC3Q9UPP2 1182 aaPredicted RBP15.41■□□□□ 0.06
SEMA4B-220ENST00000561321 IPO8O15397 1037 aaKnown RBP15.4■□□□□ 0.06
SEMA4B-220ENST00000561321 PDE8BO95263 885 aa15.4■□□□□ 0.06
SEMA4B-220ENST00000561321 PTPN12Q05209 780 aaKnown RBP15.4■□□□□ 0.06
SEMA4B-220ENST00000561321 DLGAP5Q15398 846 aa15.4■□□□□ 0.06
SEMA4B-220ENST00000561321 VGLL2Q8N8G2 317 aa15.4■□□□□ 0.06
SEMA4B-220ENST00000561321 TDRD7Q8NHU6 1098 aaKnown RBP15.4■□□□□ 0.06
SEMA4B-220ENST00000561321 BEGAINQ9BUH8 593 aa15.4■□□□□ 0.06
SEMA4B-220ENST00000561321 TNNQ9UQP3 1299 aa15.4■□□□□ 0.06
SEMA4B-220ENST00000561321 PCDHAC2Q9Y5I4 1007 aa15.4■□□□□ 0.06
SEMA4B-220ENST00000561321 EYA2O00167 538 aa15.39■□□□□ 0.05
SEMA4B-220ENST00000561321 FRAT2O75474 233 aaPredicted RBP15.39■□□□□ 0.05
SEMA4B-220ENST00000561321 TRIM27P14373 513 aa15.39■□□□□ 0.05
SEMA4B-220ENST00000561321 MAP2K2P36507 400 aa15.39■□□□□ 0.05
SEMA4B-220ENST00000561321 ZNF157P51786 506 aaPredicted RBP15.39■□□□□ 0.05
SEMA4B-220ENST00000561321 RBM5P52756 815 aaKnown RBP eCLIP15.39■□□□□ 0.05
SEMA4B-220ENST00000561321 LBX1P52954 281 aa15.39■□□□□ 0.05
SEMA4B-220ENST00000561321 FKBP1AP62942 108 aaKnown RBP15.39■□□□□ 0.05
SEMA4B-220ENST00000561321 CHAF1AQ13111 956 aaPredicted RBP15.39■□□□□ 0.05
SEMA4B-220ENST00000561321 PUM3Q15397 648 aaKnown RBP15.39■□□□□ 0.05
SEMA4B-220ENST00000561321 CAVIN4Q5BKX8 364 aa15.39■□□□□ 0.05
SEMA4B-220ENST00000561321 MFSD14BQ5SR56 506 aa15.39■□□□□ 0.05
SEMA4B-220ENST00000561321 INTS3Q68E01 1043 aaKnown RBP15.39■□□□□ 0.05
SEMA4B-220ENST00000561321 RGMBQ6NW40 437 aa15.39■□□□□ 0.05
SEMA4B-220ENST00000561321 TNS4Q8IZW8 715 aa15.39■□□□□ 0.05
SEMA4B-220ENST00000561321 CLUAP1Q96AJ1 413 aa15.39■□□□□ 0.05
SEMA4B-220ENST00000561321 BCAMP50895 628 aa15.38■□□□□ 0.05
SEMA4B-220ENST00000561321 TTLL12Q14166 644 aaPredicted RBP15.38■□□□□ 0.05
SEMA4B-220ENST00000561321 CFAP100Q494V2 611 aa15.38■□□□□ 0.05
SEMA4B-220ENST00000561321 ATF7IPQ6VMQ6 1270 aa15.38■□□□□ 0.05
SEMA4B-220ENST00000561321 MOB2Q70IA6 237 aa15.38■□□□□ 0.05
SEMA4B-220ENST00000561321 FBXO33Q7Z6M2 555 aa15.38■□□□□ 0.05
SEMA4B-220ENST00000561321 APOBEC3FQ8IUX4 373 aaKnown RBP15.38■□□□□ 0.05
SEMA4B-220ENST00000561321 ZBED3Q96IU2 234 aaPredicted RBP15.38■□□□□ 0.05
SEMA4B-220ENST00000561321 ZIC5Q96T25 663 aa15.38■□□□□ 0.05
SEMA4B-220ENST00000561321 HDAC5Q9UQL6 1122 aa15.38■□□□□ 0.05
SEMA4B-220ENST00000561321 FAM205AQ6ZU69 1335 aa15.38■□□□□ 0.05
SEMA4B-220ENST00000561321 CLRN2A0PK11 232 aa15.37■□□□□ 0.05
SEMA4B-220ENST00000561321 GNAI3P08754 354 aa15.37■□□□□ 0.05
SEMA4B-220ENST00000561321 IFIT1P09914 478 aaKnown RBP15.37■□□□□ 0.05
SEMA4B-220ENST00000561321 HSPA8P11142 646 aaKnown RBP15.37■□□□□ 0.05
SEMA4B-220ENST00000561321 ATG9AQ7Z3C6 839 aa15.37■□□□□ 0.05
SEMA4B-220ENST00000561321 TSKSQ9UJT2 592 aa15.37■□□□□ 0.05
SEMA4B-220ENST00000561321 TTF2Q9UNY4 1162 aaKnown RBP15.37■□□□□ 0.05
SEMA4B-220ENST00000561321 PA2G4Q9UQ80 394 aaKnown RBP15.37■□□□□ 0.05
SEMA4B-220ENST00000561321 ARAP2Q8WZ64 1704 aa15.37■□□□□ 0.05
SEMA4B-220ENST00000561321 PAPPA2Q9BXP8 1791 aa15.36■□□□□ 0.05
SEMA4B-220ENST00000561321 ECM29Q5VYK3 1845 aa15.36■□□□□ 0.05
SEMA4B-220ENST00000561321 SPDYE2BA6NHP3 402 aa15.36■□□□□ 0.05
SEMA4B-220ENST00000561321 MYO1BO43795 1136 aa15.36■□□□□ 0.05
SEMA4B-220ENST00000561321 SPDYE6P0CI01 402 aa15.36■□□□□ 0.05
SEMA4B-220ENST00000561321 SLC5A1P13866 664 aa15.36■□□□□ 0.05
SEMA4B-220ENST00000561321 FGFR2P21802 821 aa15.36■□□□□ 0.05
SEMA4B-220ENST00000561321 NOGQ13253 232 aa15.36■□□□□ 0.05
SEMA4B-220ENST00000561321 PRKG1Q13976 671 aa15.36■□□□□ 0.05
SEMA4B-220ENST00000561321 MTMR14Q8NCE2 650 aa15.36■□□□□ 0.05
SEMA4B-220ENST00000561321 PRMT6Q96LA8 375 aaPredicted RBP15.36■□□□□ 0.05
SEMA4B-220ENST00000561321 VEZTQ9HBM0 779 aa15.36■□□□□ 0.05
SEMA4B-220ENST00000561321 AOX1Q06278 1338 aa15.36■□□□□ 0.05
SEMA4B-220ENST00000561321 FAM155AB1AL88 458 aaPredicted RBP15.35■□□□□ 0.05
SEMA4B-220ENST00000561321 UBE2Q2LH0YL09 131 aa15.35■□□□□ 0.05
SEMA4B-220ENST00000561321 NF2P35240 595 aa15.35■□□□□ 0.05
SEMA4B-220ENST00000561321 LPIN2Q92539 896 aa15.35■□□□□ 0.05
SEMA4B-220ENST00000561321 CCDC102AQ96A19 550 aa15.35■□□□□ 0.05
SEMA4B-220ENST00000561321 PRDM10Q9NQV6 1147 aa15.35■□□□□ 0.05
SEMA4B-220ENST00000561321 ZBED9Q6R2W3 1325 aa15.35■□□□□ 0.05
SEMA4B-220ENST00000561321 SRGAP3O43295 1099 aa15.34■□□□□ 0.05
SEMA4B-220ENST00000561321 CAPN15O75808 1086 aa15.34■□□□□ 0.05
SEMA4B-220ENST00000561321 CIAO1O76071 339 aa15.34■□□□□ 0.05
SEMA4B-220ENST00000561321 SLC10A3P09131 477 aa15.34■□□□□ 0.05
SEMA4B-220ENST00000561321 FKBP1BP68106 108 aa15.34■□□□□ 0.05
SEMA4B-220ENST00000561321 GRIK5Q16478 980 aa15.34■□□□□ 0.05
SEMA4B-220ENST00000561321 ZKSCAN2Q63HK3 967 aa15.34■□□□□ 0.05
SEMA4B-220ENST00000561321 DEFB129Q9H1M3 183 aa15.34■□□□□ 0.05
SEMA4B-220ENST00000561321 CEP126Q9P2H0 1117 aa15.34■□□□□ 0.05
SEMA4B-220ENST00000561321 MYH13Q9UKX3 1938 aa15.34■□□□□ 0.05
SEMA4B-220ENST00000561321 IL15P40933 162 aaPredicted RBP15.33■□□□□ 0.04
SEMA4B-220ENST00000561321 KIF23Q02241 960 aaPredicted RBP15.33■□□□□ 0.04
SEMA4B-220ENST00000561321 ATP2B3Q16720 1220 aa15.33■□□□□ 0.04
SEMA4B-220ENST00000561321 RASAL3Q86YV0 1011 aa15.33■□□□□ 0.04
SEMA4B-220ENST00000561321 TMEM57Q8N5G2 664 aa15.33■□□□□ 0.04
SEMA4B-220ENST00000561321 TBC1D22AQ8WUA7 517 aa15.33■□□□□ 0.04
SEMA4B-220ENST00000561321 SERPINA10Q9UK55 444 aa15.33■□□□□ 0.04
SEMA4B-220ENST00000561321 FBXO3Q9UK99 471 aa15.33■□□□□ 0.04
SEMA4B-220ENST00000561321 FZD1Q9UP38 647 aa15.33■□□□□ 0.04
SEMA4B-220ENST00000561321 GNAI2P04899 355 aa15.32■□□□□ 0.04
SEMA4B-220ENST00000561321 CRKP46108 304 aa15.32■□□□□ 0.04
SEMA4B-220ENST00000561321 FTSJ3Q8IY81 847 aaKnown RBP15.32■□□□□ 0.04
SEMA4B-220ENST00000561321 TDRD3Q9H7E2 651 aaKnown RBP15.32■□□□□ 0.04
SEMA4B-220ENST00000561321 COPRSQ9NQ92 184 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms