RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 DOC2BQ14184 412 aa6.2□□□□□ -1.42
HERC1-211ENST00000560983 MAST1Q9Y2H9 1570 aa6.19□□□□□ -1.42
HERC1-211ENST00000560983 NHSL1Q5SYE7 1610 aa6.19□□□□□ -1.42
HERC1-211ENST00000560983 FAM229AH3BQW9 127 aa6.19□□□□□ -1.42
HERC1-211ENST00000560983 MAP3K6O95382 1288 aa6.19□□□□□ -1.42
HERC1-211ENST00000560983 R3HDM1Q15032 1099 aaKnown RBP6.19□□□□□ -1.42
HERC1-211ENST00000560983 HINFPQ9BQA5 517 aa6.19□□□□□ -1.42
HERC1-211ENST00000560983 UBE2OQ9C0C9 1292 aaKnown RBP6.19□□□□□ -1.42
HERC1-211ENST00000560983 DNAJB12Q9NXW2 375 aaKnown RBP6.19□□□□□ -1.42
HERC1-211ENST00000560983 UBR1Q8IWV7 1749 aa6.19□□□□□ -1.42
HERC1-211ENST00000560983 LILRB5O75023 590 aa6.18□□□□□ -1.42
HERC1-211ENST00000560983 APBA3O96018 575 aa6.18□□□□□ -1.42
HERC1-211ENST00000560983 TRIM28Q13263 835 aaKnown RBP6.18□□□□□ -1.42
HERC1-211ENST00000560983 C14orf37Q86TY3 774 aa6.18□□□□□ -1.42
HERC1-211ENST00000560983 Q8N3U1 123 aa6.18□□□□□ -1.42
HERC1-211ENST00000560983 NACC1Q96RE7 527 aa6.18□□□□□ -1.42
HERC1-211ENST00000560983 TPSG1Q9NRR2 321 aa6.18□□□□□ -1.42
HERC1-211ENST00000560983 TBX22Q9Y458 520 aa6.18□□□□□ -1.42
HERC1-211ENST00000560983 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.18□□□□□ -1.42
HERC1-211ENST00000560983 CDC42BPAQ5VT25 1732 aa6.18□□□□□ -1.42
HERC1-211ENST00000560983 ADGBQ8N7X0 1667 aa6.17□□□□□ -1.42
HERC1-211ENST00000560983 CAMSAP2Q08AD1 1489 aa6.17□□□□□ -1.42
HERC1-211ENST00000560983 A0A0A0MRY4 1105 aa6.17□□□□□ -1.42
HERC1-211ENST00000560983 LGR5O75473 907 aa6.17□□□□□ -1.42
HERC1-211ENST00000560983 SELPP16109 830 aa6.17□□□□□ -1.42
HERC1-211ENST00000560983 IDH3AP50213 366 aa6.17□□□□□ -1.42
HERC1-211ENST00000560983 AFF1P51825 1210 aaKnown RBP6.17□□□□□ -1.42
HERC1-211ENST00000560983 SF3B2Q13435 895 aaKnown RBP6.17□□□□□ -1.42
HERC1-211ENST00000560983 ADGRE1Q14246 886 aa6.17□□□□□ -1.42
HERC1-211ENST00000560983 GRIK5Q16478 980 aa6.17□□□□□ -1.42
HERC1-211ENST00000560983 KLK14Q9P0G3 267 aa6.17□□□□□ -1.42
HERC1-211ENST00000560983 FRRS1LQ9P0K9 344 aa6.17□□□□□ -1.42
HERC1-211ENST00000560983 ZFATQ9P243 1243 aa6.17□□□□□ -1.42
HERC1-211ENST00000560983 CCNB3Q8WWL7 1395 aa6.17□□□□□ -1.42
HERC1-211ENST00000560983 ZBTB42B2RXF5 422 aa6.16□□□□□ -1.42
HERC1-211ENST00000560983 EGFRP00533 1210 aa6.16□□□□□ -1.42
HERC1-211ENST00000560983 ELNP15502 786 aa6.16□□□□□ -1.42
HERC1-211ENST00000560983 EPB42P16452 691 aa6.16□□□□□ -1.42
HERC1-211ENST00000560983 NFKB1P19838 968 aa6.16□□□□□ -1.42
HERC1-211ENST00000560983 ARSDP51689 593 aa6.16□□□□□ -1.42
HERC1-211ENST00000560983 DGKZQ13574 1117 aa6.16□□□□□ -1.42
HERC1-211ENST00000560983 GRIK4Q16099 956 aa6.16□□□□□ -1.42
HERC1-211ENST00000560983 PSAPL1Q6NUJ1 521 aa6.16□□□□□ -1.42
HERC1-211ENST00000560983 TRPM4Q8TD43 1214 aa6.16□□□□□ -1.42
HERC1-211ENST00000560983 TTC9Q92623 222 aa6.16□□□□□ -1.42
HERC1-211ENST00000560983 IFT43Q96FT9 208 aa6.16□□□□□ -1.42
HERC1-211ENST00000560983 SEMA6BQ9H3T3 888 aa6.16□□□□□ -1.42
HERC1-211ENST00000560983 LRFN2Q9ULH4 789 aa6.16□□□□□ -1.42
HERC1-211ENST00000560983 KDM5AP29375 1690 aaKnown RBP6.16□□□□□ -1.42
HERC1-211ENST00000560983 CASKIN1Q8WXD9 1431 aa6.16□□□□□ -1.42
HERC1-211ENST00000560983 C9orf172C9J069 976 aa6.15□□□□□ -1.42
HERC1-211ENST00000560983 OPLAHO14841 1288 aa6.15□□□□□ -1.42
HERC1-211ENST00000560983 DYRK3O43781 588 aa6.15□□□□□ -1.42
HERC1-211ENST00000560983 MICAL2O94851 1124 aa6.15□□□□□ -1.42
HERC1-211ENST00000560983 SRPK2P78362 688 aaKnown RBP6.15□□□□□ -1.42
HERC1-211ENST00000560983 ELOAQ14241 798 aaKnown RBP6.15□□□□□ -1.42
HERC1-211ENST00000560983 MBTPS1Q14703 1052 aa6.15□□□□□ -1.42
HERC1-211ENST00000560983 C11orf91Q3C1V1 193 aa6.15□□□□□ -1.42
HERC1-211ENST00000560983 LENG1Q96BZ8 264 aaPredicted RBP6.15□□□□□ -1.42
HERC1-211ENST00000560983 LPIN3Q9BQK8 851 aa6.15□□□□□ -1.42
HERC1-211ENST00000560983 JPH1Q9HDC5 661 aaPredicted RBP6.15□□□□□ -1.42
HERC1-211ENST00000560983 ARHGAP31Q2M1Z3 1444 aa6.15□□□□□ -1.43
HERC1-211ENST00000560983 ASXL1Q8IXJ9 1541 aa6.15□□□□□ -1.43
HERC1-211ENST00000560983 MROH1Q8NDA8 1641 aa6.14□□□□□ -1.43
HERC1-211ENST00000560983 PPP1R15AO75807 674 aaPredicted RBP6.14□□□□□ -1.43
HERC1-211ENST00000560983 HOXD8P13378 290 aaPredicted RBP6.14□□□□□ -1.43
HERC1-211ENST00000560983 GPLD1P80108 840 aa6.14□□□□□ -1.43
HERC1-211ENST00000560983 PCSK7Q16549 785 aa6.14□□□□□ -1.43
HERC1-211ENST00000560983 TRAPPC3LQ5T215 181 aa6.14□□□□□ -1.43
HERC1-211ENST00000560983 FMR1NBQ8N0W7 255 aaPredicted RBP6.14□□□□□ -1.43
HERC1-211ENST00000560983 FAM200AQ8TCP9 573 aa6.14□□□□□ -1.43
HERC1-211ENST00000560983 SSBP4Q9BWG4 385 aaPredicted RBP6.14□□□□□ -1.43
HERC1-211ENST00000560983 MST1RQ04912 1400 aa6.14□□□□□ -1.43
HERC1-211ENST00000560983 PTCH1Q13635 1447 aa6.14□□□□□ -1.43
HERC1-211ENST00000560983 CCDC18Q5T9S5 1454 aa6.14□□□□□ -1.43
HERC1-211ENST00000560983 LRRIQ1Q96JM4 1722 aa6.13□□□□□ -1.43
HERC1-211ENST00000560983 FKBP5Q13451 457 aaPredicted RBP6.13□□□□□ -1.43
HERC1-211ENST00000560983 OCLNQ16625 522 aa6.13□□□□□ -1.43
HERC1-211ENST00000560983 SWI5Q1ZZU3 235 aa6.13□□□□□ -1.43
HERC1-211ENST00000560983 FOXD4L6Q3SYB3 417 aaPredicted RBP6.13□□□□□ -1.43
HERC1-211ENST00000560983 FOXD4L3Q6VB84 417 aaPredicted RBP6.13□□□□□ -1.43
HERC1-211ENST00000560983 DHX32Q7L7V1 743 aaKnown RBP6.13□□□□□ -1.43
HERC1-211ENST00000560983 DTWD1Q8N5C7 304 aa6.13□□□□□ -1.43
HERC1-211ENST00000560983 NUDT8Q8WV74 236 aa6.13□□□□□ -1.43
HERC1-211ENST00000560983 PNMA5Q96PV4 448 aa6.13□□□□□ -1.43
HERC1-211ENST00000560983 ZMIZ1Q9ULJ6 1067 aa6.13□□□□□ -1.43
HERC1-211ENST00000560983 AMOTL2Q9Y2J4 779 aa6.13□□□□□ -1.43
HERC1-211ENST00000560983 ACIN1Q9UKV3 1341 aaKnown RBP6.13□□□□□ -1.43
HERC1-211ENST00000560983 PLEKHG1Q9ULL1 1385 aa6.13□□□□□ -1.43
HERC1-211ENST00000560983 RGS9O75916 674 aaPredicted RBP6.12□□□□□ -1.43
HERC1-211ENST00000560983 H2AFB1P0C5Y9 115 aa6.12□□□□□ -1.43
HERC1-211ENST00000560983 H2AFB2P0C5Z0 115 aa6.12□□□□□ -1.43
HERC1-211ENST00000560983 TSPY4P0CV99 314 aa6.12□□□□□ -1.43
HERC1-211ENST00000560983 TSPY10P0CW01 314 aa6.12□□□□□ -1.43
HERC1-211ENST00000560983 NRLP54845 237 aa6.12□□□□□ -1.43
HERC1-211ENST00000560983 RAC1P63000 192 aa6.12□□□□□ -1.43
HERC1-211ENST00000560983 PLAURQ03405 335 aa6.12□□□□□ -1.43
HERC1-211ENST00000560983 MTUS2Q5JR59 1369 aa6.12□□□□□ -1.43
HERC1-211ENST00000560983 COX20Q5RI15 118 aa6.12□□□□□ -1.43
HERC1-211ENST00000560983 PERM1Q5SV97 790 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms