RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 TTC41PQ6P2S7 1318 aa11.5□□□□□ -0.57
HERC1-206ENST00000559996 FER1L6Q2WGJ9 1857 aa11.5□□□□□ -0.57
HERC1-206ENST00000559996 ARFGEF1Q9Y6D6 1849 aa11.49□□□□□ -0.57
HERC1-206ENST00000559996 CHD4Q14839 1912 aa11.49□□□□□ -0.57
HERC1-206ENST00000559996 UFL1O94874 794 aa11.49□□□□□ -0.57
HERC1-206ENST00000559996 YBX3P16989 372 aaKnown RBP eCLIP11.49□□□□□ -0.57
HERC1-206ENST00000559996 MCAMP43121 646 aa11.49□□□□□ -0.57
HERC1-206ENST00000559996 GRIPAP1Q4V328 841 aa11.49□□□□□ -0.57
HERC1-206ENST00000559996 CCDC93Q567U6 631 aa11.49□□□□□ -0.57
HERC1-206ENST00000559996 RTKN2Q8IZC4 609 aa11.49□□□□□ -0.57
HERC1-206ENST00000559996 TDRD7Q8NHU6 1098 aaKnown RBP11.49□□□□□ -0.57
HERC1-206ENST00000559996 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.49□□□□□ -0.57
HERC1-206ENST00000559996 NDUFB9Q9Y6M9 179 aa11.49□□□□□ -0.57
HERC1-206ENST00000559996 AOX1Q06278 1338 aa11.49□□□□□ -0.57
HERC1-206ENST00000559996 GOLGB1Q14789 3259 aaKnown RBP11.49□□□□□ -0.57
HERC1-206ENST00000559996 COL4A5P29400 1685 aa11.49□□□□□ -0.57
HERC1-206ENST00000559996 C6orf229H3BNL8 230 aa11.48□□□□□ -0.57
HERC1-206ENST00000559996 IL1R1P14778 569 aa11.48□□□□□ -0.57
HERC1-206ENST00000559996 HIBADHP31937 336 aaKnown RBP11.48□□□□□ -0.57
HERC1-206ENST00000559996 FKBP4Q02790 459 aaKnown RBP eCLIP11.48□□□□□ -0.57
HERC1-206ENST00000559996 TTC22Q5TAA0 569 aa11.48□□□□□ -0.57
HERC1-206ENST00000559996 PI16Q6UXB8 463 aa11.48□□□□□ -0.57
HERC1-206ENST00000559996 BOLA2Q9H3K6 86 aa11.48□□□□□ -0.57
HERC1-206ENST00000559996 CD209Q9NNX6 404 aa11.48□□□□□ -0.57
HERC1-206ENST00000559996 BMP2KQ9NSY1 1161 aaPredicted RBP11.48□□□□□ -0.57
HERC1-206ENST00000559996 HMG20BQ9P0W2 317 aa11.48□□□□□ -0.57
HERC1-206ENST00000559996 MED23Q9ULK4 1368 aa11.48□□□□□ -0.57
HERC1-206ENST00000559996 COL1A1P02452 1464 aaPredicted RBP11.47□□□□□ -0.57
HERC1-206ENST00000559996 RIMBP2O15034 1052 aa11.47□□□□□ -0.57
HERC1-206ENST00000559996 KIAA2012Q0VF49 1180 aa11.47□□□□□ -0.57
HERC1-206ENST00000559996 RASGRF1Q13972 1273 aa11.47□□□□□ -0.57
HERC1-206ENST00000559996 WASHC4Q2M389 1173 aa11.47□□□□□ -0.57
HERC1-206ENST00000559996 CCDC158Q5M9N0 1113 aa11.47□□□□□ -0.57
HERC1-206ENST00000559996 EDC3Q96F86 508 aaKnown RBP11.47□□□□□ -0.57
HERC1-206ENST00000559996 HAUS7Q99871 368 aa11.47□□□□□ -0.57
HERC1-206ENST00000559996 ANTXR1Q9H6X2 564 aa11.47□□□□□ -0.57
HERC1-206ENST00000559996 KCNQ5Q9NR82 932 aa11.47□□□□□ -0.57
HERC1-206ENST00000559996 ZBTB47Q9UFB7 747 aaPredicted RBP11.47□□□□□ -0.57
HERC1-206ENST00000559996 LTBP3Q9NS15 1303 aa11.46□□□□□ -0.57
HERC1-206ENST00000559996 YDJCA8MPS7 323 aa11.46□□□□□ -0.57
HERC1-206ENST00000559996 GLRX3O76003 335 aaKnown RBP11.46□□□□□ -0.57
HERC1-206ENST00000559996 CYP2E1P05181 493 aaPredicted RBP11.46□□□□□ -0.57
HERC1-206ENST00000559996 ZAP70P43403 619 aa11.46□□□□□ -0.57
HERC1-206ENST00000559996 KCNJ4P48050 445 aa11.46□□□□□ -0.57
HERC1-206ENST00000559996 AOC3Q16853 763 aa11.46□□□□□ -0.57
HERC1-206ENST00000559996 SOGA3Q5TF21 947 aa11.46□□□□□ -0.57
HERC1-206ENST00000559996 VPS33BQ9H267 617 aa11.46□□□□□ -0.57
HERC1-206ENST00000559996 IQSEC3Q9UPP2 1182 aaPredicted RBP11.46□□□□□ -0.57
HERC1-206ENST00000559996 MAP4K4O95819 1239 aaPredicted RBP11.45□□□□□ -0.58
HERC1-206ENST00000559996 UQCRFS1P1P0C7P4 283 aa11.45□□□□□ -0.58
HERC1-206ENST00000559996 SDSP20132 328 aa11.45□□□□□ -0.58
HERC1-206ENST00000559996 RASSF7Q02833 373 aa11.45□□□□□ -0.58
HERC1-206ENST00000559996 DOK7Q18PE1 504 aa11.45□□□□□ -0.58
HERC1-206ENST00000559996 CAVIN4Q5BKX8 364 aa11.45□□□□□ -0.58
HERC1-206ENST00000559996 TTC39AQ5SRH9 613 aa11.45□□□□□ -0.58
HERC1-206ENST00000559996 ZC3H12CQ9C0D7 883 aaKnown RBP11.45□□□□□ -0.58
HERC1-206ENST00000559996 COA1Q9GZY4 146 aa11.45□□□□□ -0.58
HERC1-206ENST00000559996 SNRKQ9NRH2 765 aa11.45□□□□□ -0.58
HERC1-206ENST00000559996 ZNF277Q9NRM2 450 aaPredicted RBP11.45□□□□□ -0.58
HERC1-206ENST00000559996 ZNF646O15015 1829 aaPredicted RBP11.44□□□□□ -0.58
HERC1-206ENST00000559996 ERC2O15083 957 aa11.44□□□□□ -0.58
HERC1-206ENST00000559996 CHGBP05060 677 aa11.44□□□□□ -0.58
HERC1-206ENST00000559996 POTEJP0CG39 1038 aa11.44□□□□□ -0.58
HERC1-206ENST00000559996 BMP2KLQ5H9B9 411 aa11.44□□□□□ -0.58
HERC1-206ENST00000559996 GORABQ5T7V8 394 aa11.44□□□□□ -0.58
HERC1-206ENST00000559996 SPATA5Q8NB90 893 aa11.44□□□□□ -0.58
HERC1-206ENST00000559996 SUPT20HQ8NEM7 779 aa11.44□□□□□ -0.58
HERC1-206ENST00000559996 EYA3Q99504 573 aa11.44□□□□□ -0.58
HERC1-206ENST00000559996 TMX4Q9H1E5 349 aaPredicted RBP11.44□□□□□ -0.58
HERC1-206ENST00000559996 DBNDD1Q9H9R9 158 aa11.44□□□□□ -0.58
HERC1-206ENST00000559996 PIH1D3Q9NQM4 214 aaKnown RBP11.44□□□□□ -0.58
HERC1-206ENST00000559996 SCN9AQ15858 1988 aa11.44□□□□□ -0.58
HERC1-206ENST00000559996 PDS5AQ29RF7 1337 aaKnown RBP11.43□□□□□ -0.58
HERC1-206ENST00000559996 FAM205AQ6ZU69 1335 aa11.43□□□□□ -0.58
HERC1-206ENST00000559996 SBF1O95248 1867 aa11.43□□□□□ -0.58
HERC1-206ENST00000559996 MYO5AQ9Y4I1 1855 aaKnown RBP11.43□□□□□ -0.58
HERC1-206ENST00000559996 SEMA3EO15041 775 aa11.43□□□□□ -0.58
HERC1-206ENST00000559996 IARSP41252 1262 aaKnown RBP11.43□□□□□ -0.58
HERC1-206ENST00000559996 GRIK5Q16478 980 aa11.43□□□□□ -0.58
HERC1-206ENST00000559996 TBC1D9Q6ZT07 1266 aa11.43□□□□□ -0.58
HERC1-206ENST00000559996 ZNF804AQ7Z570 1209 aa11.43□□□□□ -0.58
HERC1-206ENST00000559996 PODNQ7Z5L7 613 aa11.43□□□□□ -0.58
HERC1-206ENST00000559996 ZNF384Q8TF68 577 aa11.43□□□□□ -0.58
HERC1-206ENST00000559996 TAOK3Q9H2K8 898 aa11.43□□□□□ -0.58
HERC1-206ENST00000559996 PLSCR2Q9NRY7 297 aa11.43□□□□□ -0.58
HERC1-206ENST00000559996 PPIP5K2O43314 1243 aa11.42□□□□□ -0.58
HERC1-206ENST00000559996 ECE2O60344 883 aa11.42□□□□□ -0.58
HERC1-206ENST00000559996 SLFNL1Q499Z3 407 aa11.42□□□□□ -0.58
HERC1-206ENST00000559996 ARHGAP27Q6ZUM4 889 aa11.42□□□□□ -0.58
HERC1-206ENST00000559996 CERS5Q8N5B7 392 aa11.42□□□□□ -0.58
HERC1-206ENST00000559996 GPATCH3Q96I76 525 aa11.42□□□□□ -0.58
HERC1-206ENST00000559996 DNAJC2Q99543 621 aaKnown RBP11.42□□□□□ -0.58
HERC1-206ENST00000559996 PAG1Q9NWQ8 432 aa11.42□□□□□ -0.58
HERC1-206ENST00000559996 DENND2AQ9ULE3 1009 aa11.42□□□□□ -0.58
HERC1-206ENST00000559996 SALL1Q9NSC2 1324 aa11.41□□□□□ -0.58
HERC1-206ENST00000559996 CCDC88AQ3V6T2 1871 aa11.41□□□□□ -0.58
HERC1-206ENST00000559996 GOLIM4O00461 696 aa11.41□□□□□ -0.58
HERC1-206ENST00000559996 TIE1P35590 1138 aa11.41□□□□□ -0.58
HERC1-206ENST00000559996 VPS37DQ86XT2 251 aa11.41□□□□□ -0.58
HERC1-206ENST00000559996 KBTBD3Q8NAB2 608 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms