RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 IL6STP40189 918 aaPredicted RBP9.83□□□□□ -0.84
SPG11-209ENST00000558253 TOB2Q14106 344 aaPredicted RBP9.83□□□□□ -0.84
SPG11-209ENST00000558253 TTC39AQ5SRH9 613 aa9.83□□□□□ -0.84
SPG11-209ENST00000558253 ZNF589Q86UQ0 364 aaPredicted RBP9.83□□□□□ -0.84
SPG11-209ENST00000558253 GTF3C6Q969F1 213 aa9.83□□□□□ -0.84
SPG11-209ENST00000558253 ZNF274Q96GC6 653 aaPredicted RBP9.83□□□□□ -0.84
SPG11-209ENST00000558253 AGXT2Q9BYV1 514 aa9.83□□□□□ -0.84
SPG11-209ENST00000558253 CCDC39Q9UFE4 941 aa9.83□□□□□ -0.84
SPG11-209ENST00000558253 CFAP45Q9UL16 551 aa9.83□□□□□ -0.84
SPG11-209ENST00000558253 BCL9O00512 1426 aa9.82□□□□□ -0.84
SPG11-209ENST00000558253 KDM4FA0A1W2PPD8 638 aa9.82□□□□□ -0.84
SPG11-209ENST00000558253 GOLIM4O00461 696 aa9.82□□□□□ -0.84
SPG11-209ENST00000558253 RRP9O43818 475 aaKnown RBP9.82□□□□□ -0.84
SPG11-209ENST00000558253 PFKFB2O60825 505 aa9.82□□□□□ -0.84
SPG11-209ENST00000558253 UQCRFS1P1P0C7P4 283 aa9.82□□□□□ -0.84
SPG11-209ENST00000558253 PIP4K2AP48426 406 aaPredicted RBP9.82□□□□□ -0.84
SPG11-209ENST00000558253 EVCP57679 992 aa9.82□□□□□ -0.84
SPG11-209ENST00000558253 FGD1P98174 961 aa9.82□□□□□ -0.84
SPG11-209ENST00000558253 FOXD4L5Q5VV16 416 aaPredicted RBP9.82□□□□□ -0.84
SPG11-209ENST00000558253 NAA16Q6N069 864 aaPredicted RBP9.82□□□□□ -0.84
SPG11-209ENST00000558253 FOXD4L4Q8WXT5 416 aaPredicted RBP9.82□□□□□ -0.84
SPG11-209ENST00000558253 ARXQ96QS3 562 aa9.82□□□□□ -0.84
SPG11-209ENST00000558253 BTG4Q9NY30 223 aa9.82□□□□□ -0.84
SPG11-209ENST00000558253 VPS37CA5D8V6 355 aaPredicted RBP9.81□□□□□ -0.84
SPG11-209ENST00000558253 GOLGA6L4A6NEF3 574 aa9.81□□□□□ -0.84
SPG11-209ENST00000558253 PDE8AO60658 829 aa9.81□□□□□ -0.84
SPG11-209ENST00000558253 TPM3P06753 285 aa9.81□□□□□ -0.84
SPG11-209ENST00000558253 CYP21A2P08686 494 aa9.81□□□□□ -0.84
SPG11-209ENST00000558253 CYP19A1P11511 503 aaPredicted RBP9.81□□□□□ -0.84
SPG11-209ENST00000558253 CPA1P15085 419 aa9.81□□□□□ -0.84
SPG11-209ENST00000558253 MSNP26038 577 aaKnown RBP9.81□□□□□ -0.84
SPG11-209ENST00000558253 TIMM10P62072 90 aa9.81□□□□□ -0.84
SPG11-209ENST00000558253 EXOSC10Q01780 885 aaKnown RBP9.81□□□□□ -0.84
SPG11-209ENST00000558253 IMMTQ16891 758 aaKnown RBP9.81□□□□□ -0.84
SPG11-209ENST00000558253 DDX46Q7L014 1031 aaKnown RBP9.81□□□□□ -0.84
SPG11-209ENST00000558253 NLRP10Q86W26 655 aa9.81□□□□□ -0.84
SPG11-209ENST00000558253 DNAJC10Q8IXB1 793 aa9.81□□□□□ -0.84
SPG11-209ENST00000558253 SMARCC2Q8TAQ2 1214 aa9.81□□□□□ -0.84
SPG11-209ENST00000558253 APPBP2Q92624 585 aa9.81□□□□□ -0.84
SPG11-209ENST00000558253 JARID2Q92833 1246 aaPredicted RBP9.81□□□□□ -0.84
SPG11-209ENST00000558253 EMILIN3Q9NT22 766 aa9.81□□□□□ -0.84
SPG11-209ENST00000558253 RBM27Q9P2N5 1060 aaKnown RBP9.81□□□□□ -0.84
SPG11-209ENST00000558253 ASAP1Q9ULH1 1129 aa9.81□□□□□ -0.84
SPG11-209ENST00000558253 NOL7Q9UMY1 257 aaKnown RBP9.81□□□□□ -0.84
SPG11-209ENST00000558253 CNPY2Q9Y2B0 182 aa9.81□□□□□ -0.84
SPG11-209ENST00000558253 RIPOR2Q9Y4F9 1068 aa9.81□□□□□ -0.84
SPG11-209ENST00000558253 MROH5Q6ZUA9 1318 aa9.81□□□□□ -0.84
SPG11-209ENST00000558253 SHANK3Q9BYB0 1731 aa9.8□□□□□ -0.84
SPG11-209ENST00000558253 LARGE1O95461 756 aa9.8□□□□□ -0.84
SPG11-209ENST00000558253 HSPD1P10809 573 aaKnown RBP9.8□□□□□ -0.84
SPG11-209ENST00000558253 TERF1P54274 439 aa9.8□□□□□ -0.84
SPG11-209ENST00000558253 CTSWP56202 376 aa9.8□□□□□ -0.84
SPG11-209ENST00000558253 E2F4Q16254 413 aa9.8□□□□□ -0.84
SPG11-209ENST00000558253 LRRC24Q50LG9 513 aa9.8□□□□□ -0.84
SPG11-209ENST00000558253 PARP10Q53GL7 1025 aa9.8□□□□□ -0.84
SPG11-209ENST00000558253 Q6ZUG5 572 aa9.8□□□□□ -0.84
SPG11-209ENST00000558253 NECAB1Q8N987 351 aa9.8□□□□□ -0.84
SPG11-209ENST00000558253 KHSRPQ92945 711 aaKnown RBP eCLIP9.8□□□□□ -0.849e-6■■■□□ 17.9
SPG11-209ENST00000558253 XAGE2Q96GT9 111 aa9.8□□□□□ -0.84
SPG11-209ENST00000558253 RRAGDQ9NQL2 400 aaPredicted RBP9.8□□□□□ -0.84
SPG11-209ENST00000558253 DDX19AQ9NUU7 478 aaKnown RBP9.8□□□□□ -0.84
SPG11-209ENST00000558253 COL22A1Q8NFW1 1626 aaPredicted RBP9.8□□□□□ -0.84
SPG11-209ENST00000558253 AHDC1Q5TGY3 1603 aaPredicted RBP9.79□□□□□ -0.84
SPG11-209ENST00000558253 H3BQV1 296 aa9.79□□□□□ -0.84
SPG11-209ENST00000558253 GADD45BO75293 160 aaPredicted RBP9.79□□□□□ -0.84
SPG11-209ENST00000558253 CCDC192P0DO97 292 aa9.79□□□□□ -0.84
SPG11-209ENST00000558253 DNM1Q05193 864 aaKnown RBP9.79□□□□□ -0.84
SPG11-209ENST00000558253 ST3GAL1Q11201 340 aa9.79□□□□□ -0.84
SPG11-209ENST00000558253 UBE3CQ15386 1083 aa9.79□□□□□ -0.84
SPG11-209ENST00000558253 ATP2B3Q16720 1220 aa9.79□□□□□ -0.84
SPG11-209ENST00000558253 METTL24Q5JXM2 366 aa9.79□□□□□ -0.84
SPG11-209ENST00000558253 IFFO2Q5TF58 517 aa9.79□□□□□ -0.84
SPG11-209ENST00000558253 LDHAL6AQ6ZMR3 332 aa9.79□□□□□ -0.84
SPG11-209ENST00000558253 TTLL11Q8NHH1 800 aa9.79□□□□□ -0.84
SPG11-209ENST00000558253 SMARCC1Q92922 1105 aaPredicted RBP9.79□□□□□ -0.84
SPG11-209ENST00000558253 EDC3Q96F86 508 aaKnown RBP9.79□□□□□ -0.84
SPG11-209ENST00000558253 ZNF396Q96N95 335 aaPredicted RBP9.79□□□□□ -0.84
SPG11-209ENST00000558253 PLCH1Q4KWH8 1693 aa9.79□□□□□ -0.84
SPG11-209ENST00000558253 MAST3O60307 1309 aa9.79□□□□□ -0.84
SPG11-209ENST00000558253 TJP1Q07157 1748 aa9.79□□□□□ -0.84
SPG11-209ENST00000558253 RTL9Q8NET4 1388 aa9.78□□□□□ -0.84
SPG11-209ENST00000558253 E7EWF7 191 aa9.78□□□□□ -0.84
SPG11-209ENST00000558253 IRS4O14654 1257 aaPredicted RBP9.78□□□□□ -0.84
SPG11-209ENST00000558253 CTAGE5O15320 804 aa9.78□□□□□ -0.84
SPG11-209ENST00000558253 FIBPO43427 364 aa9.78□□□□□ -0.84
SPG11-209ENST00000558253 ZNF500O60304 480 aaPredicted RBP9.78□□□□□ -0.84
SPG11-209ENST00000558253 PDE8BO95263 885 aa9.78□□□□□ -0.84
SPG11-209ENST00000558253 FKBP4Q02790 459 aaKnown RBP eCLIP9.78□□□□□ -0.84
SPG11-209ENST00000558253 ALX1Q15699 326 aa9.78□□□□□ -0.84
SPG11-209ENST00000558253 ZNF34Q8IZ26 560 aa9.78□□□□□ -0.84
SPG11-209ENST00000558253 UPF1Q92900 1129 aaKnown RBP eCLIP9.78□□□□□ -0.84
SPG11-209ENST00000558253 NSFL1CQ9UNZ2 370 aaKnown RBP9.78□□□□□ -0.84
SPG11-209ENST00000558253 TBC1D2BQ9UPU7 963 aa9.78□□□□□ -0.84
SPG11-209ENST00000558253 IGSF3O75054 1194 aa9.77□□□□□ -0.85
SPG11-209ENST00000558253 NUDT7P0C024 238 aa9.77□□□□□ -0.85
SPG11-209ENST00000558253 ITGA6P23229 1130 aa9.77□□□□□ -0.85
SPG11-209ENST00000558253 ARID4AP29374 1257 aaPredicted RBP9.77□□□□□ -0.85
SPG11-209ENST00000558253 EIF5P55010 431 aaKnown RBP9.77□□□□□ -0.85
SPG11-209ENST00000558253 PUM3Q15397 648 aaKnown RBP9.77□□□□□ -0.85
SPG11-209ENST00000558253 MAP3K11Q16584 847 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms