RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 HIBADHP31937 336 aaKnown RBP17.5■□□□□ 0.39
SLIRP-207ENST00000556831 IL15P40933 162 aaPredicted RBP17.5■□□□□ 0.39
SLIRP-207ENST00000556831 KIF4BQ2VIQ3 1234 aa17.5■□□□□ 0.39
SLIRP-207ENST00000556831 ZC3H15Q8WU90 426 aaKnown RBP17.5■□□□□ 0.39
SLIRP-207ENST00000556831 CEP126Q9P2H0 1117 aa17.5■□□□□ 0.39
SLIRP-207ENST00000556831 HDAC9Q9UKV0 1011 aa17.5■□□□□ 0.39
SLIRP-207ENST00000556831 SCAF8Q9UPN6 1271 aaKnown RBP17.5■□□□□ 0.39
SLIRP-207ENST00000556831 HSPA8P11142 646 aaKnown RBP17.49■□□□□ 0.39
SLIRP-207ENST00000556831 CERS5Q8N5B7 392 aa17.49■□□□□ 0.39
SLIRP-207ENST00000556831 VGLL2Q8N8G2 317 aa17.49■□□□□ 0.39
SLIRP-207ENST00000556831 CHMP4BQ9H444 224 aaKnown RBP17.49■□□□□ 0.39
SLIRP-207ENST00000556831 PA2G4Q9UQ80 394 aaKnown RBP17.49■□□□□ 0.39
SLIRP-207ENST00000556831 IL1R1P14778 569 aa17.48■□□□□ 0.39
SLIRP-207ENST00000556831 GYG1P46976 350 aa17.48■□□□□ 0.39
SLIRP-207ENST00000556831 MMP14P50281 582 aa17.48■□□□□ 0.39
SLIRP-207ENST00000556831 MTX1Q13505 466 aa17.48■□□□□ 0.39
SLIRP-207ENST00000556831 DCPSQ96C86 337 aaKnown RBP17.48■□□□□ 0.39
SLIRP-207ENST00000556831 PGAP2Q9UHJ9 254 aa17.48■□□□□ 0.39
SLIRP-207ENST00000556831 PCDHAC2Q9Y5I4 1007 aa17.48■□□□□ 0.39
SLIRP-207ENST00000556831 TRPM7Q96QT4 1865 aa17.48■□□□□ 0.39
SLIRP-207ENST00000556831 ADM5C9JUS6 153 aa17.47■□□□□ 0.39
SLIRP-207ENST00000556831 ZNF280AP59817 542 aaPredicted RBP17.47■□□□□ 0.39
SLIRP-207ENST00000556831 ATP2B3Q16720 1220 aa17.47■□□□□ 0.39
SLIRP-207ENST00000556831 CST9Q5W186 159 aa17.47■□□□□ 0.39
SLIRP-207ENST00000556831 ATG9AQ7Z3C6 839 aa17.47■□□□□ 0.39
SLIRP-207ENST00000556831 PANK1Q8TE04 598 aa17.47■□□□□ 0.39
SLIRP-207ENST00000556831 LPIN2Q92539 896 aa17.47■□□□□ 0.39
SLIRP-207ENST00000556831 MYOZ2Q9NPC6 264 aa17.47■□□□□ 0.39
SLIRP-207ENST00000556831 COPRSQ9NQ92 184 aa17.47■□□□□ 0.39
SLIRP-207ENST00000556831 OS9Q13438 667 aaPredicted RBP17.46■□□□□ 0.39
SLIRP-207ENST00000556831 USP48Q86UV5 1035 aa17.46■□□□□ 0.39
SLIRP-207ENST00000556831 DDX19BQ9UMR2 479 aa17.46■□□□□ 0.39
SLIRP-207ENST00000556831 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.46■□□□□ 0.39
SLIRP-207ENST00000556831 AOX1Q06278 1338 aa17.46■□□□□ 0.38
SLIRP-207ENST00000556831 TMEM88BA6NKF7 163 aa17.45■□□□□ 0.38
SLIRP-207ENST00000556831 SASH1O94885 1247 aa17.45■□□□□ 0.38
SLIRP-207ENST00000556831 G3BP1Q13283 466 aaKnown RBP eCLIP17.45■□□□□ 0.38
SLIRP-207ENST00000556831 CDC37L1Q7L3B6 337 aa17.45■□□□□ 0.38
SLIRP-207ENST00000556831 KIAA0825Q8IV33 1275 aa17.45■□□□□ 0.38
SLIRP-207ENST00000556831 SULF1Q8IWU6 871 aa17.45■□□□□ 0.38
SLIRP-207ENST00000556831 GCC1Q96CN9 775 aa17.45■□□□□ 0.38
SLIRP-207ENST00000556831 FAM84BQ96KN1 310 aaPredicted RBP17.45■□□□□ 0.38
SLIRP-207ENST00000556831 C1orf115Q9H7X2 142 aa17.45■□□□□ 0.38
SLIRP-207ENST00000556831 GNL3LQ9NVN8 582 aaKnown RBP17.45■□□□□ 0.38
SLIRP-207ENST00000556831 IQSEC3Q9UPP2 1182 aaPredicted RBP17.45■□□□□ 0.38
SLIRP-207ENST00000556831 AKAP2Q9Y2D5 859 aa17.45■□□□□ 0.38
SLIRP-207ENST00000556831 MVPQ14764 893 aaKnown RBP17.44■□□□□ 0.38
SLIRP-207ENST00000556831 GRIK5Q16478 980 aa17.44■□□□□ 0.38
SLIRP-207ENST00000556831 NBPF9Q3BBW0 867 aa17.44■□□□□ 0.38
SLIRP-207ENST00000556831 GGA3Q9NZ52 723 aa17.44■□□□□ 0.38
SLIRP-207ENST00000556831 ZBTB7BO15156 539 aaPredicted RBP17.43■□□□□ 0.38
SLIRP-207ENST00000556831 FGFR2P21802 821 aa17.43■□□□□ 0.38
SLIRP-207ENST00000556831 FKBP1AP62942 108 aaKnown RBP17.43■□□□□ 0.38
SLIRP-207ENST00000556831 MAP2K1Q02750 393 aaPredicted RBP17.43■□□□□ 0.38
SLIRP-207ENST00000556831 CHAF1AQ13111 956 aaPredicted RBP17.43■□□□□ 0.38
SLIRP-207ENST00000556831 SCARF1Q14162 830 aa17.43■□□□□ 0.38
SLIRP-207ENST00000556831 MFSD14BQ5SR56 506 aa17.43■□□□□ 0.38
SLIRP-207ENST00000556831 KRT26Q7Z3Y9 468 aa17.43■□□□□ 0.38
SLIRP-207ENST00000556831 TDRD7Q8NHU6 1098 aaKnown RBP17.43■□□□□ 0.38
SLIRP-207ENST00000556831 TBC1D22AQ8WUA7 517 aa17.43■□□□□ 0.38
SLIRP-207ENST00000556831 ZNF408Q9H9D4 720 aa17.43■□□□□ 0.38
SLIRP-207ENST00000556831 ABT1Q9ULW3 272 aaKnown RBP17.43■□□□□ 0.38
SLIRP-207ENST00000556831 PNMA6EA0A0J9YXQ4 647 aa17.42■□□□□ 0.38
SLIRP-207ENST00000556831 F8W031 263 aaPredicted RBP17.42■□□□□ 0.38
SLIRP-207ENST00000556831 ANGEL2Q5VTE6 544 aaKnown RBP17.42■□□□□ 0.38
SLIRP-207ENST00000556831 COG6Q9Y2V7 657 aa17.42■□□□□ 0.38
SLIRP-207ENST00000556831 COL1A1P02452 1464 aaPredicted RBP17.42■□□□□ 0.38
SLIRP-207ENST00000556831 FAM205AQ6ZU69 1335 aa17.42■□□□□ 0.38
SLIRP-207ENST00000556831 ARAP2Q8WZ64 1704 aa17.41■□□□□ 0.38
SLIRP-207ENST00000556831 MYH13Q9UKX3 1938 aa17.41■□□□□ 0.38
SLIRP-207ENST00000556831 MYO1BO43795 1136 aa17.41■□□□□ 0.38
SLIRP-207ENST00000556831 CELF2O95319 508 aaKnown RBP17.41■□□□□ 0.38
SLIRP-207ENST00000556831 BCAMP50895 628 aa17.41■□□□□ 0.38
SLIRP-207ENST00000556831 RBM5P52756 815 aaKnown RBP eCLIP17.41■□□□□ 0.38
SLIRP-207ENST00000556831 DLGAP5Q15398 846 aa17.41■□□□□ 0.38
SLIRP-207ENST00000556831 GORABQ5T7V8 394 aa17.41■□□□□ 0.38
SLIRP-207ENST00000556831 FBXO33Q7Z6M2 555 aa17.41■□□□□ 0.38
SLIRP-207ENST00000556831 VEGFBP49765 207 aa17.4■□□□□ 0.38
SLIRP-207ENST00000556831 ATP8B2P98198 1209 aa17.4■□□□□ 0.38
SLIRP-207ENST00000556831 TFCP2Q12800 502 aa17.4■□□□□ 0.38
SLIRP-207ENST00000556831 PDE3AQ14432 1141 aa17.4■□□□□ 0.38
SLIRP-207ENST00000556831 WNT10BO00744 389 aa17.39■□□□□ 0.37
SLIRP-207ENST00000556831 HMMRO75330 724 aa17.39■□□□□ 0.37
SLIRP-207ENST00000556831 SURF6O75683 361 aaKnown RBP17.39■□□□□ 0.37
SLIRP-207ENST00000556831 CENPBP07199 599 aaPredicted RBP17.39■□□□□ 0.37
SLIRP-207ENST00000556831 PRAMEF18Q5VWM3 479 aa17.39■□□□□ 0.37
SLIRP-207ENST00000556831 PAXIP1Q6ZW49 1069 aaPredicted RBP17.39■□□□□ 0.37
SLIRP-207ENST00000556831 ZBED3Q96IU2 234 aaPredicted RBP17.39■□□□□ 0.37
SLIRP-207ENST00000556831 NEUROD6Q96NK8 337 aa17.39■□□□□ 0.37
SLIRP-207ENST00000556831 TTF2Q9UNY4 1162 aaKnown RBP17.39■□□□□ 0.37
SLIRP-207ENST00000556831 MAST3O60307 1309 aa17.39■□□□□ 0.37
SLIRP-207ENST00000556831 PITPNM2Q9BZ72 1349 aa17.39■□□□□ 0.37
SLIRP-207ENST00000556831 A0A1B0GUL7 405 aa17.38■□□□□ 0.37
SLIRP-207ENST00000556831 RASSF10A6NK89 507 aa17.38■□□□□ 0.37
SLIRP-207ENST00000556831 ADORA1P30542 326 aa17.38■□□□□ 0.37
SLIRP-207ENST00000556831 WDR66Q8TBY9 1149 aa17.38■□□□□ 0.37
SLIRP-207ENST00000556831 SSH3Q8TE77 659 aa17.38■□□□□ 0.37
SLIRP-207ENST00000556831 SEMA3EO15041 775 aa17.37■□□□□ 0.37
SLIRP-207ENST00000556831 POLA2Q14181 598 aa17.37■□□□□ 0.37
SLIRP-207ENST00000556831 CYP4F22Q6NT55 531 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms