RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 DEFB129Q9H1M3 183 aa19.67■□□□□ 0.74
SUPT16H-205ENST00000556217 MKI67P46013 3256 aaKnown RBP19.66■□□□□ 0.74
SUPT16H-205ENST00000556217 A0A1B0GUL6 1792 aa19.66■□□□□ 0.74
SUPT16H-205ENST00000556217 PPP1R12BO60237 982 aaPredicted RBP19.66■□□□□ 0.74
SUPT16H-205ENST00000556217 INTS3Q68E01 1043 aaKnown RBP19.66■□□□□ 0.74
SUPT16H-205ENST00000556217 SLC10A4Q96EP9 437 aa19.66■□□□□ 0.74
SUPT16H-205ENST00000556217 KIAA0100Q14667 2235 aaKnown RBP19.66■□□□□ 0.74
SUPT16H-205ENST00000556217 MANSC4A6NHS7 340 aaPredicted RBP19.65■□□□□ 0.74
SUPT16H-205ENST00000556217 CHMP3Q9Y3E7 222 aa19.65■□□□□ 0.74
SUPT16H-205ENST00000556217 UNCXA6NJT0 531 aa19.64■□□□□ 0.73
SUPT16H-205ENST00000556217 TAF5LO75529 589 aa19.64■□□□□ 0.73
SUPT16H-205ENST00000556217 ZBTB48P10074 688 aaPredicted RBP19.64■□□□□ 0.73
SUPT16H-205ENST00000556217 FKBP1AP62942 108 aaKnown RBP19.64■□□□□ 0.73
SUPT16H-205ENST00000556217 MAP3K11Q16584 847 aa19.64■□□□□ 0.73
SUPT16H-205ENST00000556217 SUPT20HL1Q3ZLR7 823 aa19.64■□□□□ 0.73
SUPT16H-205ENST00000556217 FANCIQ9NVI1 1328 aa19.64■□□□□ 0.73
SUPT16H-205ENST00000556217 LAMB1P07942 1786 aa19.63■□□□□ 0.73
SUPT16H-205ENST00000556217 IRS2Q9Y4H2 1338 aa19.63■□□□□ 0.73
SUPT16H-205ENST00000556217 IL1R1P14778 569 aa19.63■□□□□ 0.73
SUPT16H-205ENST00000556217 FXR1P51114 621 aaKnown RBP eCLIP19.63■□□□□ 0.73
SUPT16H-205ENST00000556217 CERS5Q8N5B7 392 aa19.63■□□□□ 0.73
SUPT16H-205ENST00000556217 HELBQ8NG08 1087 aaPredicted RBP19.63■□□□□ 0.73
SUPT16H-205ENST00000556217 FOXO4P98177 505 aa19.62■□□□□ 0.73
SUPT16H-205ENST00000556217 CFAP100Q494V2 611 aa19.62■□□□□ 0.73
SUPT16H-205ENST00000556217 IFNL1Q8IU54 200 aa19.62■□□□□ 0.73
SUPT16H-205ENST00000556217 POTEFA5A3E0 1075 aa19.61■□□□□ 0.73
SUPT16H-205ENST00000556217 SPDYE2BA6NHP3 402 aa19.61■□□□□ 0.73
SUPT16H-205ENST00000556217 F8W031 263 aaPredicted RBP19.61■□□□□ 0.73
SUPT16H-205ENST00000556217 SNAP23O00161 211 aa19.61■□□□□ 0.73
SUPT16H-205ENST00000556217 VAMP4O75379 141 aa19.61■□□□□ 0.73
SUPT16H-205ENST00000556217 SPDYE6P0CI01 402 aa19.61■□□□□ 0.73
SUPT16H-205ENST00000556217 CCDC57Q2TAC2 916 aa19.61■□□□□ 0.73
SUPT16H-205ENST00000556217 CCDC184Q52MB2 194 aa19.61■□□□□ 0.73
SUPT16H-205ENST00000556217 TAF7LQ5H9L4 462 aa19.61■□□□□ 0.73
SUPT16H-205ENST00000556217 WNK4Q96J92 1243 aa19.61■□□□□ 0.73
SUPT16H-205ENST00000556217 R3HDMLQ9H3Y0 253 aa19.61■□□□□ 0.73
SUPT16H-205ENST00000556217 VEZTQ9HBM0 779 aa19.61■□□□□ 0.73
SUPT16H-205ENST00000556217 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.61■□□□□ 0.73
SUPT16H-205ENST00000556217 FZD1Q9UP38 647 aa19.61■□□□□ 0.73
SUPT16H-205ENST00000556217 CLRN2A0PK11 232 aa19.6■□□□□ 0.73
SUPT16H-205ENST00000556217 IREB2P48200 963 aaKnown RBP19.6■□□□□ 0.73
SUPT16H-205ENST00000556217 RBM5P52756 815 aaKnown RBP eCLIP19.6■□□□□ 0.73
SUPT16H-205ENST00000556217 OTUD7BQ6GQQ9 843 aa19.6■□□□□ 0.73
SUPT16H-205ENST00000556217 WDR63Q8IWG1 891 aa19.6■□□□□ 0.73
SUPT16H-205ENST00000556217 TRIM17Q9Y577 477 aa19.6■□□□□ 0.73
SUPT16H-205ENST00000556217 SSC5DA1L4H1 1573 aa19.6■□□□□ 0.73
SUPT16H-205ENST00000556217 BEND3Q5T5X7 828 aa19.59■□□□□ 0.73
SUPT16H-205ENST00000556217 LMBR1LQ6UX01 489 aa19.59■□□□□ 0.73
SUPT16H-205ENST00000556217 LDHAL6AQ6ZMR3 332 aa19.59■□□□□ 0.73
SUPT16H-205ENST00000556217 CLMNQ96JQ2 1002 aa19.59■□□□□ 0.73
SUPT16H-205ENST00000556217 PRMT6Q96LA8 375 aaPredicted RBP19.59■□□□□ 0.73
SUPT16H-205ENST00000556217 CNNM1Q9NRU3 951 aa19.59■□□□□ 0.73
SUPT16H-205ENST00000556217 F6X3S4 739 aa19.58■□□□□ 0.72
SUPT16H-205ENST00000556217 PLIN1O60240 522 aa19.58■□□□□ 0.72
SUPT16H-205ENST00000556217 EXOSC9Q06265 439 aaKnown RBP19.58■□□□□ 0.72
SUPT16H-205ENST00000556217 TNFAIP1Q13829 316 aa19.58■□□□□ 0.72
SUPT16H-205ENST00000556217 PCDHAC2Q9Y5I4 1007 aa19.58■□□□□ 0.72
SUPT16H-205ENST00000556217 HTTP42858 3142 aa19.58■□□□□ 0.72
SUPT16H-205ENST00000556217 GRM8O00222 908 aa19.57■□□□□ 0.72
SUPT16H-205ENST00000556217 NBPF12Q5TAG4 269 aaPredicted RBP19.57■□□□□ 0.72
SUPT16H-205ENST00000556217 OTOP1Q7RTM1 612 aa19.57■□□□□ 0.72
SUPT16H-205ENST00000556217 ANKRD13AQ8IZ07 590 aa19.57■□□□□ 0.72
SUPT16H-205ENST00000556217 C9orf78Q9NZ63 289 aaPredicted RBP19.57■□□□□ 0.72
SUPT16H-205ENST00000556217 JAG2Q9Y219 1238 aa19.57■□□□□ 0.72
SUPT16H-205ENST00000556217 CEP290O15078 2479 aa19.56■□□□□ 0.72
SUPT16H-205ENST00000556217 IGF2BP3O00425 579 aaKnown RBP eCLIP19.56■□□□□ 0.72
SUPT16H-205ENST00000556217 RASA3Q14644 834 aa19.56■□□□□ 0.72
SUPT16H-205ENST00000556217 ERO1AQ96HE7 468 aa19.56■□□□□ 0.72
SUPT16H-205ENST00000556217 FAM205AQ6ZU69 1335 aa19.55■□□□□ 0.72
SUPT16H-205ENST00000556217 USP2O75604 605 aaPredicted RBP19.55■□□□□ 0.72
SUPT16H-205ENST00000556217 ARAP2Q8WZ64 1704 aa19.55■□□□□ 0.72
SUPT16H-205ENST00000556217 ZNF594Q96JF6 807 aaPredicted RBP19.55■□□□□ 0.72
SUPT16H-205ENST00000556217 MRS2Q9HD23 443 aa19.55■□□□□ 0.72
SUPT16H-205ENST00000556217 SERPINA10Q9UK55 444 aa19.55■□□□□ 0.72
SUPT16H-205ENST00000556217 SALL2Q9Y467 1007 aaPredicted RBP19.55■□□□□ 0.72
SUPT16H-205ENST00000556217 CENPFP49454 3210 aa19.55■□□□□ 0.72
SUPT16H-205ENST00000556217 UBE4AQ14139 1066 aa19.54■□□□□ 0.72
SUPT16H-205ENST00000556217 EPHA10Q5JZY3 1008 aa19.54■□□□□ 0.72
SUPT16H-205ENST00000556217 MFSD14BQ5SR56 506 aa19.54■□□□□ 0.72
SUPT16H-205ENST00000556217 TTF2Q9UNY4 1162 aaKnown RBP19.54■□□□□ 0.72
SUPT16H-205ENST00000556217 TRIOBPQ9H2D6 2365 aa19.54■□□□□ 0.72
SUPT16H-205ENST00000556217 OTOFQ9HC10 1997 aa19.53■□□□□ 0.72
SUPT16H-205ENST00000556217 RBBP6Q7Z6E9 1792 aaKnown RBP19.53■□□□□ 0.72
SUPT16H-205ENST00000556217 ALDH1L1O75891 902 aa19.53■□□□□ 0.72
SUPT16H-205ENST00000556217 EN2P19622 333 aaPredicted RBP19.53■□□□□ 0.72
SUPT16H-205ENST00000556217 HIBADHP31937 336 aaKnown RBP19.53■□□□□ 0.72
SUPT16H-205ENST00000556217 SPDYE2Q495Y8 402 aa19.53■□□□□ 0.72
SUPT16H-205ENST00000556217 TDRD7Q8NHU6 1098 aaKnown RBP19.53■□□□□ 0.72
SUPT16H-205ENST00000556217 PTPN22Q9Y2R2 807 aa19.53■□□□□ 0.72
SUPT16H-205ENST00000556217 CRHR2Q13324 411 aa19.52■□□□□ 0.72
SUPT16H-205ENST00000556217 ARMC5Q96C12 935 aa19.52■□□□□ 0.72
SUPT16H-205ENST00000556217 ZNF70Q9UC06 446 aaPredicted RBP19.52■□□□□ 0.72
SUPT16H-205ENST00000556217 COLQQ9Y215 455 aaPredicted RBP19.52■□□□□ 0.72
SUPT16H-205ENST00000556217 AOX1Q06278 1338 aa19.51■□□□□ 0.71
SUPT16H-205ENST00000556217 TESPA1A2RU30 521 aaPredicted RBP19.51■□□□□ 0.71
SUPT16H-205ENST00000556217 GJA5P36382 358 aa19.51■□□□□ 0.71
SUPT16H-205ENST00000556217 GYG1P46976 350 aa19.51■□□□□ 0.71
SUPT16H-205ENST00000556217 TNNI2P48788 182 aa19.51■□□□□ 0.71
SUPT16H-205ENST00000556217 SLC4A10Q6U841 1118 aa19.51■□□□□ 0.71
SUPT16H-205ENST00000556217 TMEM106CQ9BVX2 250 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms