RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 FOSL1P15407 271 aa10.21□□□□□ -0.77
VRK1-203ENST00000555067 PCSK2P16519 638 aa10.21□□□□□ -0.77
VRK1-203ENST00000555067 CABP4P57796 275 aa10.21□□□□□ -0.77
VRK1-203ENST00000555067 FDX2Q6P4F2 183 aa10.21□□□□□ -0.77
VRK1-203ENST00000555067 SALL4Q9UJQ4 1053 aa10.21□□□□□ -0.77
VRK1-203ENST00000555067 FAM177BA6PVY3 158 aa10.2□□□□□ -0.78
VRK1-203ENST00000555067 NLRP12P59046 1061 aa10.2□□□□□ -0.78
VRK1-203ENST00000555067 SGO2Q562F6 1265 aa10.2□□□□□ -0.78
VRK1-203ENST00000555067 ZNF438Q7Z4V0 828 aa10.2□□□□□ -0.78
VRK1-203ENST00000555067 ELP3Q9H9T3 547 aa10.2□□□□□ -0.78
VRK1-203ENST00000555067 LEMD3Q9Y2U8 911 aa10.2□□□□□ -0.78
VRK1-203ENST00000555067 SSFA2P28290 1259 aa10.19□□□□□ -0.78
VRK1-203ENST00000555067 NOM1Q5C9Z4 860 aaKnown RBP10.19□□□□□ -0.78
VRK1-203ENST00000555067 ATCAYQ86WG3 371 aa10.19□□□□□ -0.78
VRK1-203ENST00000555067 POU5F2Q8N7G0 328 aa10.19□□□□□ -0.78
VRK1-203ENST00000555067 ATG3Q9NT62 314 aa10.19□□□□□ -0.78
VRK1-203ENST00000555067 TMEM63CQ9P1W3 806 aa10.19□□□□□ -0.78
VRK1-203ENST00000555067 ANGEL1Q9UNK9 670 aaKnown RBP10.19□□□□□ -0.78
VRK1-203ENST00000555067 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.19□□□□□ -0.78
VRK1-203ENST00000555067 GAS2O43903 313 aaKnown RBP10.18□□□□□ -0.78
VRK1-203ENST00000555067 GIMAP7Q8NHV1 300 aa10.18□□□□□ -0.78
VRK1-203ENST00000555067 EDEM1Q92611 657 aa10.18□□□□□ -0.78
VRK1-203ENST00000555067 CNTN3Q9P232 1028 aa10.18□□□□□ -0.78
VRK1-203ENST00000555067 KANSL3Q9P2N6 904 aa10.18□□□□□ -0.78
VRK1-203ENST00000555067 SOX13Q9UN79 622 aa10.18□□□□□ -0.78
VRK1-203ENST00000555067 MTMR7Q9Y216 660 aa10.18□□□□□ -0.78
VRK1-203ENST00000555067 ITGB5P18084 799 aa10.17□□□□□ -0.78
VRK1-203ENST00000555067 COL19A1Q14993 1142 aa10.17□□□□□ -0.78
VRK1-203ENST00000555067 ALKBH2Q6NS38 261 aa10.17□□□□□ -0.78
VRK1-203ENST00000555067 XKR5Q6UX68 686 aa10.17□□□□□ -0.78
VRK1-203ENST00000555067 VSIG10LQ86VR7 867 aa10.17□□□□□ -0.78
VRK1-203ENST00000555067 GTF3C2Q8WUA4 911 aaPredicted RBP10.17□□□□□ -0.78
VRK1-203ENST00000555067 TMPRSS13Q9BYE2 586 aa10.17□□□□□ -0.78
VRK1-203ENST00000555067 C1orf115Q9H7X2 142 aa10.17□□□□□ -0.78
VRK1-203ENST00000555067 SUGCTQ9HAC7 445 aa10.17□□□□□ -0.78
VRK1-203ENST00000555067 DZANK1Q9NVP4 752 aa10.17□□□□□ -0.78
VRK1-203ENST00000555067 TIAF1O95411 115 aa10.16□□□□□ -0.78
VRK1-203ENST00000555067 ACPPP15309 386 aa10.16□□□□□ -0.78
VRK1-203ENST00000555067 MPSTP25325 297 aa10.16□□□□□ -0.78
VRK1-203ENST00000555067 MZF1P28698 734 aaPredicted RBP10.16□□□□□ -0.78
VRK1-203ENST00000555067 EIF1AXP47813 144 aaKnown RBP10.16□□□□□ -0.78
VRK1-203ENST00000555067 DNM1Q05193 864 aaKnown RBP10.16□□□□□ -0.78
VRK1-203ENST00000555067 HGSNATQ68CP4 663 aa10.16□□□□□ -0.78
VRK1-203ENST00000555067 SHISA5Q8N114 240 aa10.16□□□□□ -0.78
VRK1-203ENST00000555067 TTC16Q8NEE8 873 aa10.16□□□□□ -0.78
VRK1-203ENST00000555067 FBXL18Q96ME1 805 aa10.16□□□□□ -0.78
VRK1-203ENST00000555067 OSBPL1AQ9BXW6 950 aa10.16□□□□□ -0.78
VRK1-203ENST00000555067 PDGFAP04085 211 aa10.15□□□□□ -0.78
VRK1-203ENST00000555067 C8AP07357 584 aa10.15□□□□□ -0.78
VRK1-203ENST00000555067 C19orf57Q0VDD7 668 aa10.15□□□□□ -0.78
VRK1-203ENST00000555067 C14orf37Q86TY3 774 aa10.15□□□□□ -0.78
VRK1-203ENST00000555067 SMG8Q8ND04 991 aaKnown RBP10.15□□□□□ -0.78
VRK1-203ENST00000555067 ASIC4Q96FT7 647 aa10.15□□□□□ -0.78
VRK1-203ENST00000555067 FBXL6Q8N531 539 aa10.14□□□□□ -0.79
VRK1-203ENST00000555067 SLC7A3Q8WY07 619 aa10.14□□□□□ -0.79
VRK1-203ENST00000555067 PDE2AO00408 941 aaPredicted RBP10.13□□□□□ -0.79
VRK1-203ENST00000555067 HHIPQ96QV1 700 aa10.13□□□□□ -0.79
VRK1-203ENST00000555067 JUNBP17275 347 aaPredicted RBP10.12□□□□□ -0.79
VRK1-203ENST00000555067 NPR3P17342 541 aa10.12□□□□□ -0.79
VRK1-203ENST00000555067 CES1P23141 567 aa10.12□□□□□ -0.79
VRK1-203ENST00000555067 ARL4DP49703 201 aa10.12□□□□□ -0.79
VRK1-203ENST00000555067 C8orf34Q49A92 452 aa10.12□□□□□ -0.79
VRK1-203ENST00000555067 PMEPA1Q969W9 287 aa10.12□□□□□ -0.79
VRK1-203ENST00000555067 METTL22Q9BUU2 404 aaPredicted RBP10.12□□□□□ -0.79
VRK1-203ENST00000555067 FAM95CA0A1B0GW59 222 aa10.11□□□□□ -0.79
VRK1-203ENST00000555067 SOX1O00570 391 aaPredicted RBP10.11□□□□□ -0.79
VRK1-203ENST00000555067 TRPA1O75762 1119 aa10.11□□□□□ -0.79
VRK1-203ENST00000555067 FAM13AO94988 1023 aa10.11□□□□□ -0.79
VRK1-203ENST00000555067 RXRBP28702 533 aa10.11□□□□□ -0.79
VRK1-203ENST00000555067 SF3B2Q13435 895 aaKnown RBP10.11□□□□□ -0.79
VRK1-203ENST00000555067 NUTM2GQ5VZR2 741 aa10.11□□□□□ -0.79
VRK1-203ENST00000555067 C1orf127Q8N9H9 656 aa10.11□□□□□ -0.79
VRK1-203ENST00000555067 TMEM102Q8N9M5 508 aaPredicted RBP10.11□□□□□ -0.79
VRK1-203ENST00000555067 C12orf50Q8NA57 414 aaPredicted RBP10.11□□□□□ -0.79
VRK1-203ENST00000555067 GGNBP2Q9H3C7 697 aa10.11□□□□□ -0.79
VRK1-203ENST00000555067 TIMELESSQ9UNS1 1208 aa10.11□□□□□ -0.79
VRK1-203ENST00000555067 LOC100289279A0A1B0GTE1 492 aa10.1□□□□□ -0.79
VRK1-203ENST00000555067 CYP4F12Q9HCS2 524 aa10.1□□□□□ -0.79
VRK1-203ENST00000555067 DLGAP3O95886 979 aa10.09□□□□□ -0.79
VRK1-203ENST00000555067 USP5P45974 858 aa10.09□□□□□ -0.79
VRK1-203ENST00000555067 EHHADHQ08426 723 aa10.09□□□□□ -0.79
VRK1-203ENST00000555067 MTMR3Q13615 1198 aa10.09□□□□□ -0.79
VRK1-203ENST00000555067 CDPF1Q6NVV7 123 aa10.09□□□□□ -0.79
VRK1-203ENST00000555067 PAOXQ6QHF9 649 aa10.09□□□□□ -0.79
VRK1-203ENST00000555067 VN1R5Q7Z5H4 357 aa10.09□□□□□ -0.79
VRK1-203ENST00000555067 TP53INP2Q8IXH6 220 aa10.09□□□□□ -0.79
VRK1-203ENST00000555067 BSDC1Q9NW68 430 aaPredicted RBP10.09□□□□□ -0.79
VRK1-203ENST00000555067 POLIQ9UNA4 740 aa10.09□□□□□ -0.79
VRK1-203ENST00000555067 USTQ9Y2C2 406 aa10.09□□□□□ -0.79
VRK1-203ENST00000555067 A6NHS1 94 aa10.08□□□□□ -0.8
VRK1-203ENST00000555067 ADMP35318 185 aa10.08□□□□□ -0.8
VRK1-203ENST00000555067 AAMPQ13685 434 aa10.08□□□□□ -0.8
VRK1-203ENST00000555067 NFKBIBQ15653 356 aa10.08□□□□□ -0.8
VRK1-203ENST00000555067 B4GALNT3Q6L9W6 998 aa10.08□□□□□ -0.8
VRK1-203ENST00000555067 EZH1Q92800 747 aaPredicted RBP10.08□□□□□ -0.8
VRK1-203ENST00000555067 GATA6Q92908 595 aa10.08□□□□□ -0.8
VRK1-203ENST00000555067 SOX17Q9H6I2 414 aaPredicted RBP10.08□□□□□ -0.8
VRK1-203ENST00000555067 CYP26A1O43174 497 aa10.07□□□□□ -0.8
VRK1-203ENST00000555067 PHLDB3Q6NSJ2 640 aa10.07□□□□□ -0.8
VRK1-203ENST00000555067 ZAR1Q86SH2 424 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms