RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 MRPL18Q9H0U6 180 aaKnown RBP2.79□□□□□ -1.96
PRPF39-208ENST00000554785 KIAA1324LA8MWY0 1029 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-208ENST00000554785 GLB1P16278 677 aa2.78□□□□□ -1.96
PRPF39-208ENST00000554785 FSTP19883 344 aa2.78□□□□□ -1.96
PRPF39-208ENST00000554785 CD97P48960 835 aa2.78□□□□□ -1.96
PRPF39-208ENST00000554785 AAMPQ13685 434 aa2.78□□□□□ -1.96
PRPF39-208ENST00000554785 Q6ZS46 218 aa2.78□□□□□ -1.96
PRPF39-208ENST00000554785 GJD3Q8N144 294 aa2.78□□□□□ -1.96
PRPF39-208ENST00000554785 TRAIPQ9BWF2 469 aa2.78□□□□□ -1.96
PRPF39-208ENST00000554785 ADAM19Q9H013 955 aa2.78□□□□□ -1.96
PRPF39-208ENST00000554785 METTL12A8MUP2 240 aa2.78□□□□□ -1.96
PRPF39-208ENST00000554785 PDE2AO00408 941 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-208ENST00000554785 POLR3DP05423 398 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-208ENST00000554785 ARHGAP4P98171 946 aa2.78□□□□□ -1.96
PRPF39-208ENST00000554785 USPL1Q5W0Q7 1092 aa2.78□□□□□ -1.96
PRPF39-208ENST00000554785 VN1R5Q7Z5H4 357 aa2.78□□□□□ -1.96
PRPF39-208ENST00000554785 ARMC10Q8N2F6 343 aa2.78□□□□□ -1.96
PRPF39-208ENST00000554785 NXPE3Q969Y0 559 aa2.78□□□□□ -1.96
PRPF39-208ENST00000554785 OSMRQ99650 979 aa2.78□□□□□ -1.96
PRPF39-208ENST00000554785 MUC3BQ9H195 1237 aa2.78□□□□□ -1.96
PRPF39-208ENST00000554785 SOX1O00570 391 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-208ENST00000554785 ICMTO60725 284 aa2.77□□□□□ -1.97
PRPF39-208ENST00000554785 FAM13AO94988 1023 aa2.77□□□□□ -1.97
PRPF39-208ENST00000554785 DLGAP3O95886 979 aa2.77□□□□□ -1.97
PRPF39-208ENST00000554785 PTPRAP18433 802 aa2.77□□□□□ -1.97
PRPF39-208ENST00000554785 NLRP12P59046 1061 aa2.77□□□□□ -1.97
PRPF39-208ENST00000554785 SF3B2Q13435 895 aaKnown RBP2.77□□□□□ -1.97
PRPF39-208ENST00000554785 ACAD11Q709F0 780 aa2.77□□□□□ -1.97
PRPF39-208ENST00000554785 SLC7A3Q8WY07 619 aa2.77□□□□□ -1.97
PRPF39-208ENST00000554785 SOX13Q9UN79 622 aa2.77□□□□□ -1.97
PRPF39-208ENST00000554785 USTQ9Y2C2 406 aa2.77□□□□□ -1.97
PRPF39-208ENST00000554785 H3BRB1 525 aa2.77□□□□□ -1.97
PRPF39-208ENST00000554785 H3BRJ5 948 aa2.77□□□□□ -1.97
PRPF39-208ENST00000554785 PHACTR2O75167 634 aa2.77□□□□□ -1.97
PRPF39-208ENST00000554785 RPLP1P05386 114 aaKnown RBP2.77□□□□□ -1.97
PRPF39-208ENST00000554785 PCSK2P16519 638 aa2.77□□□□□ -1.97
PRPF39-208ENST00000554785 TAL1P17542 331 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-208ENST00000554785 DUOXA2Q1HG44 320 aa2.77□□□□□ -1.97
PRPF39-208ENST00000554785 UVSSAQ2YD98 709 aa2.77□□□□□ -1.97
PRPF39-208ENST00000554785 ALKBH2Q6NS38 261 aa2.77□□□□□ -1.97
PRPF39-208ENST00000554785 TMEM102Q8N9M5 508 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-208ENST00000554785 TUT1Q9H6E5 874 aaKnown RBP2.77□□□□□ -1.97
PRPF39-208ENST00000554785 ZFYVE28Q9HCC9 887 aa2.77□□□□□ -1.97
PRPF39-208ENST00000554785 SEC31BQ9NQW1 1179 aa2.77□□□□□ -1.97
PRPF39-208ENST00000554785 HMCN1Q96RW7 5635 aa2.76□□□□□ -1.97
PRPF39-208ENST00000554785 MED26O95402 600 aa2.76□□□□□ -1.97
PRPF39-208ENST00000554785 IGLV1-40P01703 118 aa2.76□□□□□ -1.97
PRPF39-208ENST00000554785 IGHA2P01877 340 aa2.76□□□□□ -1.97
PRPF39-208ENST00000554785 GP2P55259 537 aaKnown RBP2.76□□□□□ -1.97
PRPF39-208ENST00000554785 KLHL23Q8NBE8 558 aa2.76□□□□□ -1.97
PRPF39-208ENST00000554785 ASAP3Q8TDY4 903 aa2.76□□□□□ -1.97
PRPF39-208ENST00000554785 SNX29Q8TEQ0 813 aa2.76□□□□□ -1.97
PRPF39-208ENST00000554785 KRTAP9-3Q9BYQ3 159 aa2.76□□□□□ -1.97
PRPF39-208ENST00000554785 CEP41Q9BYV8 373 aa2.76□□□□□ -1.97
PRPF39-208ENST00000554785 RAXQ9Y2V3 346 aa2.76□□□□□ -1.97
PRPF39-208ENST00000554785 HMX2A2RU54 273 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 GRIA4P48058 902 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 PREPP48147 710 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 PIP4K2BP78356 416 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 ORC1Q13415 861 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 SPRED3Q2MJR0 410 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 TXNDC2Q86VQ3 553 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 TTC16Q8NEE8 873 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 BSNDQ8WZ55 320 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 PMEPA1Q969W9 287 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 FAM46AQ96IP4 442 aaKnown RBP2.75□□□□□ -1.97
PRPF39-208ENST00000554785 A0A1W2PP55 124 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 ZBTB7CA1YPR0 619 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 DHX15O43143 795 aaKnown RBP2.75□□□□□ -1.97
PRPF39-208ENST00000554785 ESRRAP11474 423 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-208ENST00000554785 EDN3P14138 238 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 USP5P45974 858 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 TRIM26Q12899 539 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-208ENST00000554785 ZNF423Q2M1K9 1284 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 FAM117BQ6P1L5 589 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 AEBP1Q8IUX7 1158 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 GLYCTKQ8IVS8 523 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 TRIM42Q8IWZ5 723 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 TCF12Q99081 682 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 BHLHE41Q9C0J9 482 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-208ENST00000554785 AMOTL2Q9Y2J4 779 aa2.75□□□□□ -1.97
PRPF39-208ENST00000554785 LOC100289279A0A1B0GTE1 492 aa2.74□□□□□ -1.97
PRPF39-208ENST00000554785 GPR182O15218 404 aa2.74□□□□□ -1.97
PRPF39-208ENST00000554785 BRD1O95696 1058 aa2.74□□□□□ -1.97
PRPF39-208ENST00000554785 WNT11O96014 354 aa2.74□□□□□ -1.97
PRPF39-208ENST00000554785 TGFB1P01137 390 aa2.74□□□□□ -1.97
PRPF39-208ENST00000554785 CTSBP07858 339 aa2.74□□□□□ -1.97
PRPF39-208ENST00000554785 DRD2P14416 443 aa2.74□□□□□ -1.97
PRPF39-208ENST00000554785 SSTR4P31391 388 aa2.74□□□□□ -1.97
PRPF39-208ENST00000554785 EHHADHQ08426 723 aa2.74□□□□□ -1.97
PRPF39-208ENST00000554785 C19orf57Q0VDD7 668 aa2.74□□□□□ -1.97
PRPF39-208ENST00000554785 IKBKEQ14164 716 aa2.74□□□□□ -1.97
PRPF39-208ENST00000554785 SHISA5Q8N114 240 aa2.74□□□□□ -1.97
PRPF39-208ENST00000554785 GIMAP7Q8NHV1 300 aa2.74□□□□□ -1.97
PRPF39-208ENST00000554785 MYRFLQ96LU7 910 aa2.74□□□□□ -1.97
PRPF39-208ENST00000554785 NRSN2Q9GZP1 204 aa2.74□□□□□ -1.97
PRPF39-208ENST00000554785 C7orf69Q9H7B7 122 aa2.74□□□□□ -1.97
PRPF39-208ENST00000554785 STOML1Q9UBI4 398 aa2.74□□□□□ -1.97
PRPF39-208ENST00000554785 EGFL7Q9UHF1 273 aa2.74□□□□□ -1.97
PRPF39-208ENST00000554785 ECEL1O95672 775 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms