RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 GCKRQ14397 625 aa12.61□□□□□ -0.39
ACTN1-208ENST00000553370 CCDC27Q2M243 656 aa12.61□□□□□ -0.39
ACTN1-208ENST00000553370 RASAL3Q86YV0 1011 aa12.61□□□□□ -0.39
ACTN1-208ENST00000553370 WWC1Q8IX03 1113 aa12.61□□□□□ -0.39
ACTN1-208ENST00000553370 DNAAF4Q8WXU2 420 aa12.61□□□□□ -0.39
ACTN1-208ENST00000553370 LEMD3Q9Y2U8 911 aa12.61□□□□□ -0.39
ACTN1-208ENST00000553370 IL16Q14005 1332 aa12.61□□□□□ -0.39
ACTN1-208ENST00000553370 ANKRD18BA2A2Z9 1011 aa12.6□□□□□ -0.39
ACTN1-208ENST00000553370 ANP32CO43423 234 aa12.6□□□□□ -0.39
ACTN1-208ENST00000553370 NBPF9Q3BBW0 867 aa12.6□□□□□ -0.39
ACTN1-208ENST00000553370 STRIP1Q5VSL9 837 aa12.6□□□□□ -0.39
ACTN1-208ENST00000553370 G2E3Q7L622 706 aa12.6□□□□□ -0.39
ACTN1-208ENST00000553370 APOBEC3FQ8IUX4 373 aaKnown RBP12.6□□□□□ -0.39
ACTN1-208ENST00000553370 MXD3Q9BW11 206 aa12.6□□□□□ -0.39
ACTN1-208ENST00000553370 RNF186Q9NXI6 227 aa12.6□□□□□ -0.39
ACTN1-208ENST00000553370 AK9Q5TCS8 1911 aa12.6□□□□□ -0.39
ACTN1-208ENST00000553370 FANCIQ9NVI1 1328 aa12.6□□□□□ -0.39
ACTN1-208ENST00000553370 TNRC18O15417 2968 aaPredicted RBP12.6□□□□□ -0.39
ACTN1-208ENST00000553370 UBE2Q2LH0YL09 131 aa12.59□□□□□ -0.39
ACTN1-208ENST00000553370 GTF2IP78347 998 aa12.59□□□□□ -0.39
ACTN1-208ENST00000553370 MKRN3Q13064 507 aaKnown RBP12.59□□□□□ -0.39
ACTN1-208ENST00000553370 PRKG1Q13976 671 aa12.59□□□□□ -0.39
ACTN1-208ENST00000553370 DACT2Q5SW24 774 aa12.59□□□□□ -0.39
ACTN1-208ENST00000553370 PRAMEF18Q5VWM3 479 aa12.59□□□□□ -0.39
ACTN1-208ENST00000553370 TTLL5Q6EMB2 1281 aa12.59□□□□□ -0.39
ACTN1-208ENST00000553370 ARMC9Q7Z3E5 817 aa12.59□□□□□ -0.39
ACTN1-208ENST00000553370 KIAA0825Q8IV33 1275 aa12.59□□□□□ -0.39
ACTN1-208ENST00000553370 LINS1Q8NG48 757 aa12.59□□□□□ -0.39
ACTN1-208ENST00000553370 GMLQ99445 158 aa12.59□□□□□ -0.39
ACTN1-208ENST00000553370 ARAP2Q8WZ64 1704 aa12.59□□□□□ -0.39
ACTN1-208ENST00000553370 H7C1W4 665 aa12.58□□□□□ -0.4
ACTN1-208ENST00000553370 IFIT5Q13325 482 aaKnown RBP12.58□□□□□ -0.4
ACTN1-208ENST00000553370 MOB2Q70IA6 237 aa12.58□□□□□ -0.4
ACTN1-208ENST00000553370 ZNF804AQ7Z570 1209 aa12.58□□□□□ -0.4
ACTN1-208ENST00000553370 CSRNP1Q96S65 589 aa12.58□□□□□ -0.4
ACTN1-208ENST00000553370 WTIPA6NIX2 430 aaPredicted RBP12.57□□□□□ -0.4
ACTN1-208ENST00000553370 WNT10BO00744 389 aa12.57□□□□□ -0.4
ACTN1-208ENST00000553370 MYO1BO43795 1136 aa12.57□□□□□ -0.4
ACTN1-208ENST00000553370 MMP14P50281 582 aa12.57□□□□□ -0.4
ACTN1-208ENST00000553370 CHRNDQ07001 517 aa12.57□□□□□ -0.4
ACTN1-208ENST00000553370 SREBF2Q12772 1141 aa12.57□□□□□ -0.4
ACTN1-208ENST00000553370 DLGAP5Q15398 846 aa12.57□□□□□ -0.4
ACTN1-208ENST00000553370 CCDC184Q52MB2 194 aa12.57□□□□□ -0.4
ACTN1-208ENST00000553370 CTU1Q7Z7A3 348 aaKnown RBP12.57□□□□□ -0.4
ACTN1-208ENST00000553370 PLA2G12BQ9BX93 195 aa12.57□□□□□ -0.4
ACTN1-208ENST00000553370 F8W031 263 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-208ENST00000553370 PLIN1O60240 522 aa12.56□□□□□ -0.4
ACTN1-208ENST00000553370 KLRK1P26718 216 aa12.56□□□□□ -0.4
ACTN1-208ENST00000553370 RBM5P52756 815 aaKnown RBP eCLIP12.56□□□□□ -0.4
ACTN1-208ENST00000553370 SOX10P56693 466 aa12.56□□□□□ -0.4
ACTN1-208ENST00000553370 EXOSC9Q06265 439 aaKnown RBP12.56□□□□□ -0.4
ACTN1-208ENST00000553370 CCDC57Q2TAC2 916 aa12.56□□□□□ -0.4
ACTN1-208ENST00000553370 TXNRD3Q86VQ6 643 aa12.56□□□□□ -0.4
ACTN1-208ENST00000553370 CNNM1Q9NRU3 951 aa12.56□□□□□ -0.4
ACTN1-208ENST00000553370 C9orf78Q9NZ63 289 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-208ENST00000553370 COL1A1P02452 1464 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-208ENST00000553370 TAF5LO75529 589 aa12.55□□□□□ -0.4
ACTN1-208ENST00000553370 SLC4A10Q6U841 1118 aa12.55□□□□□ -0.4
ACTN1-208ENST00000553370 HELBQ8NG08 1087 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-208ENST00000553370 VEZTQ9HBM0 779 aa12.55□□□□□ -0.4
ACTN1-208ENST00000553370 ANGEL1Q9UNK9 670 aaKnown RBP12.55□□□□□ -0.4
ACTN1-208ENST00000553370 OTOFQ9HC10 1997 aa12.55□□□□□ -0.4
ACTN1-208ENST00000553370 F6X3S4 739 aa12.54□□□□□ -0.4
ACTN1-208ENST00000553370 TBC1D8O95759 1140 aa12.54□□□□□ -0.4
ACTN1-208ENST00000553370 WDR63Q8IWG1 891 aa12.54□□□□□ -0.4
ACTN1-208ENST00000553370 CD209Q9NNX6 404 aa12.54□□□□□ -0.4
ACTN1-208ENST00000553370 KIAA0100Q14667 2235 aaKnown RBP12.53□□□□□ -0.4
ACTN1-208ENST00000553370 PPP1R12BO60237 982 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-208ENST00000553370 CSF1RP07333 972 aa12.53□□□□□ -0.4
ACTN1-208ENST00000553370 RGS19P49795 217 aa12.53□□□□□ -0.4
ACTN1-208ENST00000553370 LMBR1LQ6UX01 489 aa12.53□□□□□ -0.4
ACTN1-208ENST00000553370 LDHAL6AQ6ZMR3 332 aa12.53□□□□□ -0.4
ACTN1-208ENST00000553370 ZNF467Q7Z7K2 595 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-208ENST00000553370 FAM9BQ8IZU0 186 aa12.53□□□□□ -0.4
ACTN1-208ENST00000553370 JAG2Q9Y219 1238 aa12.53□□□□□ -0.4
ACTN1-208ENST00000553370 LAMB1P07942 1786 aa12.53□□□□□ -0.4
ACTN1-208ENST00000553370 GRM8O00222 908 aa12.52□□□□□ -0.41
ACTN1-208ENST00000553370 CASP7P55210 303 aa12.52□□□□□ -0.41
ACTN1-208ENST00000553370 VPS37DQ86XT2 251 aa12.52□□□□□ -0.41
ACTN1-208ENST00000553370 DEFB129Q9H1M3 183 aa12.52□□□□□ -0.41
ACTN1-208ENST00000553370 CLRN2A0PK11 232 aa12.51□□□□□ -0.41
ACTN1-208ENST00000553370 SNAP23O00161 211 aa12.51□□□□□ -0.41
ACTN1-208ENST00000553370 VAMP4O75379 141 aa12.51□□□□□ -0.41
ACTN1-208ENST00000553370 FRAT2O75474 233 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-208ENST00000553370 IREB2P48200 963 aaKnown RBP12.51□□□□□ -0.41
ACTN1-208ENST00000553370 PTPN12Q05209 780 aaKnown RBP12.51□□□□□ -0.41
ACTN1-208ENST00000553370 PKN2Q16513 984 aaKnown RBP12.51□□□□□ -0.41
ACTN1-208ENST00000553370 CFAP100Q494V2 611 aa12.51□□□□□ -0.41
ACTN1-208ENST00000553370 ZNF296Q8WUU4 475 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-208ENST00000553370 SLC10A4Q96EP9 437 aa12.51□□□□□ -0.41
ACTN1-208ENST00000553370 SRCIN1Q9C0H9 1055 aa12.51□□□□□ -0.41
ACTN1-208ENST00000553370 PPP2R3BQ9Y5P8 575 aa12.51□□□□□ -0.41
ACTN1-208ENST00000553370 ALDH1A1P00352 501 aa12.5□□□□□ -0.41
ACTN1-208ENST00000553370 ZEB1P37275 1124 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-208ENST00000553370 FXR2P51116 673 aaKnown RBP eCLIP12.5□□□□□ -0.41
ACTN1-208ENST00000553370 TNFAIP1Q13829 316 aa12.5□□□□□ -0.41
ACTN1-208ENST00000553370 SUPT20HL1Q3ZLR7 823 aa12.5□□□□□ -0.41
ACTN1-208ENST00000553370 BEND3Q5T5X7 828 aa12.5□□□□□ -0.41
ACTN1-208ENST00000553370 ZNF594Q96JF6 807 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-208ENST00000553370 HPS5Q9UPZ3 1129 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms