RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 RIPOR2Q9Y4F9 1068 aa17.56■□□□□ 0.4
DDX54-210ENST00000552375 FKBP1AP62942 108 aaKnown RBP17.55■□□□□ 0.4
DDX54-210ENST00000552375 NOGQ13253 232 aa17.55■□□□□ 0.4
DDX54-210ENST00000552375 ZBED3Q96IU2 234 aaPredicted RBP17.55■□□□□ 0.4
DDX54-210ENST00000552375 BEGAINQ9BUH8 593 aa17.55■□□□□ 0.4
DDX54-210ENST00000552375 LBX1P52954 281 aa17.54■□□□□ 0.4
DDX54-210ENST00000552375 FKBP1BP68106 108 aa17.54■□□□□ 0.4
DDX54-210ENST00000552375 RGMBQ6NW40 437 aa17.54■□□□□ 0.4
DDX54-210ENST00000552375 MYH13Q9UKX3 1938 aa17.54■□□□□ 0.4
DDX54-210ENST00000552375 PAPPA2Q9BXP8 1791 aa17.53■□□□□ 0.4
DDX54-210ENST00000552375 LRRC24Q50LG9 513 aa17.53■□□□□ 0.4
DDX54-210ENST00000552375 METTL24Q5JXM2 366 aa17.53■□□□□ 0.4
DDX54-210ENST00000552375 ATF7IPQ6VMQ6 1270 aa17.53■□□□□ 0.4
DDX54-210ENST00000552375 VGLL2Q8N8G2 317 aa17.53■□□□□ 0.4
DDX54-210ENST00000552375 MEIS3Q99687 375 aa17.53■□□□□ 0.4
DDX54-210ENST00000552375 FAM205AQ6ZU69 1335 aa17.52■□□□□ 0.4
DDX54-210ENST00000552375 COL1A1P02452 1464 aaPredicted RBP17.52■□□□□ 0.4
DDX54-210ENST00000552375 FAM155AB1AL88 458 aaPredicted RBP17.52■□□□□ 0.4
DDX54-210ENST00000552375 UBTFL1P0CB47 393 aaPredicted RBP17.52■□□□□ 0.4
DDX54-210ENST00000552375 HIBADHP31937 336 aaKnown RBP17.52■□□□□ 0.4
DDX54-210ENST00000552375 GYG1P46976 350 aa17.52■□□□□ 0.4
DDX54-210ENST00000552375 ZKSCAN2Q63HK3 967 aa17.52■□□□□ 0.4
DDX54-210ENST00000552375 APOBEC3FQ8IUX4 373 aaKnown RBP17.52■□□□□ 0.4
DDX54-210ENST00000552375 MTMR14Q8NCE2 650 aa17.52■□□□□ 0.4
DDX54-210ENST00000552375 TDRD7Q8NHU6 1098 aaKnown RBP17.52■□□□□ 0.4
DDX54-210ENST00000552375 KLHDC4Q8TBB5 520 aa17.52■□□□□ 0.4
DDX54-210ENST00000552375 SCAF8Q9UPN6 1271 aaKnown RBP17.52■□□□□ 0.4
DDX54-210ENST00000552375 JAG2Q9Y219 1238 aa17.52■□□□□ 0.4
DDX54-210ENST00000552375 IPO8O15397 1037 aaKnown RBP17.51■□□□□ 0.39
DDX54-210ENST00000552375 CA12O43570 354 aa17.51■□□□□ 0.39
DDX54-210ENST00000552375 RFX5P48382 616 aaPredicted RBP17.51■□□□□ 0.39
DDX54-210ENST00000552375 DLGAP5Q15398 846 aa17.51■□□□□ 0.39
DDX54-210ENST00000552375 ARHGAP45Q92619 1136 aa17.51■□□□□ 0.39
DDX54-210ENST00000552375 CCDC102AQ96A19 550 aa17.51■□□□□ 0.39
DDX54-210ENST00000552375 FAM84BQ96KN1 310 aaPredicted RBP17.51■□□□□ 0.39
DDX54-210ENST00000552375 LRRFIP2Q9Y608 721 aaKnown RBP17.51■□□□□ 0.39
DDX54-210ENST00000552375 F8W031 263 aaPredicted RBP17.5■□□□□ 0.39
DDX54-210ENST00000552375 PDE8BO95263 885 aa17.5■□□□□ 0.39
DDX54-210ENST00000552375 SLC10A3P09131 477 aa17.5■□□□□ 0.39
DDX54-210ENST00000552375 ZNF157P51786 506 aaPredicted RBP17.5■□□□□ 0.39
DDX54-210ENST00000552375 TMEM57Q8N5G2 664 aa17.5■□□□□ 0.39
DDX54-210ENST00000552375 ZIC5Q96T25 663 aa17.5■□□□□ 0.39
DDX54-210ENST00000552375 SPDYE2BA6NHP3 402 aa17.49■□□□□ 0.39
DDX54-210ENST00000552375 EYA2O00167 538 aa17.49■□□□□ 0.39
DDX54-210ENST00000552375 SPDYE6P0CI01 402 aa17.49■□□□□ 0.39
DDX54-210ENST00000552375 PUM3Q15397 648 aaKnown RBP17.49■□□□□ 0.39
DDX54-210ENST00000552375 CFAP100Q494V2 611 aa17.49■□□□□ 0.39
DDX54-210ENST00000552375 MFSD14BQ5SR56 506 aa17.49■□□□□ 0.39
DDX54-210ENST00000552375 INTS3Q68E01 1043 aaKnown RBP17.49■□□□□ 0.39
DDX54-210ENST00000552375 VPS37DQ86XT2 251 aa17.49■□□□□ 0.39
DDX54-210ENST00000552375 FTSJ3Q8IY81 847 aaKnown RBP17.49■□□□□ 0.39
DDX54-210ENST00000552375 POLR2AP24928 1970 aaKnown RBP17.48■□□□□ 0.39
DDX54-210ENST00000552375 ARAP2Q8WZ64 1704 aa17.48■□□□□ 0.39
DDX54-210ENST00000552375 NF2P35240 595 aa17.48■□□□□ 0.39
DDX54-210ENST00000552375 PTPN12Q05209 780 aaKnown RBP17.48■□□□□ 0.39
DDX54-210ENST00000552375 PRAMEF18Q5VWM3 479 aa17.48■□□□□ 0.39
DDX54-210ENST00000552375 FBXO33Q7Z6M2 555 aa17.48■□□□□ 0.39
DDX54-210ENST00000552375 RASAL3Q86YV0 1011 aa17.48■□□□□ 0.39
DDX54-210ENST00000552375 RLBP1P12271 317 aa17.47■□□□□ 0.39
DDX54-210ENST00000552375 FGFR2P21802 821 aa17.47■□□□□ 0.39
DDX54-210ENST00000552375 CAVIN4Q5BKX8 364 aa17.47■□□□□ 0.39
DDX54-210ENST00000552375 TSKSQ9UJT2 592 aa17.47■□□□□ 0.39
DDX54-210ENST00000552375 HDAC5Q9UQL6 1122 aa17.47■□□□□ 0.39
DDX54-210ENST00000552375 PCDHAC2Q9Y5I4 1007 aa17.47■□□□□ 0.39
DDX54-210ENST00000552375 MYO1BO43795 1136 aa17.46■□□□□ 0.39
DDX54-210ENST00000552375 IFIT1P09914 478 aaKnown RBP17.46■□□□□ 0.39
DDX54-210ENST00000552375 MOB2Q70IA6 237 aa17.46■□□□□ 0.39
DDX54-210ENST00000552375 ITPRIPQ8IWB1 547 aa17.46■□□□□ 0.39
DDX54-210ENST00000552375 DEFB129Q9H1M3 183 aa17.46■□□□□ 0.39
DDX54-210ENST00000552375 FBXO3Q9UK99 471 aa17.46■□□□□ 0.39
DDX54-210ENST00000552375 PPP2R3BQ9Y5P8 575 aa17.46■□□□□ 0.39
DDX54-210ENST00000552375 CLRN2A0PK11 232 aa17.45■□□□□ 0.38
DDX54-210ENST00000552375 CIAO1O76071 339 aa17.45■□□□□ 0.38
DDX54-210ENST00000552375 KIF23Q02241 960 aaPredicted RBP17.45■□□□□ 0.38
DDX54-210ENST00000552375 TTLL12Q14166 644 aaPredicted RBP17.45■□□□□ 0.38
DDX54-210ENST00000552375 ATG9AQ7Z3C6 839 aa17.45■□□□□ 0.38
DDX54-210ENST00000552375 DZIP1LQ8IYY4 767 aaKnown RBP17.45■□□□□ 0.38
DDX54-210ENST00000552375 PANK1Q8TE04 598 aa17.45■□□□□ 0.38
DDX54-210ENST00000552375 TBC1D22AQ8WUA7 517 aa17.45■□□□□ 0.38
DDX54-210ENST00000552375 SERPINA10Q9UK55 444 aa17.45■□□□□ 0.38
DDX54-210ENST00000552375 RCAN3Q9UKA8 241 aa17.45■□□□□ 0.38
DDX54-210ENST00000552375 TTF2Q9UNY4 1162 aaKnown RBP17.45■□□□□ 0.38
DDX54-210ENST00000552375 IQSEC3Q9UPP2 1182 aaPredicted RBP17.45■□□□□ 0.38
DDX54-210ENST00000552375 AOX1Q06278 1338 aa17.45■□□□□ 0.38
DDX54-210ENST00000552375 SSC5DA1L4H1 1573 aa17.45■□□□□ 0.38
DDX54-210ENST00000552375 UBE2Q2LH0YL09 131 aa17.44■□□□□ 0.38
DDX54-210ENST00000552375 SLC5A1P13866 664 aa17.44■□□□□ 0.38
DDX54-210ENST00000552375 BCAMP50895 628 aa17.44■□□□□ 0.38
DDX54-210ENST00000552375 CHAF1AQ13111 956 aaPredicted RBP17.44■□□□□ 0.38
DDX54-210ENST00000552375 LPIN2Q92539 896 aa17.44■□□□□ 0.38
DDX54-210ENST00000552375 PRMT6Q96LA8 375 aaPredicted RBP17.44■□□□□ 0.38
DDX54-210ENST00000552375 SIL1Q9H173 461 aa17.44■□□□□ 0.38
DDX54-210ENST00000552375 C1orf115Q9H7X2 142 aa17.44■□□□□ 0.38
DDX54-210ENST00000552375 VEZTQ9HBM0 779 aa17.44■□□□□ 0.38
DDX54-210ENST00000552375 SAGE1Q9NXZ1 904 aa17.44■□□□□ 0.38
DDX54-210ENST00000552375 FRAT2O75474 233 aaPredicted RBP17.43■□□□□ 0.38
DDX54-210ENST00000552375 CAPN15O75808 1086 aa17.43■□□□□ 0.38
DDX54-210ENST00000552375 GNAI3P08754 354 aa17.43■□□□□ 0.38
DDX54-210ENST00000552375 RBM5P52756 815 aaKnown RBP eCLIP17.43■□□□□ 0.38
DDX54-210ENST00000552375 SPDYE2Q495Y8 402 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms