RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 PTPN12Q05209 780 aaKnown RBP16.38■□□□□ 0.21
NPAS3-209ENST00000551008 ZNF804AQ7Z570 1209 aa16.38■□□□□ 0.21
NPAS3-209ENST00000551008 SULF1Q8IWU6 871 aa16.38■□□□□ 0.21
NPAS3-209ENST00000551008 MEIS3Q99687 375 aa16.38■□□□□ 0.21
NPAS3-209ENST00000551008 GBA2Q9HCG7 927 aaPredicted RBP16.38■□□□□ 0.21
NPAS3-209ENST00000551008 FAM205AQ6ZU69 1335 aa16.38■□□□□ 0.21
NPAS3-209ENST00000551008 MROH5Q6ZUA9 1318 aa16.38■□□□□ 0.21
NPAS3-209ENST00000551008 FAM155AB1AL88 458 aaPredicted RBP16.37■□□□□ 0.21
NPAS3-209ENST00000551008 BCAR3O75815 825 aa16.37■□□□□ 0.21
NPAS3-209ENST00000551008 FGFR2P21802 821 aa16.37■□□□□ 0.21
NPAS3-209ENST00000551008 HUNKP57058 714 aa16.37■□□□□ 0.21
NPAS3-209ENST00000551008 GRM1Q13255 1194 aa16.37■□□□□ 0.21
NPAS3-209ENST00000551008 API5Q9BZZ5 524 aaKnown RBP16.37■□□□□ 0.21
NPAS3-209ENST00000551008 SSC5DA1L4H1 1573 aa16.36■□□□□ 0.21
NPAS3-209ENST00000551008 HSPA8P11142 646 aaKnown RBP16.36■□□□□ 0.21
NPAS3-209ENST00000551008 ECE1P42892 770 aa16.36■□□□□ 0.21
NPAS3-209ENST00000551008 FKBP1AP62942 108 aaKnown RBP16.36■□□□□ 0.21
NPAS3-209ENST00000551008 HNRNPUQ00839 825 aaKnown RBP eCLIP16.36■□□□□ 0.21
NPAS3-209ENST00000551008 GRIK5Q16478 980 aa16.36■□□□□ 0.21
NPAS3-209ENST00000551008 PRAMEF18Q5VWM3 479 aa16.36■□□□□ 0.21
NPAS3-209ENST00000551008 INTS3Q68E01 1043 aaKnown RBP16.36■□□□□ 0.21
NPAS3-209ENST00000551008 PAXIP1Q6ZW49 1069 aaPredicted RBP16.36■□□□□ 0.21
NPAS3-209ENST00000551008 ATG9AQ7Z3C6 839 aa16.36■□□□□ 0.21
NPAS3-209ENST00000551008 FBXO33Q7Z6M2 555 aa16.36■□□□□ 0.21
NPAS3-209ENST00000551008 ARHGAP45Q92619 1136 aa16.36■□□□□ 0.21
NPAS3-209ENST00000551008 KIF16BQ96L93 1317 aa16.36■□□□□ 0.21
NPAS3-209ENST00000551008 COL1A1P02452 1464 aaPredicted RBP16.35■□□□□ 0.21
NPAS3-209ENST00000551008 PDE8BO95263 885 aa16.35■□□□□ 0.21
NPAS3-209ENST00000551008 UBTFL1P0CB47 393 aaPredicted RBP16.35■□□□□ 0.21
NPAS3-209ENST00000551008 TRIM27P14373 513 aa16.35■□□□□ 0.21
NPAS3-209ENST00000551008 METTL24Q5JXM2 366 aa16.35■□□□□ 0.21
NPAS3-209ENST00000551008 MOB2Q70IA6 237 aa16.35■□□□□ 0.21
NPAS3-209ENST00000551008 OGFOD1Q8N543 542 aa16.35■□□□□ 0.21
NPAS3-209ENST00000551008 MTMR14Q8NCE2 650 aa16.35■□□□□ 0.21
NPAS3-209ENST00000551008 LRRFIP2Q9Y608 721 aaKnown RBP16.35■□□□□ 0.21
NPAS3-209ENST00000551008 LAMB1P07942 1786 aa16.35■□□□□ 0.21
NPAS3-209ENST00000551008 AKAP11Q9UKA4 1901 aa16.35■□□□□ 0.21
NPAS3-209ENST00000551008 CASP8AP2Q9UKL3 1982 aa16.35■□□□□ 0.21
NPAS3-209ENST00000551008 EYA2O00167 538 aa16.34■□□□□ 0.21
NPAS3-209ENST00000551008 HIBADHP31937 336 aaKnown RBP16.34■□□□□ 0.21
NPAS3-209ENST00000551008 MAP2K2P36507 400 aa16.34■□□□□ 0.21
NPAS3-209ENST00000551008 OTOFQ9HC10 1997 aa16.34■□□□□ 0.21
NPAS3-209ENST00000551008 F8W031 263 aaPredicted RBP16.33■□□□□ 0.2
NPAS3-209ENST00000551008 CTCFP49711 727 aaPredicted RBP16.33■□□□□ 0.2
NPAS3-209ENST00000551008 MMP14P50281 582 aa16.33■□□□□ 0.2
NPAS3-209ENST00000551008 LBX1P52954 281 aa16.33■□□□□ 0.2
NPAS3-209ENST00000551008 MAP2K1Q02750 393 aaPredicted RBP16.33■□□□□ 0.2
NPAS3-209ENST00000551008 RGMBQ6NW40 437 aa16.33■□□□□ 0.2
NPAS3-209ENST00000551008 PRDM10Q9NQV6 1147 aa16.33■□□□□ 0.2
NPAS3-209ENST00000551008 IQSEC3Q9UPP2 1182 aaPredicted RBP16.33■□□□□ 0.2
NPAS3-209ENST00000551008 PA2G4Q9UQ80 394 aaKnown RBP16.33■□□□□ 0.2
NPAS3-209ENST00000551008 SPDYE2BA6NHP3 402 aa16.32■□□□□ 0.2
NPAS3-209ENST00000551008 SPDYE6P0CI01 402 aa16.32■□□□□ 0.2
NPAS3-209ENST00000551008 CFAP100Q494V2 611 aa16.32■□□□□ 0.2
NPAS3-209ENST00000551008 C2orf69Q8N8R5 385 aa16.32■□□□□ 0.2
NPAS3-209ENST00000551008 PRMT6Q96LA8 375 aaPredicted RBP16.32■□□□□ 0.2
NPAS3-209ENST00000551008 HDAC9Q9UKV0 1011 aa16.32■□□□□ 0.2
NPAS3-209ENST00000551008 SLC10A3P09131 477 aa16.31■□□□□ 0.2
NPAS3-209ENST00000551008 BCAMP50895 628 aa16.31■□□□□ 0.2
NPAS3-209ENST00000551008 MFSD14BQ5SR56 506 aa16.31■□□□□ 0.2
NPAS3-209ENST00000551008 ATF7IPQ6VMQ6 1270 aa16.31■□□□□ 0.2
NPAS3-209ENST00000551008 AIDAQ96BJ3 306 aa16.31■□□□□ 0.2
NPAS3-209ENST00000551008 ZBED9Q6R2W3 1325 aa16.3■□□□□ 0.2
NPAS3-209ENST00000551008 NOGQ13253 232 aa16.3■□□□□ 0.2
NPAS3-209ENST00000551008 PUM3Q15397 648 aaKnown RBP16.3■□□□□ 0.2
NPAS3-209ENST00000551008 DLGAP5Q15398 846 aa16.3■□□□□ 0.2
NPAS3-209ENST00000551008 RASAL3Q86YV0 1011 aa16.3■□□□□ 0.2
NPAS3-209ENST00000551008 APOBEC3FQ8IUX4 373 aaKnown RBP16.3■□□□□ 0.2
NPAS3-209ENST00000551008 TNS4Q8IZW8 715 aa16.3■□□□□ 0.2
NPAS3-209ENST00000551008 SIL1Q9H173 461 aa16.3■□□□□ 0.2
NPAS3-209ENST00000551008 TSKSQ9UJT2 592 aa16.3■□□□□ 0.2
NPAS3-209ENST00000551008 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.3■□□□□ 0.2
NPAS3-209ENST00000551008 CLRN2A0PK11 232 aa16.29■□□□□ 0.2
NPAS3-209ENST00000551008 CIAO1O76071 339 aa16.29■□□□□ 0.2
NPAS3-209ENST00000551008 MTX1Q13505 466 aa16.29■□□□□ 0.2
NPAS3-209ENST00000551008 CLUAP1Q96AJ1 413 aa16.29■□□□□ 0.2
NPAS3-209ENST00000551008 COPRSQ9NQ92 184 aa16.29■□□□□ 0.2
NPAS3-209ENST00000551008 FZD1Q9UP38 647 aa16.29■□□□□ 0.2
NPAS3-209ENST00000551008 UBE2Q2LH0YL09 131 aa16.28■□□□□ 0.2
NPAS3-209ENST00000551008 ZNF157P51786 506 aaPredicted RBP16.28■□□□□ 0.2
NPAS3-209ENST00000551008 FKBP1BP68106 108 aa16.28■□□□□ 0.2
NPAS3-209ENST00000551008 FRAT1Q92837 279 aaPredicted RBP16.28■□□□□ 0.2
NPAS3-209ENST00000551008 FBXO3Q9UK99 471 aa16.28■□□□□ 0.2
NPAS3-209ENST00000551008 TTF2Q9UNY4 1162 aaKnown RBP16.28■□□□□ 0.2
NPAS3-209ENST00000551008 RLBP1P12271 317 aa16.27■□□□□ 0.2
NPAS3-209ENST00000551008 KIF23Q02241 960 aaPredicted RBP16.27■□□□□ 0.2
NPAS3-209ENST00000551008 CHAF1AQ13111 956 aaPredicted RBP16.27■□□□□ 0.2
NPAS3-209ENST00000551008 CDAN1Q8IWY9 1227 aa16.27■□□□□ 0.2
NPAS3-209ENST00000551008 TMEM57Q8N5G2 664 aa16.27■□□□□ 0.2
NPAS3-209ENST00000551008 LPIN2Q92539 896 aa16.27■□□□□ 0.2
NPAS3-209ENST00000551008 DEFB129Q9H1M3 183 aa16.27■□□□□ 0.2
NPAS3-209ENST00000551008 SPDYE2Q495Y8 402 aa16.26■□□□□ 0.19
NPAS3-209ENST00000551008 CCDC102AQ96A19 550 aa16.26■□□□□ 0.19
NPAS3-209ENST00000551008 MYH2Q9UKX2 1941 aa16.25■□□□□ 0.19
NPAS3-209ENST00000551008 PNMA6EA0A0J9YXQ4 647 aa16.25■□□□□ 0.19
NPAS3-209ENST00000551008 IPO8O15397 1037 aaKnown RBP16.25■□□□□ 0.19
NPAS3-209ENST00000551008 GNAI3P08754 354 aa16.25■□□□□ 0.19
NPAS3-209ENST00000551008 IFIT1P09914 478 aaKnown RBP16.25■□□□□ 0.19
NPAS3-209ENST00000551008 SLC5A1P13866 664 aa16.25■□□□□ 0.19
NPAS3-209ENST00000551008 ADORA1P30542 326 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms