RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 PPM1HQ9ULR3 514 aa7.85□□□□□ -1.15
CPSF6-206ENST00000550987 EFSO43281 561 aa7.84□□□□□ -1.15
CPSF6-206ENST00000550987 ATF4P18848 351 aaPredicted RBP7.84□□□□□ -1.15
CPSF6-206ENST00000550987 CCDC144BQ3MJ40 725 aa7.84□□□□□ -1.15
CPSF6-206ENST00000550987 C3orf58Q8NDZ4 430 aa7.84□□□□□ -1.15
CPSF6-206ENST00000550987 STRN4Q9NRL3 753 aa7.84□□□□□ -1.15
CPSF6-206ENST00000550987 SOGA1O94964 1423 aa7.84□□□□□ -1.15
CPSF6-206ENST00000550987 MAGI3Q5TCQ9 1506 aa7.83□□□□□ -1.16
CPSF6-206ENST00000550987 FBXO24O75426 580 aa7.83□□□□□ -1.16
CPSF6-206ENST00000550987 SSBP05455 408 aaKnown RBP eCLIP7.83□□□□□ -1.16
CPSF6-206ENST00000550987 GJA8P48165 433 aa7.83□□□□□ -1.16
CPSF6-206ENST00000550987 PTSQ03393 145 aa7.83□□□□□ -1.16
CPSF6-206ENST00000550987 PRPF40BQ6NWY9 871 aaKnown RBP7.83□□□□□ -1.16
CPSF6-206ENST00000550987 TPTE2Q6XPS3 522 aa7.83□□□□□ -1.16
CPSF6-206ENST00000550987 SV2BQ7L1I2 683 aa7.83□□□□□ -1.16
CPSF6-206ENST00000550987 DHX32Q7L7V1 743 aaKnown RBP7.83□□□□□ -1.16
CPSF6-206ENST00000550987 NOP9Q86U38 636 aaKnown RBP7.83□□□□□ -1.16
CPSF6-206ENST00000550987 TMEM74Q96NL1 305 aa7.83□□□□□ -1.16
CPSF6-206ENST00000550987 ZKSCAN3Q9BRR0 538 aa7.83□□□□□ -1.16
CPSF6-206ENST00000550987 CEP44Q9C0F1 390 aa7.83□□□□□ -1.16
CPSF6-206ENST00000550987 SOBPA7XYQ1 873 aa7.82□□□□□ -1.16
CPSF6-206ENST00000550987 BNIP3LO60238 219 aa7.82□□□□□ -1.16
CPSF6-206ENST00000550987 GFRA3O60609 400 aa7.82□□□□□ -1.16
CPSF6-206ENST00000550987 RGS20O76081 388 aa7.82□□□□□ -1.16
CPSF6-206ENST00000550987 MAP3K6O95382 1288 aa7.82□□□□□ -1.16
CPSF6-206ENST00000550987 LMNB1P20700 586 aa7.82□□□□□ -1.16
CPSF6-206ENST00000550987 SOX18P35713 384 aa7.82□□□□□ -1.16
CPSF6-206ENST00000550987 EIF4A3P38919 411 aaKnown RBP7.82□□□□□ -1.16
CPSF6-206ENST00000550987 RBL2Q08999 1139 aa7.82□□□□□ -1.16
CPSF6-206ENST00000550987 DBN1Q16643 649 aa7.82□□□□□ -1.16
CPSF6-206ENST00000550987 RAB44Q7Z6P3 723 aaPredicted RBP7.82□□□□□ -1.16
CPSF6-206ENST00000550987 MCF2L2Q86YR7 1114 aa7.82□□□□□ -1.16
CPSF6-206ENST00000550987 CCNJLQ8IV13 435 aa7.82□□□□□ -1.16
CPSF6-206ENST00000550987 ASAP3Q8TDY4 903 aa7.82□□□□□ -1.16
CPSF6-206ENST00000550987 ABHD17AQ96GS6 310 aa7.82□□□□□ -1.16
CPSF6-206ENST00000550987 NSUN5Q96P11 429 aaKnown RBP7.82□□□□□ -1.16
CPSF6-206ENST00000550987 ZSWIM4Q9H7M6 989 aa7.82□□□□□ -1.16
CPSF6-206ENST00000550987 ABCB6Q9NP58 842 aa7.82□□□□□ -1.16
CPSF6-206ENST00000550987 PRR12Q9ULL5 1215 aa7.82□□□□□ -1.16
CPSF6-206ENST00000550987 PHF24Q9UPV7 400 aa7.82□□□□□ -1.16
CPSF6-206ENST00000550987 ARAP3Q8WWN8 1544 aa7.82□□□□□ -1.16
CPSF6-206ENST00000550987 POTECB2RU33 542 aa7.81□□□□□ -1.16
CPSF6-206ENST00000550987 TRPA1O75762 1119 aa7.81□□□□□ -1.16
CPSF6-206ENST00000550987 CD33P20138 364 aa7.81□□□□□ -1.16
CPSF6-206ENST00000550987 GRIN2CQ14957 1233 aa7.81□□□□□ -1.16
CPSF6-206ENST00000550987 COL13A1Q5TAT6 717 aaPredicted RBP7.81□□□□□ -1.16
CPSF6-206ENST00000550987 FOXR1Q6PIV2 292 aa7.81□□□□□ -1.16
CPSF6-206ENST00000550987 TRIM22Q8IYM9 498 aa7.81□□□□□ -1.16
CPSF6-206ENST00000550987 ZNF296Q8WUU4 475 aaPredicted RBP7.81□□□□□ -1.16
CPSF6-206ENST00000550987 SEC16BQ96JE7 1060 aa7.81□□□□□ -1.16
CPSF6-206ENST00000550987 TCF12Q99081 682 aa7.81□□□□□ -1.16
CPSF6-206ENST00000550987 TRIM56Q9BRZ2 755 aaKnown RBP7.81□□□□□ -1.16
CPSF6-206ENST00000550987 RBSNQ9H1K0 784 aa7.81□□□□□ -1.16
CPSF6-206ENST00000550987 CPS1P31327 1500 aa7.8□□□□□ -1.16
CPSF6-206ENST00000550987 ARHGEF40Q8TER5 1519 aa7.8□□□□□ -1.16
CPSF6-206ENST00000550987 LOC102724428A0A0B4J2F2 783 aa7.8□□□□□ -1.16
CPSF6-206ENST00000550987 SLC35F4A4IF30 521 aa7.8□□□□□ -1.16
CPSF6-206ENST00000550987 GHRHP01286 108 aa7.8□□□□□ -1.16
CPSF6-206ENST00000550987 SIK1P57059 783 aa7.8□□□□□ -1.16
CPSF6-206ENST00000550987 TBC1D8BQ0IIM8 1120 aa7.8□□□□□ -1.16
CPSF6-206ENST00000550987 DIEXFQ68CQ4 756 aaKnown RBP7.8□□□□□ -1.16
CPSF6-206ENST00000550987 GIMAP6Q6P9H5 292 aa7.8□□□□□ -1.16
CPSF6-206ENST00000550987 CKAP2LQ8IYA6 745 aa7.8□□□□□ -1.16
CPSF6-206ENST00000550987 CCDC155Q8N6L0 562 aa7.8□□□□□ -1.16
CPSF6-206ENST00000550987 CEP120Q8N960 986 aa7.8□□□□□ -1.16
CPSF6-206ENST00000550987 CPLX3Q8WVH0 158 aa7.8□□□□□ -1.16
CPSF6-206ENST00000550987 GMCL1Q96IK5 515 aa7.8□□□□□ -1.16
CPSF6-206ENST00000550987 SLC30A3Q99726 388 aa7.8□□□□□ -1.16
CPSF6-206ENST00000550987 ATP13A2Q9NQ11 1180 aa7.8□□□□□ -1.16
CPSF6-206ENST00000550987 DZANK1Q9NVP4 752 aa7.8□□□□□ -1.16
CPSF6-206ENST00000550987 ADAMTS1Q9UHI8 967 aa7.8□□□□□ -1.16
CPSF6-206ENST00000550987 SIGLEC1Q9BZZ2 1709 aa7.8□□□□□ -1.16
CPSF6-206ENST00000550987 PDE2AO00408 941 aaPredicted RBP7.79□□□□□ -1.16
CPSF6-206ENST00000550987 KIF4AO95239 1232 aa7.79□□□□□ -1.16
CPSF6-206ENST00000550987 FGRP09769 529 aa7.79□□□□□ -1.16
CPSF6-206ENST00000550987 ACPPP15309 386 aa7.79□□□□□ -1.16
CPSF6-206ENST00000550987 GRIA4P48058 902 aa7.79□□□□□ -1.16
CPSF6-206ENST00000550987 NRLP54845 237 aa7.79□□□□□ -1.16
CPSF6-206ENST00000550987 MLLT1Q03111 559 aaPredicted RBP7.79□□□□□ -1.16
CPSF6-206ENST00000550987 FAM160A1Q05DH4 1040 aa7.79□□□□□ -1.16
CPSF6-206ENST00000550987 PCSK7Q16549 785 aa7.79□□□□□ -1.16
CPSF6-206ENST00000550987 SPRED3Q2MJR0 410 aa7.79□□□□□ -1.16
CPSF6-206ENST00000550987 SNAP47Q5SQN1 464 aa7.79□□□□□ -1.16
CPSF6-206ENST00000550987 HFE2Q6ZVN8 426 aa7.79□□□□□ -1.16
CPSF6-206ENST00000550987 MICALL1Q8N3F8 863 aa7.79□□□□□ -1.16
CPSF6-206ENST00000550987 GTPBP3Q969Y2 492 aaKnown RBP7.79□□□□□ -1.16
CPSF6-206ENST00000550987 TRERF1Q96PN7 1200 aa7.79□□□□□ -1.16
CPSF6-206ENST00000550987 GPN3Q9UHW5 284 aaPredicted RBP7.79□□□□□ -1.16
CPSF6-206ENST00000550987 ATXN7L1Q9ULK2 861 aaPredicted RBP7.79□□□□□ -1.16
CPSF6-206ENST00000550987 EFR3BQ9Y2G0 817 aa7.79□□□□□ -1.16
CPSF6-206ENST00000550987 TMA7Q9Y2S6 64 aaKnown RBP7.79□□□□□ -1.16
CPSF6-206ENST00000550987 A0A096LPE4 126 aa7.78□□□□□ -1.16
CPSF6-206ENST00000550987 A0A1W2PPZ6 126 aa7.78□□□□□ -1.16
CPSF6-206ENST00000550987 J3QW42 95 aa7.78□□□□□ -1.16
CPSF6-206ENST00000550987 THBS1P07996 1170 aa7.78□□□□□ -1.16
CPSF6-206ENST00000550987 NASPP49321 788 aaPredicted RBP7.78□□□□□ -1.16
CPSF6-206ENST00000550987 RASGRP4Q8TDF6 673 aa7.78□□□□□ -1.16
CPSF6-206ENST00000550987 ANKRD24Q8TF21 1146 aa7.78□□□□□ -1.16
CPSF6-206ENST00000550987 NXPE3Q969Y0 559 aa7.78□□□□□ -1.16
CPSF6-206ENST00000550987 SUPT16HQ9Y5B9 1047 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms