RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 LNPKQ9C0E8 428 aa16.01■□□□□ 0.15
RAB5C-206ENST00000550406 WDR90Q96KV7 1748 aa16■□□□□ 0.15
RAB5C-206ENST00000550406 GLTPD2A6NH11 291 aa16■□□□□ 0.15
RAB5C-206ENST00000550406 MCAMP43121 646 aa16■□□□□ 0.15
RAB5C-206ENST00000550406 RASGRF1Q13972 1273 aa16■□□□□ 0.15
RAB5C-206ENST00000550406 GORABQ5T7V8 394 aa16■□□□□ 0.15
RAB5C-206ENST00000550406 STRIP1Q5VSL9 837 aa16■□□□□ 0.15
RAB5C-206ENST00000550406 PI16Q6UXB8 463 aa16■□□□□ 0.15
RAB5C-206ENST00000550406 CERS5Q8N5B7 392 aa16■□□□□ 0.15
RAB5C-206ENST00000550406 CCDC136Q96JN2 1154 aa16■□□□□ 0.15
RAB5C-206ENST00000550406 ZNF512BQ96KM6 892 aaPredicted RBP16■□□□□ 0.15
RAB5C-206ENST00000550406 GMLQ99445 158 aa16■□□□□ 0.15
RAB5C-206ENST00000550406 HMG20BQ9P0W2 317 aa16■□□□□ 0.15
RAB5C-206ENST00000550406 ZBTB12Q9Y330 459 aaPredicted RBP16■□□□□ 0.15
RAB5C-206ENST00000550406 POTECB2RU33 542 aa15.99■□□□□ 0.15
RAB5C-206ENST00000550406 PDE4AP27815 886 aa15.99■□□□□ 0.15
RAB5C-206ENST00000550406 CHAF1AQ13111 956 aaPredicted RBP15.99■□□□□ 0.15
RAB5C-206ENST00000550406 GRIK5Q16478 980 aa15.99■□□□□ 0.15
RAB5C-206ENST00000550406 CCDC158Q5M9N0 1113 aa15.99■□□□□ 0.15
RAB5C-206ENST00000550406 TTC39AQ5SRH9 613 aa15.99■□□□□ 0.15
RAB5C-206ENST00000550406 GPC2Q8N158 579 aa15.99■□□□□ 0.15
RAB5C-206ENST00000550406 GNL3LQ9NVN8 582 aaKnown RBP15.99■□□□□ 0.15
RAB5C-206ENST00000550406 GJA3Q9Y6H8 435 aa15.99■□□□□ 0.15
RAB5C-206ENST00000550406 UQCRFS1P1P0C7P4 283 aa15.98■□□□□ 0.15
RAB5C-206ENST00000550406 TNIP1Q15025 636 aa15.98■□□□□ 0.15
RAB5C-206ENST00000550406 TSHZ3Q63HK5 1081 aa15.98■□□□□ 0.15
RAB5C-206ENST00000550406 RSBN1LQ6PCB5 846 aaPredicted RBP15.98■□□□□ 0.15
RAB5C-206ENST00000550406 FBXW7Q969H0 707 aa15.98■□□□□ 0.15
RAB5C-206ENST00000550406 SNRKQ9NRH2 765 aa15.98■□□□□ 0.15
RAB5C-206ENST00000550406 DENND2AQ9ULE3 1009 aa15.98■□□□□ 0.15
RAB5C-206ENST00000550406 SCN4AP35499 1836 aa15.98■□□□□ 0.15
RAB5C-206ENST00000550406 DOCK2Q92608 1830 aa15.97■□□□□ 0.15
RAB5C-206ENST00000550406 SHTN1A0MZ66 631 aa15.97■□□□□ 0.15
RAB5C-206ENST00000550406 SEMA3EO15041 775 aa15.97■□□□□ 0.15
RAB5C-206ENST00000550406 ATP5JP18859 108 aa15.97■□□□□ 0.15
RAB5C-206ENST00000550406 GMPSP49915 693 aaPredicted RBP15.97■□□□□ 0.15
RAB5C-206ENST00000550406 SCNN1DP51172 638 aa15.97■□□□□ 0.15
RAB5C-206ENST00000550406 DPY19L2Q6NUT2 758 aa15.97■□□□□ 0.15
RAB5C-206ENST00000550406 CENPQQ7L2Z9 268 aaPredicted RBP15.97■□□□□ 0.15
RAB5C-206ENST00000550406 SPATA5Q8NB90 893 aa15.97■□□□□ 0.15
RAB5C-206ENST00000550406 NDUFB9Q9Y6M9 179 aa15.97■□□□□ 0.15
RAB5C-206ENST00000550406 ADAMTSL1Q8N6G6 1762 aa15.97■□□□□ 0.15
RAB5C-206ENST00000550406 PDS5AQ29RF7 1337 aaKnown RBP15.96■□□□□ 0.15
RAB5C-206ENST00000550406 FRAT2O75474 233 aaPredicted RBP15.96■□□□□ 0.15
RAB5C-206ENST00000550406 FKBP1AP62942 108 aaKnown RBP15.96■□□□□ 0.15
RAB5C-206ENST00000550406 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.96■□□□□ 0.15
RAB5C-206ENST00000550406 L3MBTL3Q96JM7 780 aaPredicted RBP15.96■□□□□ 0.15
RAB5C-206ENST00000550406 ECHDC1Q9NTX5 307 aa15.96■□□□□ 0.15
RAB5C-206ENST00000550406 STAP2Q9UGK3 403 aa15.96■□□□□ 0.15
RAB5C-206ENST00000550406 CYP2E1P05181 493 aaPredicted RBP15.95■□□□□ 0.14
RAB5C-206ENST00000550406 ZAP70P43403 619 aa15.95■□□□□ 0.14
RAB5C-206ENST00000550406 PDE1AP54750 535 aa15.95■□□□□ 0.14
RAB5C-206ENST00000550406 MFSD14BQ5SR56 506 aa15.95■□□□□ 0.14
RAB5C-206ENST00000550406 TBC1D9Q6ZT07 1266 aa15.95■□□□□ 0.14
RAB5C-206ENST00000550406 SKAP1Q86WV1 359 aa15.95■□□□□ 0.14
RAB5C-206ENST00000550406 PLEKHM2Q8IWE5 1019 aa15.95■□□□□ 0.14
RAB5C-206ENST00000550406 AGBL3Q8NEM8 1001 aa15.95■□□□□ 0.14
RAB5C-206ENST00000550406 PI4K2BQ8TCG2 481 aa15.95■□□□□ 0.14
RAB5C-206ENST00000550406 BOLA2Q9H3K6 86 aa15.95■□□□□ 0.14
RAB5C-206ENST00000550406 MYH2Q9UKX2 1941 aa15.95■□□□□ 0.14
RAB5C-206ENST00000550406 SALL1Q9NSC2 1324 aa15.94■□□□□ 0.14
RAB5C-206ENST00000550406 MYH7P12883 1935 aa15.94■□□□□ 0.14
RAB5C-206ENST00000550406 MX1P20591 662 aa15.94■□□□□ 0.14
RAB5C-206ENST00000550406 YY1P25490 414 aa15.94■□□□□ 0.14
RAB5C-206ENST00000550406 WDR66Q8TBY9 1149 aa15.94■□□□□ 0.14
RAB5C-206ENST00000550406 DPF2Q92785 391 aa15.94■□□□□ 0.14
RAB5C-206ENST00000550406 EDC3Q96F86 508 aaKnown RBP15.94■□□□□ 0.14
RAB5C-206ENST00000550406 ANTXR1Q9H6X2 564 aa15.94■□□□□ 0.14
RAB5C-206ENST00000550406 GPRC5DQ9NZD1 345 aa15.94■□□□□ 0.14
RAB5C-206ENST00000550406 ZBTB47Q9UFB7 747 aaPredicted RBP15.94■□□□□ 0.14
RAB5C-206ENST00000550406 TTC41PQ6P2S7 1318 aa15.94■□□□□ 0.14
RAB5C-206ENST00000550406 RPS12P25398 132 aaKnown RBP15.93■□□□□ 0.14
RAB5C-206ENST00000550406 EPS15P42566 896 aa15.93■□□□□ 0.14
RAB5C-206ENST00000550406 KIAA0825Q8IV33 1275 aa15.93■□□□□ 0.14
RAB5C-206ENST00000550406 ZNF526Q8TF50 670 aaPredicted RBP15.93■□□□□ 0.14
RAB5C-206ENST00000550406 TBC1D22AQ8WUA7 517 aa15.93■□□□□ 0.14
RAB5C-206ENST00000550406 HAUS7Q99871 368 aa15.93■□□□□ 0.14
RAB5C-206ENST00000550406 RRAGCQ9HB90 399 aa15.93■□□□□ 0.14
RAB5C-206ENST00000550406 PIH1D3Q9NQM4 214 aaKnown RBP15.93■□□□□ 0.14
RAB5C-206ENST00000550406 CNOT7Q9UIV1 285 aaKnown RBP15.93■□□□□ 0.14
RAB5C-206ENST00000550406 POLR2AP24928 1970 aaKnown RBP15.93■□□□□ 0.14
RAB5C-206ENST00000550406 MYO3BQ8WXR4 1341 aa15.93■□□□□ 0.14
RAB5C-206ENST00000550406 F8W031 263 aaPredicted RBP15.92■□□□□ 0.14
RAB5C-206ENST00000550406 EGFRP00533 1210 aa15.92■□□□□ 0.14
RAB5C-206ENST00000550406 PRDX5P30044 214 aa15.92■□□□□ 0.14
RAB5C-206ENST00000550406 ZNF280AP59817 542 aaPredicted RBP15.92■□□□□ 0.14
RAB5C-206ENST00000550406 MICALL2Q8IY33 904 aa15.92■□□□□ 0.14
RAB5C-206ENST00000550406 ZNF384Q8TF68 577 aa15.92■□□□□ 0.14
RAB5C-206ENST00000550406 OSBPL3Q9H4L5 887 aa15.92■□□□□ 0.14
RAB5C-206ENST00000550406 NMRK2Q9NPI5 230 aa15.92■□□□□ 0.14
RAB5C-206ENST00000550406 USP17L8P0C7I0 530 aa15.91■□□□□ 0.14
RAB5C-206ENST00000550406 PCDHAC2Q9Y5I4 1007 aa15.91■□□□□ 0.14
RAB5C-206ENST00000550406 AK9Q5TCS8 1911 aa15.91■□□□□ 0.14
RAB5C-206ENST00000550406 MAST2Q6P0Q8 1798 aa15.9■□□□□ 0.14
RAB5C-206ENST00000550406 ECM29Q5VYK3 1845 aa15.9■□□□□ 0.14
RAB5C-206ENST00000550406 SAMD7Q7Z3H4 446 aa15.9■□□□□ 0.14
RAB5C-206ENST00000550406 GPATCH3Q96I76 525 aa15.9■□□□□ 0.14
RAB5C-206ENST00000550406 DNAJC2Q99543 621 aaKnown RBP15.9■□□□□ 0.14
RAB5C-206ENST00000550406 ABCF2Q9UG63 623 aa15.9■□□□□ 0.14
RAB5C-206ENST00000550406 TTF2Q9UNY4 1162 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms