RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 MAP3K11Q16584 847 aa8.75□□□□□ -1.01
TGFBR1-208ENST00000550253 DTHD1Q6ZMT9 781 aa8.75□□□□□ -1.01
TGFBR1-208ENST00000550253 LIN7BQ9HAP6 207 aa8.75□□□□□ -1.01
TGFBR1-208ENST00000550253 TLR6Q9Y2C9 796 aa8.75□□□□□ -1.01
TGFBR1-208ENST00000550253 RAPGEF6Q8TEU7 1601 aa8.74□□□□□ -1.01
TGFBR1-208ENST00000550253 TNFRSF10AO00220 468 aa8.74□□□□□ -1.01
TGFBR1-208ENST00000550253 CAPN5O15484 640 aaPredicted RBP8.74□□□□□ -1.01
TGFBR1-208ENST00000550253 MMP20O60882 483 aa8.74□□□□□ -1.01
TGFBR1-208ENST00000550253 RAPGEF3O95398 923 aa8.74□□□□□ -1.01
TGFBR1-208ENST00000550253 BMP2P12643 396 aa8.74□□□□□ -1.01
TGFBR1-208ENST00000550253 TARSP26639 723 aaKnown RBP8.74□□□□□ -1.01
TGFBR1-208ENST00000550253 LIG3P49916 1009 aa8.74□□□□□ -1.01
TGFBR1-208ENST00000550253 PTPROQ16827 1216 aa8.74□□□□□ -1.01
TGFBR1-208ENST00000550253 NLRP8Q86W28 1048 aa8.74□□□□□ -1.01
TGFBR1-208ENST00000550253 CCNJLQ8IV13 435 aa8.74□□□□□ -1.01
TGFBR1-208ENST00000550253 SRPK1Q96SB4 655 aaKnown RBP8.74□□□□□ -1.01
TGFBR1-208ENST00000550253 GSX2Q9BZM3 304 aa8.74□□□□□ -1.01
TGFBR1-208ENST00000550253 RUBCNLQ9H714 662 aa8.74□□□□□ -1.01
TGFBR1-208ENST00000550253 SUPT16HQ9Y5B9 1047 aaKnown RBP8.74□□□□□ -1.01
TGFBR1-208ENST00000550253 RICTORQ6R327 1708 aa8.73□□□□□ -1.01
TGFBR1-208ENST00000550253 RIMS1Q86UR5 1692 aaKnown RBP8.73□□□□□ -1.01
TGFBR1-208ENST00000550253 LMTK3Q96Q04 1460 aa8.73□□□□□ -1.01
TGFBR1-208ENST00000550253 PF4P02776 101 aa8.73□□□□□ -1.01
TGFBR1-208ENST00000550253 FAM160A1Q05DH4 1040 aa8.73□□□□□ -1.01
TGFBR1-208ENST00000550253 KCNB2Q92953 911 aa8.73□□□□□ -1.01
TGFBR1-208ENST00000550253 RNPC3Q96LT9 517 aaKnown RBP8.73□□□□□ -1.01
TGFBR1-208ENST00000550253 CNTNAP3BQ96NU0 1288 aa8.73□□□□□ -1.01
TGFBR1-208ENST00000550253 CNTNAP3Q9BZ76 1288 aa8.73□□□□□ -1.01
TGFBR1-208ENST00000550253 UBP1Q9NZI7 540 aa8.73□□□□□ -1.01
TGFBR1-208ENST00000550253 KCNH4Q9UQ05 1017 aa8.73□□□□□ -1.01
TGFBR1-208ENST00000550253 PCF11O94913 1555 aaKnown RBP8.72□□□□□ -1.01
TGFBR1-208ENST00000550253 PHF20L1A8MW92 1017 aa8.72□□□□□ -1.01
TGFBR1-208ENST00000550253 CLSTN1O94985 981 aa8.72□□□□□ -1.01
TGFBR1-208ENST00000550253 CELA3AP09093 270 aa8.72□□□□□ -1.01
TGFBR1-208ENST00000550253 CCINQ13939 588 aa8.72□□□□□ -1.01
TGFBR1-208ENST00000550253 PCNX4Q63HM2 1172 aa8.72□□□□□ -1.01
TGFBR1-208ENST00000550253 TPTE2Q6XPS3 522 aa8.72□□□□□ -1.01
TGFBR1-208ENST00000550253 FBXO41Q8TF61 875 aa8.72□□□□□ -1.01
TGFBR1-208ENST00000550253 HNRNPLLQ8WVV9 542 aaKnown RBP8.72□□□□□ -1.01
TGFBR1-208ENST00000550253 TRIM55Q9BYV6 548 aa8.72□□□□□ -1.01
TGFBR1-208ENST00000550253 GPAMQ9HCL2 828 aa8.72□□□□□ -1.01
TGFBR1-208ENST00000550253 SNTG2Q9NY99 539 aa8.72□□□□□ -1.01
TGFBR1-208ENST00000550253 KIF4AO95239 1232 aa8.71□□□□□ -1.01
TGFBR1-208ENST00000550253 LMNB2Q03252 620 aa8.71□□□□□ -1.01
TGFBR1-208ENST00000550253 CAMK2GQ13555 558 aaPredicted RBP8.71□□□□□ -1.01
TGFBR1-208ENST00000550253 RASA3Q14644 834 aa8.71□□□□□ -1.01
TGFBR1-208ENST00000550253 C6orf118Q5T5N4 469 aa8.71□□□□□ -1.01
TGFBR1-208ENST00000550253 POTEGQ6S5H5 508 aa8.71□□□□□ -1.01
TGFBR1-208ENST00000550253 KRT25Q7Z3Z0 450 aa8.71□□□□□ -1.01
TGFBR1-208ENST00000550253 ZKSCAN3Q9BRR0 538 aa8.71□□□□□ -1.01
TGFBR1-208ENST00000550253 ZFATQ9P243 1243 aa8.71□□□□□ -1.01
TGFBR1-208ENST00000550253 PRKAG3Q9UGI9 489 aa8.71□□□□□ -1.01
TGFBR1-208ENST00000550253 ARHGEF40Q8TER5 1519 aa8.71□□□□□ -1.02
TGFBR1-208ENST00000550253 NUP153P49790 1475 aaKnown RBP8.71□□□□□ -1.02
TGFBR1-208ENST00000550253 CRKP46108 304 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 SFSWAPQ12872 951 aaKnown RBP8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 COL13A1Q5TAT6 717 aaPredicted RBP8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 LRP10Q7Z4F1 713 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 SLITRK4Q8IW52 837 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 GOLM1Q8NBJ4 401 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 CEP44Q9C0F1 390 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 ZFYVE1Q9HBF4 777 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 NEO1Q92859 1461 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 FAM221BA6H8Z2 402 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 TTLL8A6PVC2 850 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 ENC1O14682 589 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 U2SURPO15042 1029 aaKnown RBP8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 EFSO43281 561 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 F11P03951 625 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 GRIA4P48058 902 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 AGMOQ6ZNB7 445 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 TRIM67Q6ZTA4 783 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 CPLX3Q8WVH0 158 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 ANAPC16Q96DE5 110 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 SHDQ96IW2 340 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 DEPDC7Q96QD5 511 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 OSMRQ99650 979 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 SRRTQ9BXP5 876 aaKnown RBP8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 BRINP2Q9C0B6 783 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 DYRK1BQ9Y463 629 aa8.7□□□□□ -1.02
TGFBR1-208ENST00000550253 ACPPP15309 386 aa8.69□□□□□ -1.02
TGFBR1-208ENST00000550253 TFE3P19532 575 aaPredicted RBP8.69□□□□□ -1.02
TGFBR1-208ENST00000550253 ITPKAP23677 461 aa8.69□□□□□ -1.02
TGFBR1-208ENST00000550253 APOBRQ0VD83 1088 aa8.69□□□□□ -1.02
TGFBR1-208ENST00000550253 GRIN2CQ14957 1233 aa8.69□□□□□ -1.02
TGFBR1-208ENST00000550253 SNAP47Q5SQN1 464 aa8.69□□□□□ -1.02
TGFBR1-208ENST00000550253 MRPL14Q6P1L8 145 aaKnown RBP8.69□□□□□ -1.02
TGFBR1-208ENST00000550253 FAM196AQ6ZSG2 479 aa8.69□□□□□ -1.02
TGFBR1-208ENST00000550253 PGBD3Q8N328 593 aa8.69□□□□□ -1.02
TGFBR1-208ENST00000550253 NKD1Q969G9 470 aa8.69□□□□□ -1.02
TGFBR1-208ENST00000550253 NECAB3Q96P71 396 aaPredicted RBP8.69□□□□□ -1.02
TGFBR1-208ENST00000550253 CWC22Q9HCG8 908 aaKnown RBP8.69□□□□□ -1.02
TGFBR1-208ENST00000550253 DZANK1Q9NVP4 752 aa8.69□□□□□ -1.02
TGFBR1-208ENST00000550253 TTC37Q6PGP7 1564 aa8.68□□□□□ -1.02
TGFBR1-208ENST00000550253 SOS2Q07890 1332 aaPredicted RBP8.68□□□□□ -1.02
TGFBR1-208ENST00000550253 RAB11FIP3O75154 756 aa8.68□□□□□ -1.02
TGFBR1-208ENST00000550253 FAM157BP0CG42 384 aa8.68□□□□□ -1.02
TGFBR1-208ENST00000550253 RARAP10276 462 aa8.68□□□□□ -1.02
TGFBR1-208ENST00000550253 SOX18P35713 384 aa8.68□□□□□ -1.02
TGFBR1-208ENST00000550253 IGBP1P78318 339 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms