RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 ZNF569Q5MCW4 686 aa11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 IQCEQ6IPM2 695 aa11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 ZNF790Q6PG37 636 aa11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 CTAGE6Q86UF2 777 aa11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 CTAGE4Q8IX94 777 aa11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 ZNF594Q96JF6 807 aaPredicted RBP11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 HELLSQ9NRZ9 838 aa11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 KAT6BQ8WYB5 2073 aa11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 CPSF1Q10570 1443 aaKnown RBP11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 A0A1B0GUL7 405 aa11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 PPP2R3AQ06190 1150 aa11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 C10orf67Q8IYJ2 551 aa11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 METTL22Q9BUU2 404 aaPredicted RBP11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 RSPH14Q9UHP6 348 aa11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.7□□□□□ -0.549e-8■■■■□ 20.3
SMARCC2-209ENST00000550164 GIGYF1O75420 1035 aaPredicted RBP11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 STARD3NLO95772 234 aa11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 ATP5JP18859 108 aa11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 SCRN1Q12765 414 aa11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 SPA17Q15506 151 aa11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 E7EWF7 191 aa11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 RDXP35241 583 aaKnown RBP11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 NLRP12P59046 1061 aa11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 WTAPQ15007 396 aa11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 NECTIN1Q15223 517 aa11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 UTP14CQ5TAP6 766 aaKnown RBP11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 PCDHA7Q9UN72 937 aa11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 RNF17Q9BXT8 1623 aaKnown RBP11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 QRICH2Q9H0J4 1663 aa11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 YEATS2Q9ULM3 1422 aa11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 MATR3P43243 847 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 CDR1P51861 262 aa11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 RTN1Q16799 776 aa11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 CTCFLQ8NI51 663 aaPredicted RBP11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 TTC14Q96N46 770 aa11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 SSBP05455 408 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 NLRP5P59047 1200 aa11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 NCBP1Q09161 790 aaKnown RBP11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 TTF1Q15361 905 aaPredicted RBP11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 RRAGBQ5VZM2 374 aa11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 ADALQ6DHV7 355 aa11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 CTR9Q6PD62 1173 aa11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 ZHX3Q9H4I2 956 aa11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 KCNH3Q9ULD8 1083 aa11.69□□□□□ -0.54
SMARCC2-209ENST00000550164 CTAGE9A4FU28 777 aa11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 G3V3G9 751 aa11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 CYP21A2P08686 494 aa11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 DCAF8Q5TAQ9 597 aa11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 KRBA2Q6ZNG9 492 aa11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 IQCA1Q86XH1 822 aa11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 PHKBQ93100 1093 aa11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 JADE2Q9NQC1 790 aa11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 GOLGA6L10A6NI86 522 aa11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 NDUFA8P51970 172 aa11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 KRI1Q8N9T8 703 aaKnown RBP11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 GLI2P10070 1586 aa11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 CFAP74Q9C0B2 1584 aa11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 B4E1Z4 1266 aa11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 ETF1P62495 437 aaKnown RBP11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 MTX1Q13505 466 aa11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 MYSM1Q5VVJ2 828 aa11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 IL25Q9H293 177 aa11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 RNF41Q9H4P4 317 aaPredicted RBP11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 SPTLC3Q9NUV7 552 aa11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 TMOD3Q9NYL9 352 aa11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 NFE2L3Q9Y4A8 694 aa11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 TULP4Q9NRJ4 1543 aa11.68□□□□□ -0.54
SMARCC2-209ENST00000550164 ZCCHC11Q5TAX3 1644 aaKnown RBP11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 IQGAP1P46940 1657 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 VGLL3A8MV65 326 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 PFKFB2O60825 505 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 IGHMBP2P38935 993 aaKnown RBP11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 POLA2Q14181 598 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 MYL10Q9BUA6 226 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 IGSF1Q8N6C5 1336 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 NEURL1BA8MQ27 555 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 ENOX2Q16206 610 aaKnown RBP11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 PTPN21Q16825 1174 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 DPCR1Q3MIW9 517 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 CATIPQ7Z7H3 387 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 NUTM2AQ8IVF1 878 aaPredicted RBP11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 DHX37Q8IY37 1157 aaKnown RBP11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 TRMT44Q8IYL2 757 aaKnown RBP11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 CEP112Q8N8E3 955 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 ZKSCAN3Q9BRR0 538 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 IQSEC3Q9UPP2 1182 aaPredicted RBP11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 SHTN1A0MZ66 631 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 PFKFB1P16118 471 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 PNOCQ13519 176 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 DBNLQ9UJU6 430 aaKnown RBP11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 GUCA1BQ9UMX6 200 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 PRAMEF22A3QJZ6 481 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 EYA2O00167 538 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 POLR2DO15514 142 aaKnown RBP11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 ARHGAP6O43182 974 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 SLC5A1P13866 664 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 ODF2Q5BJF6 829 aa11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 HELBQ8NG08 1087 aaPredicted RBP11.67□□□□□ -0.54
SMARCC2-209ENST00000550164 ZNF496Q96IT1 587 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms