RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 NUDT8Q8WV74 236 aa8.08□□□□□ -1.12
PFDN5-209ENST00000550069 TRIM11Q96F44 468 aa8.08□□□□□ -1.12
PFDN5-209ENST00000550069 ZNF587Q96SQ5 575 aaPredicted RBP8.08□□□□□ -1.12
PFDN5-209ENST00000550069 TLR7Q9NYK1 1049 aaKnown RBP8.08□□□□□ -1.12
PFDN5-209ENST00000550069 CNTN3Q9P232 1028 aa8.08□□□□□ -1.12
PFDN5-209ENST00000550069 ABCC5O15440 1437 aa8.08□□□□□ -1.12
PFDN5-209ENST00000550069 NPATQ14207 1427 aa8.08□□□□□ -1.12
PFDN5-209ENST00000550069 ARID4BQ4LE39 1312 aaPredicted RBP8.07□□□□□ -1.12
PFDN5-209ENST00000550069 NCOA1Q15788 1441 aa8.07□□□□□ -1.12
PFDN5-209ENST00000550069 MZF1P28698 734 aaPredicted RBP8.07□□□□□ -1.12
PFDN5-209ENST00000550069 PERM1Q5SV97 790 aa8.07□□□□□ -1.12
PFDN5-209ENST00000550069 GLYCTKQ8IVS8 523 aa8.07□□□□□ -1.12
PFDN5-209ENST00000550069 MICALL1Q8N3F8 863 aa8.07□□□□□ -1.12
PFDN5-209ENST00000550069 TRPM4Q8TD43 1214 aa8.07□□□□□ -1.12
PFDN5-209ENST00000550069 TRAIPQ9BWF2 469 aa8.07□□□□□ -1.12
PFDN5-209ENST00000550069 IVNS1ABPQ9Y6Y0 642 aa8.07□□□□□ -1.12
PFDN5-209ENST00000550069 SOWAHDA6NJG2 315 aa8.06□□□□□ -1.12
PFDN5-209ENST00000550069 FAM13AO94988 1023 aa8.06□□□□□ -1.12
PFDN5-209ENST00000550069 GPLD1P80108 840 aa8.06□□□□□ -1.12
PFDN5-209ENST00000550069 AAMPQ13685 434 aa8.06□□□□□ -1.12
PFDN5-209ENST00000550069 C8orf34Q49A92 452 aa8.06□□□□□ -1.12
PFDN5-209ENST00000550069 PSAPL1Q6NUJ1 521 aa8.06□□□□□ -1.12
PFDN5-209ENST00000550069 ADAMTSL4Q6UY14 1074 aa8.06□□□□□ -1.12
PFDN5-209ENST00000550069 FAM35AQ86V20 835 aa8.06□□□□□ -1.12
PFDN5-209ENST00000550069 LPIN3Q9BQK8 851 aa8.06□□□□□ -1.12
PFDN5-209ENST00000550069 C11orf16Q9NQ32 467 aa8.06□□□□□ -1.12
PFDN5-209ENST00000550069 KANSL3Q9P2N6 904 aa8.06□□□□□ -1.12
PFDN5-209ENST00000550069 MTMR7Q9Y216 660 aa8.06□□□□□ -1.12
PFDN5-209ENST00000550069 GNEQ9Y223 722 aaKnown RBP8.06□□□□□ -1.12
PFDN5-209ENST00000550069 DEPDC5O75140 1603 aa8.06□□□□□ -1.12
PFDN5-209ENST00000550069 PTPRMP28827 1452 aa8.06□□□□□ -1.12
PFDN5-209ENST00000550069 ZNF644Q9H582 1327 aaPredicted RBP8.05□□□□□ -1.12
PFDN5-209ENST00000550069 PRDM15P57071 1507 aaPredicted RBP8.05□□□□□ -1.12
PFDN5-209ENST00000550069 MADDQ8WXG6 1647 aa8.05□□□□□ -1.12
PFDN5-209ENST00000550069 ACPPP15309 386 aa8.05□□□□□ -1.12
PFDN5-209ENST00000550069 ALAS2P22557 587 aa8.05□□□□□ -1.12
PFDN5-209ENST00000550069 CHRDQ9H2X0 955 aa8.05□□□□□ -1.12
PFDN5-209ENST00000550069 ELP3Q9H9T3 547 aa8.05□□□□□ -1.12
PFDN5-209ENST00000550069 FOXD3Q9UJU5 478 aaPredicted RBP8.05□□□□□ -1.12
PFDN5-209ENST00000550069 KIF15Q9NS87 1388 aa8.05□□□□□ -1.12
PFDN5-209ENST00000550069 ARHGAP31Q2M1Z3 1444 aa8.04□□□□□ -1.12
PFDN5-209ENST00000550069 NID1P14543 1247 aa8.04□□□□□ -1.12
PFDN5-209ENST00000550069 NRLP54845 237 aa8.04□□□□□ -1.12
PFDN5-209ENST00000550069 RASSF7Q02833 373 aa8.04□□□□□ -1.12
PFDN5-209ENST00000550069 KCNMA1Q12791 1236 aa8.04□□□□□ -1.12
PFDN5-209ENST00000550069 GRIK5Q16478 980 aa8.04□□□□□ -1.12
PFDN5-209ENST00000550069 ZNF438Q7Z4V0 828 aa8.04□□□□□ -1.12
PFDN5-209ENST00000550069 GJD3Q8N144 294 aa8.04□□□□□ -1.12
PFDN5-209ENST00000550069 C1orf127Q8N9H9 656 aa8.04□□□□□ -1.12
PFDN5-209ENST00000550069 OR13H1Q8NG92 308 aa8.04□□□□□ -1.12
PFDN5-209ENST00000550069 SCARF2Q96GP6 870 aaPredicted RBP8.04□□□□□ -1.12
PFDN5-209ENST00000550069 EFCC1Q9HA90 598 aa8.04□□□□□ -1.12
PFDN5-209ENST00000550069 FAM13BQ9NYF5 915 aa8.04□□□□□ -1.12
PFDN5-209ENST00000550069 KANK1Q14678 1352 aa8.04□□□□□ -1.12
PFDN5-209ENST00000550069 RIMS1Q86UR5 1692 aaKnown RBP8.04□□□□□ -1.12
PFDN5-209ENST00000550069 PREX1Q8TCU6 1659 aa8.04□□□□□ -1.12
PFDN5-209ENST00000550069 LMTK2Q8IWU2 1503 aa8.03□□□□□ -1.12
PFDN5-209ENST00000550069 RPRD2Q5VT52 1461 aaKnown RBP8.03□□□□□ -1.12
PFDN5-209ENST00000550069 FAM229AH3BQW9 127 aa8.03□□□□□ -1.12
PFDN5-209ENST00000550069 ITGB2P05107 769 aa8.03□□□□□ -1.12
PFDN5-209ENST00000550069 PSAPP07602 524 aa8.03□□□□□ -1.12
PFDN5-209ENST00000550069 ATP11AP98196 1134 aa8.03□□□□□ -1.12
PFDN5-209ENST00000550069 CCER1Q8TC90 406 aaPredicted RBP8.03□□□□□ -1.12
PFDN5-209ENST00000550069 JPH1Q9HDC5 661 aaPredicted RBP8.03□□□□□ -1.12
PFDN5-209ENST00000550069 ABI2Q9NYB9 513 aaPredicted RBP8.03□□□□□ -1.12
PFDN5-209ENST00000550069 MKL2Q9ULH7 1088 aa8.03□□□□□ -1.12
PFDN5-209ENST00000550069 SIGLEC1Q9BZZ2 1709 aa8.03□□□□□ -1.12
PFDN5-209ENST00000550069 C3P01024 1663 aa8.02□□□□□ -1.13
PFDN5-209ENST00000550069 KDM5AP29375 1690 aaKnown RBP8.02□□□□□ -1.13
PFDN5-209ENST00000550069 IGHA2P01877 340 aa8.02□□□□□ -1.13
PFDN5-209ENST00000550069 HOXD8P13378 290 aaPredicted RBP8.02□□□□□ -1.13
PFDN5-209ENST00000550069 EIF2AK2P19525 551 aaKnown RBP8.02□□□□□ -1.13
PFDN5-209ENST00000550069 AFF1P51825 1210 aaKnown RBP8.02□□□□□ -1.13
PFDN5-209ENST00000550069 PDE4CQ08493 712 aa8.02□□□□□ -1.13
PFDN5-209ENST00000550069 ALKBH2Q6NS38 261 aa8.02□□□□□ -1.13
PFDN5-209ENST00000550069 BEND7Q8N7W2 519 aaPredicted RBP8.02□□□□□ -1.13
PFDN5-209ENST00000550069 SMG9Q9H0W8 520 aaKnown RBP8.02□□□□□ -1.13
PFDN5-209ENST00000550069 ANKRD50Q9ULJ7 1429 aa8.02□□□□□ -1.13
PFDN5-209ENST00000550069 VWDEQ8N2E2 1590 aa8.01□□□□□ -1.13
PFDN5-209ENST00000550069 PZPP20742 1482 aa8.01□□□□□ -1.13
PFDN5-209ENST00000550069 LOC102724428A0A0B4J2F2 783 aa8.01□□□□□ -1.13
PFDN5-209ENST00000550069 KIF3BO15066 747 aa8.01□□□□□ -1.13
PFDN5-209ENST00000550069 TRPA1O75762 1119 aa8.01□□□□□ -1.13
PFDN5-209ENST00000550069 SOX18P35713 384 aa8.01□□□□□ -1.13
PFDN5-209ENST00000550069 SIK1P57059 783 aa8.01□□□□□ -1.13
PFDN5-209ENST00000550069 FAM50AQ14320 339 aaKnown RBP8.01□□□□□ -1.13
PFDN5-209ENST00000550069 PDE12Q6L8Q7 609 aaKnown RBP8.01□□□□□ -1.13
PFDN5-209ENST00000550069 KANK3Q6NY19 840 aa8.01□□□□□ -1.13
PFDN5-209ENST00000550069 PODNQ7Z5L7 613 aa8.01□□□□□ -1.13
PFDN5-209ENST00000550069 PLVAPQ9BX97 442 aa8.01□□□□□ -1.13
PFDN5-209ENST00000550069 FNDC3AQ9Y2H6 1198 aaKnown RBP8.01□□□□□ -1.13
PFDN5-209ENST00000550069 GCC2Q8IWJ2 1684 aa8.01□□□□□ -1.13
PFDN5-209ENST00000550069 UNC13BO14795 1591 aa8.01□□□□□ -1.13
PFDN5-209ENST00000550069 ZMYM3Q14202 1370 aa8□□□□□ -1.13
PFDN5-209ENST00000550069 ZNF142P52746 1687 aaPredicted RBP8□□□□□ -1.13
PFDN5-209ENST00000550069 GNB5O14775 395 aa8□□□□□ -1.13
PFDN5-209ENST00000550069 EREGO14944 169 aa8□□□□□ -1.13
PFDN5-209ENST00000550069 TNFRSF21O75509 655 aa8□□□□□ -1.13
PFDN5-209ENST00000550069 XKR5Q6UX68 686 aa8□□□□□ -1.13
PFDN5-209ENST00000550069 HHIPQ96QV1 700 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms