RNA–Protein interactions for RNA: ENST00000549561.6

MRPL42-205, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 3

Gene MRPL42, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-205ENST00000549561 SOX1O00570 391 aaPredicted RBP6.83□□□□□ -1.32
MRPL42-205ENST00000549561 ITPKAP23677 461 aa6.83□□□□□ -1.32
MRPL42-205ENST00000549561 CDC25BP30305 580 aa6.83□□□□□ -1.32
MRPL42-205ENST00000549561 GLIS3Q8NEA6 775 aa6.83□□□□□ -1.32
MRPL42-205ENST00000549561 ASAP3Q8TDY4 903 aa6.83□□□□□ -1.32
MRPL42-205ENST00000549561 EPS8L3Q8TE67 593 aaKnown RBP6.83□□□□□ -1.32
MRPL42-205ENST00000549561 KLHDC7BQ96G42 594 aa6.83□□□□□ -1.32
MRPL42-205ENST00000549561 EHD4Q9H223 541 aa6.83□□□□□ -1.32
MRPL42-205ENST00000549561 SOX17Q9H6I2 414 aaPredicted RBP6.83□□□□□ -1.32
MRPL42-205ENST00000549561 KCNK4Q9NYG8 393 aa6.83□□□□□ -1.32
MRPL42-205ENST00000549561 USP21Q9UK80 565 aa6.83□□□□□ -1.32
MRPL42-205ENST00000549561 F8W735 103 aaPredicted RBP6.82□□□□□ -1.32
MRPL42-205ENST00000549561 ADAM23O75077 832 aa6.82□□□□□ -1.32
MRPL42-205ENST00000549561 ADAM11O75078 769 aa6.82□□□□□ -1.32
MRPL42-205ENST00000549561 ESRRAP11474 423 aaPredicted RBP6.82□□□□□ -1.32
MRPL42-205ENST00000549561 PTPN12Q05209 780 aaKnown RBP6.82□□□□□ -1.32
MRPL42-205ENST00000549561 GRM2Q14416 872 aa6.82□□□□□ -1.32
MRPL42-205ENST00000549561 SPRED3Q2MJR0 410 aa6.82□□□□□ -1.32
MRPL42-205ENST00000549561 FBF1Q8TES7 1133 aa6.82□□□□□ -1.32
MRPL42-205ENST00000549561 WFDC12Q8WWY7 111 aa6.82□□□□□ -1.32
MRPL42-205ENST00000549561 SSBP4Q9BWG4 385 aaPredicted RBP6.82□□□□□ -1.32
MRPL42-205ENST00000549561 ABCB6Q9NP58 842 aa6.82□□□□□ -1.32
MRPL42-205ENST00000549561 NOS3P29474 1203 aa6.81□□□□□ -1.32
MRPL42-205ENST00000549561 C19orf57Q0VDD7 668 aa6.81□□□□□ -1.32
MRPL42-205ENST00000549561 IKBKEQ14164 716 aa6.81□□□□□ -1.32
MRPL42-205ENST00000549561 COL19A1Q14993 1142 aa6.81□□□□□ -1.32
MRPL42-205ENST00000549561 HGSNATQ68CP4 663 aa6.81□□□□□ -1.32
MRPL42-205ENST00000549561 PI16Q6UXB8 463 aa6.81□□□□□ -1.32
MRPL42-205ENST00000549561 DNAJC14Q6Y2X3 702 aaPredicted RBP6.81□□□□□ -1.32
MRPL42-205ENST00000549561 Q6ZS46 218 aa6.81□□□□□ -1.32
MRPL42-205ENST00000549561 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.81□□□□□ -1.32
MRPL42-205ENST00000549561 HOMEZQ8IX15 550 aa6.81□□□□□ -1.32
MRPL42-205ENST00000549561 FOXD4L4Q8WXT5 416 aaPredicted RBP6.81□□□□□ -1.32
MRPL42-205ENST00000549561 CLEC4MQ9H2X3 399 aaPredicted RBP6.81□□□□□ -1.32
MRPL42-205ENST00000549561 TRAK1Q9UPV9 953 aa6.81□□□□□ -1.32
MRPL42-205ENST00000549561 TMEM238LA0A1B0GVL6 79 aa6.8□□□□□ -1.32
MRPL42-205ENST00000549561 DDX3YO15523 660 aaKnown RBP6.8□□□□□ -1.32
MRPL42-205ENST00000549561 GADD45BO75293 160 aaPredicted RBP6.8□□□□□ -1.32
MRPL42-205ENST00000549561 WISP1O95388 367 aa6.8□□□□□ -1.32
MRPL42-205ENST00000549561 P4HBP07237 508 aaKnown RBP6.8□□□□□ -1.32
MRPL42-205ENST00000549561 MAPK8P45983 427 aa6.8□□□□□ -1.32
MRPL42-205ENST00000549561 ZNF423Q2M1K9 1284 aa6.8□□□□□ -1.32
MRPL42-205ENST00000549561 GZF1Q9H116 711 aaPredicted RBP6.8□□□□□ -1.32
MRPL42-205ENST00000549561 ZNF576Q9H609 170 aa6.8□□□□□ -1.32
MRPL42-205ENST00000549561 AKTIPQ9H8T0 292 aa6.8□□□□□ -1.32
MRPL42-205ENST00000549561 NLRP2Q9NX02 1062 aa6.8□□□□□ -1.32
MRPL42-205ENST00000549561 IREB2P48200 963 aaKnown RBP6.79□□□□□ -1.32
MRPL42-205ENST00000549561 ARL4DP49703 201 aa6.79□□□□□ -1.32
MRPL42-205ENST00000549561 PCDH1Q08174 1060 aa6.79□□□□□ -1.32
MRPL42-205ENST00000549561 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.79□□□□□ -1.32
MRPL42-205ENST00000549561 ALG1LQ6GMV1 187 aa6.79□□□□□ -1.32
MRPL42-205ENST00000549561 DZIP1LQ8IYY4 767 aaKnown RBP6.79□□□□□ -1.32
MRPL42-205ENST00000549561 SLC7A3Q8WY07 619 aa6.79□□□□□ -1.32
MRPL42-205ENST00000549561 SETDB2Q96T68 719 aa6.79□□□□□ -1.32
MRPL42-205ENST00000549561 NRSN2Q9GZP1 204 aa6.79□□□□□ -1.32
MRPL42-205ENST00000549561 TPSG1Q9NRR2 321 aa6.79□□□□□ -1.32
MRPL42-205ENST00000549561 ANKRD33BA6NCL7 494 aa6.78□□□□□ -1.32
MRPL42-205ENST00000549561 B3GALT4O96024 378 aa6.78□□□□□ -1.32
MRPL42-205ENST00000549561 DOC2BQ14184 412 aa6.78□□□□□ -1.32
MRPL42-205ENST00000549561 RPS26P11Q5JNZ5 115 aaPredicted RBP6.78□□□□□ -1.32
MRPL42-205ENST00000549561 KIAA1211Q6ZU35 1233 aa6.78□□□□□ -1.32
MRPL42-205ENST00000549561 BCO2Q9BYV7 579 aa6.78□□□□□ -1.32
MRPL42-205ENST00000549561 WWC3Q9ULE0 1092 aa6.78□□□□□ -1.32
MRPL42-205ENST00000549561 EIF4EBP3O60516 100 aaPredicted RBP6.77□□□□□ -1.33
MRPL42-205ENST00000549561 ALX3O95076 343 aa6.77□□□□□ -1.33
MRPL42-205ENST00000549561 DUOXA2Q1HG44 320 aa6.77□□□□□ -1.33
MRPL42-205ENST00000549561 NKAPLQ5M9Q1 402 aa6.77□□□□□ -1.33
MRPL42-205ENST00000549561 ACAD11Q709F0 780 aa6.77□□□□□ -1.33
MRPL42-205ENST00000549561 NPAS4Q8IUM7 802 aa6.77□□□□□ -1.33
MRPL42-205ENST00000549561 AGGF1Q8N302 714 aaeCLIP6.77□□□□□ -1.33
MRPL42-205ENST00000549561 UBASH3BQ8TF42 649 aa6.77□□□□□ -1.33
MRPL42-205ENST00000549561 MEGF10Q96KG7 1140 aa6.77□□□□□ -1.33
MRPL42-205ENST00000549561 K7ELQ4 463 aaPredicted RBP6.76□□□□□ -1.33
MRPL42-205ENST00000549561 XRCC5P13010 732 aaKnown RBP6.76□□□□□ -1.33
MRPL42-205ENST00000549561 NLRP12P59046 1061 aa6.76□□□□□ -1.33
MRPL42-205ENST00000549561 ATP2B2Q01814 1243 aa6.76□□□□□ -1.33
MRPL42-205ENST00000549561 RSPO4Q2I0M5 234 aaPredicted RBP6.76□□□□□ -1.33
MRPL42-205ENST00000549561 NXPE4Q6UWF7 544 aa6.76□□□□□ -1.33
MRPL42-205ENST00000549561 SRCIN1Q9C0H9 1055 aa6.76□□□□□ -1.33
MRPL42-205ENST00000549561 LOC100289279A0A1B0GTE1 492 aa6.75□□□□□ -1.33
MRPL42-205ENST00000549561 MEGF11A6BM72 1044 aa6.75□□□□□ -1.33
MRPL42-205ENST00000549561 GIPC1O14908 333 aa6.75□□□□□ -1.33
MRPL42-205ENST00000549561 LDHBP07195 334 aaKnown RBP6.75□□□□□ -1.33
MRPL42-205ENST00000549561 FURINP09958 794 aa6.75□□□□□ -1.33
MRPL42-205ENST00000549561 FAAP100Q0VG06 881 aa6.75□□□□□ -1.33
MRPL42-205ENST00000549561 CCDC27Q2M243 656 aa6.75□□□□□ -1.33
MRPL42-205ENST00000549561 OSBPL7Q9BZF2 842 aa6.75□□□□□ -1.33
MRPL42-205ENST00000549561 ZFYVE1Q9HBF4 777 aa6.75□□□□□ -1.33
MRPL42-205ENST00000549561 PPP4R2Q9NY27 417 aa6.75□□□□□ -1.33
MRPL42-205ENST00000549561 PRPF40AO75400 957 aaKnown RBP6.74□□□□□ -1.33
MRPL42-205ENST00000549561 H2AFB1P0C5Y9 115 aa6.74□□□□□ -1.33
MRPL42-205ENST00000549561 H2AFB2P0C5Z0 115 aa6.74□□□□□ -1.33
MRPL42-205ENST00000549561 ERCC3P19447 782 aa6.74□□□□□ -1.33
MRPL42-205ENST00000549561 FCGRTP55899 365 aa6.74□□□□□ -1.33
MRPL42-205ENST00000549561 GSTM4Q03013 218 aa6.74□□□□□ -1.33
MRPL42-205ENST00000549561 DTHD1Q6ZMT9 781 aa6.74□□□□□ -1.33
MRPL42-205ENST00000549561 C3orf58Q8NDZ4 430 aa6.74□□□□□ -1.33
MRPL42-205ENST00000549561 UBL7Q96S82 380 aaPredicted RBP6.74□□□□□ -1.33
MRPL42-205ENST00000549561 TRIM56Q9BRZ2 755 aaKnown RBP6.74□□□□□ -1.33
MRPL42-205ENST00000549561 DLGAP3O95886 979 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms