RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 ZSCAN16Q9H4T2 348 aaPredicted RBP21.83■■□□□ 1.09
PRPF40B-208ENST00000548436 ANO8Q9HCE9 1232 aaPredicted RBP21.83■■□□□ 1.09
PRPF40B-208ENST00000548436 PIH1D3Q9NQM4 214 aaKnown RBP21.83■■□□□ 1.09
PRPF40B-208ENST00000548436 FOSBP53539 338 aa21.83■■□□□ 1.08
PRPF40B-208ENST00000548436 THRAP3Q9Y2W1 955 aaKnown RBP21.83■■□□□ 1.08
PRPF40B-208ENST00000548436 RREB1Q92766 1687 aa21.82■■□□□ 1.08
PRPF40B-208ENST00000548436 PPFIA3O75145 1194 aa21.82■■□□□ 1.08
PRPF40B-208ENST00000548436 ARID4AP29374 1257 aaPredicted RBP21.82■■□□□ 1.08
PRPF40B-208ENST00000548436 EVCP57679 992 aa21.82■■□□□ 1.08
PRPF40B-208ENST00000548436 SLC9C2Q5TAH2 1124 aa21.82■■□□□ 1.08
PRPF40B-208ENST00000548436 PGBD1Q96JS3 809 aa21.82■■□□□ 1.08
PRPF40B-208ENST00000548436 FAM177BA6PVY3 158 aa21.81■■□□□ 1.08
PRPF40B-208ENST00000548436 FGFR2P21802 821 aa21.81■■□□□ 1.08
PRPF40B-208ENST00000548436 NAA16Q6N069 864 aaPredicted RBP21.81■■□□□ 1.08
PRPF40B-208ENST00000548436 MB21D2Q8IYB1 491 aaPredicted RBP21.81■■□□□ 1.08
PRPF40B-208ENST00000548436 AK7Q96M32 723 aa21.81■■□□□ 1.08
PRPF40B-208ENST00000548436 LOC102724428A0A0B4J2F2 783 aa21.81■■□□□ 1.08
PRPF40B-208ENST00000548436 SIK1P57059 783 aa21.81■■□□□ 1.08
PRPF40B-208ENST00000548436 ITPK1Q13572 414 aa21.81■■□□□ 1.08
PRPF40B-208ENST00000548436 TTF1Q15361 905 aaPredicted RBP21.81■■□□□ 1.08
PRPF40B-208ENST00000548436 PUM3Q15397 648 aaKnown RBP21.81■■□□□ 1.08
PRPF40B-208ENST00000548436 ZSCAN25Q6NSZ9 544 aa21.81■■□□□ 1.08
PRPF40B-208ENST00000548436 CCDC39Q9UFE4 941 aa21.81■■□□□ 1.08
PRPF40B-208ENST00000548436 USP25Q9UHP3 1055 aa21.81■■□□□ 1.08
PRPF40B-208ENST00000548436 ATRNO75882 1429 aa21.8■■□□□ 1.08
PRPF40B-208ENST00000548436 GOLGA6L4A6NEF3 574 aa21.8■■□□□ 1.08
PRPF40B-208ENST00000548436 ADD1P35611 737 aaKnown RBP21.8■■□□□ 1.08
PRPF40B-208ENST00000548436 LPIN2Q92539 896 aa21.8■■□□□ 1.08
PRPF40B-208ENST00000548436 NUP62CLQ9H1M0 184 aa21.8■■□□□ 1.08
PRPF40B-208ENST00000548436 MROH5Q6ZUA9 1318 aa21.8■■□□□ 1.08
PRPF40B-208ENST00000548436 ZNF213O14771 459 aa21.79■■□□□ 1.08
PRPF40B-208ENST00000548436 PRC1O43663 620 aa21.79■■□□□ 1.08
PRPF40B-208ENST00000548436 IDH1O75874 414 aaKnown RBP21.79■■□□□ 1.08
PRPF40B-208ENST00000548436 CAMTA2O94983 1202 aa21.79■■□□□ 1.08
PRPF40B-208ENST00000548436 ANTXR2P58335 489 aa21.79■■□□□ 1.08
PRPF40B-208ENST00000548436 CAMK4Q16566 473 aa21.79■■□□□ 1.08
PRPF40B-208ENST00000548436 DACT1Q9NYF0 836 aa21.79■■□□□ 1.08
PRPF40B-208ENST00000548436 SNAP23O00161 211 aa21.79■■□□□ 1.08
PRPF40B-208ENST00000548436 MCM5P33992 734 aa21.79■■□□□ 1.08
PRPF40B-208ENST00000548436 UTP14AQ9BVJ6 771 aaKnown RBP21.79■■□□□ 1.08
PRPF40B-208ENST00000548436 NBPF3Q9H094 633 aa21.79■■□□□ 1.08
PRPF40B-208ENST00000548436 SEC31BQ9NQW1 1179 aa21.79■■□□□ 1.08
PRPF40B-208ENST00000548436 ZKSCAN5Q9Y2L8 839 aa21.79■■□□□ 1.08
PRPF40B-208ENST00000548436 FDPSP14324 419 aaKnown RBP21.78■■□□□ 1.08
PRPF40B-208ENST00000548436 UBE3CQ15386 1083 aa21.78■■□□□ 1.08
PRPF40B-208ENST00000548436 NCOA7Q8NI08 942 aa21.78■■□□□ 1.08
PRPF40B-208ENST00000548436 WWC3Q9ULE0 1092 aa21.78■■□□□ 1.08
PRPF40B-208ENST00000548436 KIF3AQ9Y496 699 aa21.78■■□□□ 1.08
PRPF40B-208ENST00000548436 ZNF532Q9HCE3 1301 aa21.78■■□□□ 1.08
PRPF40B-208ENST00000548436 DOCK2Q92608 1830 aa21.78■■□□□ 1.08
PRPF40B-208ENST00000548436 CARMIL3Q8ND23 1372 aa21.78■■□□□ 1.08
PRPF40B-208ENST00000548436 UQCRFS1P1P0C7P4 283 aa21.78■■□□□ 1.08
PRPF40B-208ENST00000548436 MAP3K11Q16584 847 aa21.78■■□□□ 1.08
PRPF40B-208ENST00000548436 CFAP45Q9UL16 551 aa21.78■■□□□ 1.08
PRPF40B-208ENST00000548436 CICQ96RK0 1608 aaPredicted RBP21.77■■□□□ 1.08
PRPF40B-208ENST00000548436 SPATA31A5Q5VU36 1347 aa21.77■■□□□ 1.08
PRPF40B-208ENST00000548436 SPATA31A7Q8IWB4 1347 aa21.77■■□□□ 1.08
PRPF40B-208ENST00000548436 TCRBV5S4A2TA0A5A2 114 aa21.77■■□□□ 1.08
PRPF40B-208ENST00000548436 PDE6AP16499 860 aa21.77■■□□□ 1.08
PRPF40B-208ENST00000548436 NAP1L5Q96NT1 182 aaPredicted RBP21.77■■□□□ 1.08
PRPF40B-208ENST00000548436 NR1I2O75469 434 aa21.76■■□□□ 1.07
PRPF40B-208ENST00000548436 CCDC192P0DO97 292 aa21.76■■□□□ 1.07
PRPF40B-208ENST00000548436 GUCY1B3Q02153 619 aa21.76■■□□□ 1.07
PRPF40B-208ENST00000548436 DENND2AQ9ULE3 1009 aa21.76■■□□□ 1.07
PRPF40B-208ENST00000548436 HPS5Q9UPZ3 1129 aa21.76■■□□□ 1.07
PRPF40B-208ENST00000548436 LAMB2P55268 1798 aa21.76■■□□□ 1.07
PRPF40B-208ENST00000548436 KDM4AO75164 1064 aa21.76■■□□□ 1.07
PRPF40B-208ENST00000548436 ADCY5O95622 1261 aa21.76■■□□□ 1.07
PRPF40B-208ENST00000548436 CEBPZQ03701 1054 aaKnown RBP21.76■■□□□ 1.07
PRPF40B-208ENST00000548436 RALYLQ86SE5 291 aaKnown RBP21.76■■□□□ 1.07
PRPF40B-208ENST00000548436 NKX2-3Q8TAU0 364 aa21.76■■□□□ 1.07
PRPF40B-208ENST00000548436 FTOQ9C0B1 505 aaKnown RBP eCLIP21.76■■□□□ 1.07
PRPF40B-208ENST00000548436 DDX19AQ9NUU7 478 aaKnown RBP21.76■■□□□ 1.07
PRPF40B-208ENST00000548436 KLF18A0A0U1RQI7 1052 aa21.75■■□□□ 1.07
PRPF40B-208ENST00000548436 NUTM2BA6NNL0 878 aaPredicted RBP21.75■■□□□ 1.07
PRPF40B-208ENST00000548436 NUTM2EB1AL46 878 aaPredicted RBP21.75■■□□□ 1.07
PRPF40B-208ENST00000548436 ZNF500O60304 480 aaPredicted RBP21.75■■□□□ 1.07
PRPF40B-208ENST00000548436 NUTM2AQ8IVF1 878 aaPredicted RBP21.75■■□□□ 1.07
PRPF40B-208ENST00000548436 BICD2Q8TD16 824 aa21.75■■□□□ 1.07
PRPF40B-208ENST00000548436 MPHOSPH8Q99549 860 aa21.75■■□□□ 1.07
PRPF40B-208ENST00000548436 TNMDQ9H2S6 317 aa21.75■■□□□ 1.07
PRPF40B-208ENST00000548436 SLC5A1P13866 664 aa21.75■■□□□ 1.07
PRPF40B-208ENST00000548436 PARP10Q53GL7 1025 aa21.75■■□□□ 1.07
PRPF40B-208ENST00000548436 ILDR1Q86SU0 546 aaPredicted RBP21.75■■□□□ 1.07
PRPF40B-208ENST00000548436 TBC1D10CQ8IV04 446 aa21.75■■□□□ 1.07
PRPF40B-208ENST00000548436 CKAP2LQ8IYA6 745 aa21.75■■□□□ 1.07
PRPF40B-208ENST00000548436 SPATA5Q8NB90 893 aa21.75■■□□□ 1.07
PRPF40B-208ENST00000548436 CHMP4CQ96CF2 233 aa21.75■■□□□ 1.07
PRPF40B-208ENST00000548436 CLSTN2Q9H4D0 955 aa21.75■■□□□ 1.07
PRPF40B-208ENST00000548436 C4AP0C0L4 1744 aa21.75■■□□□ 1.07
PRPF40B-208ENST00000548436 C4BP0C0L5 1744 aa21.75■■□□□ 1.07
PRPF40B-208ENST00000548436 NTSR2O95665 410 aa21.74■■□□□ 1.07
PRPF40B-208ENST00000548436 PTMAP06454 111 aaKnown RBP21.74■■□□□ 1.07
PRPF40B-208ENST00000548436 NIP7Q9Y221 180 aaKnown RBP eCLIP21.74■■□□□ 1.07
PRPF40B-208ENST00000548436 MRVI1Q9Y6F6 885 aa21.74■■□□□ 1.07
PRPF40B-208ENST00000548436 COL5A3P25940 1745 aaPredicted RBP21.74■■□□□ 1.07
PRPF40B-208ENST00000548436 WDR19Q8NEZ3 1342 aa21.74■■□□□ 1.07
PRPF40B-208ENST00000548436 GOLGA8BA8MQT2 603 aa21.73■■□□□ 1.07
PRPF40B-208ENST00000548436 TYRO3Q06418 890 aa21.73■■□□□ 1.07
PRPF40B-208ENST00000548436 RASGRF1Q13972 1273 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms