RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 BEND3Q5T5X7 828 aa15.1■□□□□ 0.01
GABPB1-206ENST00000543881 INTS3Q68E01 1043 aaKnown RBP15.1■□□□□ 0.01
GABPB1-206ENST00000543881 SLC10A4Q96EP9 437 aa15.1■□□□□ 0.01
GABPB1-206ENST00000543881 ZBED3Q96IU2 234 aaPredicted RBP15.1■□□□□ 0.01
GABPB1-206ENST00000543881 MYH16Q9H6N6 1097 aa15.1■□□□□ 0.01
GABPB1-206ENST00000543881 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.1■□□□□ 0.01
GABPB1-206ENST00000543881 MKI67P46013 3256 aaKnown RBP15.1■□□□□ 0.01
GABPB1-206ENST00000543881 COL1A1P02452 1464 aaPredicted RBP15.09■□□□□ 0.01
GABPB1-206ENST00000543881 GTF2IP78347 998 aa15.09■□□□□ 0.01
GABPB1-206ENST00000543881 DEFB129Q9H1M3 183 aa15.09■□□□□ 0.01
GABPB1-206ENST00000543881 HTTP42858 3142 aa15.09■□□□□ 0.01
GABPB1-206ENST00000543881 ZNF804BA4D1E1 1349 aa15.09■□□□□ 0.01
GABPB1-206ENST00000543881 ZBTB48P10074 688 aaPredicted RBP15.08■□□□□ 0.01
GABPB1-206ENST00000543881 KLRK1P26718 216 aa15.08■□□□□ 0.01
GABPB1-206ENST00000543881 IGHMBP2P38935 993 aaKnown RBP15.08■□□□□ 0.01
GABPB1-206ENST00000543881 FOXO4P98177 505 aa15.08■□□□□ 0.01
GABPB1-206ENST00000543881 MAP3K11Q16584 847 aa15.08■□□□□ 0.01
GABPB1-206ENST00000543881 RBBP6Q7Z6E9 1792 aaKnown RBP15.08■□□□□ 0
GABPB1-206ENST00000543881 IGF2BP3O00425 579 aaKnown RBP eCLIP15.08■□□□□ 0
GABPB1-206ENST00000543881 WNK4Q96J92 1243 aa15.08■□□□□ 0
GABPB1-206ENST00000543881 CLMNQ96JQ2 1002 aa15.08■□□□□ 0
GABPB1-206ENST00000543881 PTPN22Q9Y2R2 807 aa15.08■□□□□ 0
GABPB1-206ENST00000543881 LAMB1P07942 1786 aa15.07■□□□□ 0
GABPB1-206ENST00000543881 PPP1R12BO60237 982 aaPredicted RBP15.07■□□□□ 0
GABPB1-206ENST00000543881 DLGAP5Q15398 846 aa15.07■□□□□ 0
GABPB1-206ENST00000543881 EPHA10Q5JZY3 1008 aa15.07■□□□□ 0
GABPB1-206ENST00000543881 ERO1AQ96HE7 468 aa15.07■□□□□ 0
GABPB1-206ENST00000543881 ANKRD2Q9GZV1 360 aa15.07■□□□□ 0
GABPB1-206ENST00000543881 SSC5DA1L4H1 1573 aa15.06■□□□□ 0
GABPB1-206ENST00000543881 CD99L2Q8TCZ2 262 aa15.06■□□□□ 0
GABPB1-206ENST00000543881 PPP2R3BQ9Y5P8 575 aa15.06■□□□□ 0
GABPB1-206ENST00000543881 CENPFP49454 3210 aa15.06■□□□□ 0
GABPB1-206ENST00000543881 ECM29Q5VYK3 1845 aa15.06■□□□□ 0
GABPB1-206ENST00000543881 SNAP23O00161 211 aa15.05■□□□□ -0
GABPB1-206ENST00000543881 KCNJ4P48050 445 aa15.05■□□□□ -0
GABPB1-206ENST00000543881 CHRNDQ07001 517 aa15.05■□□□□ -0
GABPB1-206ENST00000543881 CERS5Q8N5B7 392 aa15.05■□□□□ -0
GABPB1-206ENST00000543881 MPHOSPH8Q99549 860 aa15.05■□□□□ -0
GABPB1-206ENST00000543881 CD209Q9NNX6 404 aa15.05■□□□□ -0
GABPB1-206ENST00000543881 KIAA0100Q14667 2235 aaKnown RBP15.05■□□□□ -0
GABPB1-206ENST00000543881 ANKRD18BA2A2Z9 1011 aa15.04■□□□□ -0
GABPB1-206ENST00000543881 UNCXA6NJT0 531 aa15.04■□□□□ -0
GABPB1-206ENST00000543881 GRM8O00222 908 aa15.04■□□□□ -0
GABPB1-206ENST00000543881 EN2P19622 333 aaPredicted RBP15.04■□□□□ -0
GABPB1-206ENST00000543881 CRHR2Q13324 411 aa15.04■□□□□ -0
GABPB1-206ENST00000543881 SUPT20HL1Q3ZLR7 823 aa15.04■□□□□ -0
GABPB1-206ENST00000543881 OTUD7BQ6GQQ9 843 aa15.04■□□□□ -0
GABPB1-206ENST00000543881 MTMR14Q8NCE2 650 aa15.04■□□□□ -0
GABPB1-206ENST00000543881 ARMC5Q96C12 935 aa15.04■□□□□ -0
GABPB1-206ENST00000543881 EFCC1Q9HA90 598 aa15.04■□□□□ -0
GABPB1-206ENST00000543881 PCDHAC2Q9Y5I4 1007 aa15.04■□□□□ -0
GABPB1-206ENST00000543881 IRS2Q9Y4H2 1338 aa15.04■□□□□ -0
GABPB1-206ENST00000543881 CLRN2A0PK11 232 aa15.03■□□□□ -0
GABPB1-206ENST00000543881 MYO1BO43795 1136 aa15.03■□□□□ -0
GABPB1-206ENST00000543881 LMBR1LQ6UX01 489 aa15.03■□□□□ -0
GABPB1-206ENST00000543881 PIAS4Q8N2W9 510 aaPredicted RBP15.03■□□□□ -0
GABPB1-206ENST00000543881 F8W031 263 aaPredicted RBP15.02■□□□□ -0
GABPB1-206ENST00000543881 TAF5LO75529 589 aa15.02■□□□□ -0
GABPB1-206ENST00000543881 GJA5P36382 358 aa15.02■□□□□ -0
GABPB1-206ENST00000543881 IREB2P48200 963 aaKnown RBP15.02■□□□□ -0
GABPB1-206ENST00000543881 SP3Q02447 781 aa15.02■□□□□ -0
GABPB1-206ENST00000543881 IFIT5Q13325 482 aaKnown RBP15.02■□□□□ -0
GABPB1-206ENST00000543881 NBPF12Q5TAG4 269 aaPredicted RBP15.02■□□□□ -0
GABPB1-206ENST00000543881 SLC4A10Q6U841 1118 aa15.02■□□□□ -0
GABPB1-206ENST00000543881 HELBQ8NG08 1087 aaPredicted RBP15.02■□□□□ -0
GABPB1-206ENST00000543881 PTPN18Q99952 460 aa15.02■□□□□ -0
GABPB1-206ENST00000543881 CHMP3Q9Y3E7 222 aa15.02■□□□□ -0
GABPB1-206ENST00000543881 SPDYE2BA6NHP3 402 aa15.01□□□□□ -0.01
GABPB1-206ENST00000543881 USP2O75604 605 aaPredicted RBP15.01□□□□□ -0.01
GABPB1-206ENST00000543881 ALDH1L1O75891 902 aa15.01□□□□□ -0.01
GABPB1-206ENST00000543881 SPDYE6P0CI01 402 aa15.01□□□□□ -0.01
GABPB1-206ENST00000543881 FXR1P51114 621 aaKnown RBP eCLIP15.01□□□□□ -0.01
GABPB1-206ENST00000543881 CFAP100Q494V2 611 aa15.01□□□□□ -0.01
GABPB1-206ENST00000543881 MRPL50Q8N5N7 158 aaKnown RBP15.01□□□□□ -0.01
GABPB1-206ENST00000543881 KAZALD1Q96I82 304 aa15.01□□□□□ -0.01
GABPB1-206ENST00000543881 ZNF594Q96JF6 807 aaPredicted RBP15.01□□□□□ -0.01
GABPB1-206ENST00000543881 PRMT6Q96LA8 375 aaPredicted RBP15.01□□□□□ -0.01
GABPB1-206ENST00000543881 VEZTQ9HBM0 779 aa15.01□□□□□ -0.01
GABPB1-206ENST00000543881 A0A1B0GUL6 1792 aa15.01□□□□□ -0.01
GABPB1-206ENST00000543881 TESPA1A2RU30 521 aaPredicted RBP15.01□□□□□ -0.01
GABPB1-206ENST00000543881 CAP1Q01518 475 aa15.01□□□□□ -0.01
GABPB1-206ENST00000543881 ANKRD13AQ8IZ07 590 aa15.01□□□□□ -0.01
GABPB1-206ENST00000543881 SRCIN1Q9C0H9 1055 aa15.01□□□□□ -0.01
GABPB1-206ENST00000543881 C9orf78Q9NZ63 289 aaPredicted RBP15.01□□□□□ -0.01
GABPB1-206ENST00000543881 BRCA2P51587 3418 aa15□□□□□ -0.01
GABPB1-206ENST00000543881 C15orf52Q6ZUT6 534 aaKnown RBP15□□□□□ -0.01
GABPB1-206ENST00000543881 SUCLG2Q96I99 432 aa15□□□□□ -0.01
GABPB1-206ENST00000543881 TMEM106CQ9BVX2 250 aa15□□□□□ -0.01
GABPB1-206ENST00000543881 AOX1Q06278 1338 aa15□□□□□ -0.01
GABPB1-206ENST00000543881 E9PSI1 815 aa14.99□□□□□ -0.01
GABPB1-206ENST00000543881 NBPF7P0C2Y1 421 aaPredicted RBP14.99□□□□□ -0.01
GABPB1-206ENST00000543881 IL1R1P14778 569 aa14.99□□□□□ -0.01
GABPB1-206ENST00000543881 RBM5P52756 815 aaKnown RBP eCLIP14.99□□□□□ -0.01
GABPB1-206ENST00000543881 FKBP1AP62942 108 aaKnown RBP14.99□□□□□ -0.01
GABPB1-206ENST00000543881 SLFN5Q08AF3 891 aa14.99□□□□□ -0.01
GABPB1-206ENST00000543881 RASA3Q14644 834 aa14.99□□□□□ -0.01
GABPB1-206ENST00000543881 CCDC57Q2TAC2 916 aa14.99□□□□□ -0.01
GABPB1-206ENST00000543881 OPTNQ96CV9 577 aa14.99□□□□□ -0.01
GABPB1-206ENST00000543881 CDCA7LQ96GN5 454 aa14.99□□□□□ -0.01
GABPB1-206ENST00000543881 ZNF333Q96JL9 665 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms