RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 MYO3BQ8WXR4 1341 aa21.03■□□□□ 0.96
RABGGTA-203ENST00000543002 SEMA3EO15041 775 aa21.03■□□□□ 0.96
RABGGTA-203ENST00000543002 LMOD1P29536 600 aaPredicted RBP21.03■□□□□ 0.96
RABGGTA-203ENST00000543002 FKBP1AP62942 108 aaKnown RBP21.03■□□□□ 0.96
RABGGTA-203ENST00000543002 GMLQ99445 158 aa21.03■□□□□ 0.96
RABGGTA-203ENST00000543002 MXD3Q9BW11 206 aa21.03■□□□□ 0.96
RABGGTA-203ENST00000543002 CCDC8Q9H0W5 538 aaPredicted RBP21.03■□□□□ 0.96
RABGGTA-203ENST00000543002 GPRC5DQ9NZD1 345 aa21.03■□□□□ 0.96
RABGGTA-203ENST00000543002 HACL1Q9UJ83 578 aa21.03■□□□□ 0.96
RABGGTA-203ENST00000543002 DBNLQ9UJU6 430 aaKnown RBP21.03■□□□□ 0.96
RABGGTA-203ENST00000543002 ZNF646O15015 1829 aaPredicted RBP21.02■□□□□ 0.96
RABGGTA-203ENST00000543002 GCC1Q96CN9 775 aa21.02■□□□□ 0.95
RABGGTA-203ENST00000543002 JAG2Q9Y219 1238 aa21.02■□□□□ 0.95
RABGGTA-203ENST00000543002 SCN4AP35499 1836 aa21.01■□□□□ 0.95
RABGGTA-203ENST00000543002 IGHDP01880 384 aa21.01■□□□□ 0.95
RABGGTA-203ENST00000543002 EPS15P42566 896 aa21.01■□□□□ 0.95
RABGGTA-203ENST00000543002 CHAF1AQ13111 956 aaPredicted RBP21.01■□□□□ 0.95
RABGGTA-203ENST00000543002 CCDC158Q5M9N0 1113 aa21.01■□□□□ 0.95
RABGGTA-203ENST00000543002 TLR7Q9NYK1 1049 aaKnown RBP21.01■□□□□ 0.95
RABGGTA-203ENST00000543002 CNOT7Q9UIV1 285 aaKnown RBP21.01■□□□□ 0.95
RABGGTA-203ENST00000543002 DENND2AQ9ULE3 1009 aa21.01■□□□□ 0.95
RABGGTA-203ENST00000543002 KIF3CO14782 793 aa21■□□□□ 0.95
RABGGTA-203ENST00000543002 SMARCA5O60264 1052 aaPredicted RBP21■□□□□ 0.95
RABGGTA-203ENST00000543002 ARID4AP29374 1257 aaPredicted RBP21■□□□□ 0.95
RABGGTA-203ENST00000543002 CERS5Q8N5B7 392 aa21■□□□□ 0.95
RABGGTA-203ENST00000543002 TBC1D22AQ8WUA7 517 aa21■□□□□ 0.95
RABGGTA-203ENST00000543002 TAF1DQ9H5J8 278 aaPredicted RBP21■□□□□ 0.95
RABGGTA-203ENST00000543002 NEFLP07196 543 aa20.99■□□□□ 0.95
RABGGTA-203ENST00000543002 IFIT2P09913 472 aaKnown RBP20.99■□□□□ 0.95
RABGGTA-203ENST00000543002 UQCRFS1P1P0C7P4 283 aa20.99■□□□□ 0.95
RABGGTA-203ENST00000543002 EPHX2P34913 555 aa20.99■□□□□ 0.95
RABGGTA-203ENST00000543002 RASGRF1Q13972 1273 aa20.99■□□□□ 0.95
RABGGTA-203ENST00000543002 MFSD14BQ5SR56 506 aa20.99■□□□□ 0.95
RABGGTA-203ENST00000543002 TTC39AQ5SRH9 613 aa20.99■□□□□ 0.95
RABGGTA-203ENST00000543002 MICALL2Q8IY33 904 aa20.99■□□□□ 0.95
RABGGTA-203ENST00000543002 WDR66Q8TBY9 1149 aa20.99■□□□□ 0.95
RABGGTA-203ENST00000543002 ZNF512BQ96KM6 892 aaPredicted RBP20.99■□□□□ 0.95
RABGGTA-203ENST00000543002 COL1A1P02452 1464 aaPredicted RBP20.99■□□□□ 0.95
RABGGTA-203ENST00000543002 PDS5AQ29RF7 1337 aaKnown RBP20.98■□□□□ 0.95
RABGGTA-203ENST00000543002 H7C1D1 291 aa20.98■□□□□ 0.95
RABGGTA-203ENST00000543002 USP17L8P0C7I0 530 aa20.98■□□□□ 0.95
RABGGTA-203ENST00000543002 SMC5Q8IY18 1101 aa20.98■□□□□ 0.95
RABGGTA-203ENST00000543002 SHTN1A0MZ66 631 aa20.97■□□□□ 0.95
RABGGTA-203ENST00000543002 MMP14P50281 582 aa20.97■□□□□ 0.95
RABGGTA-203ENST00000543002 ZNF280AP59817 542 aaPredicted RBP20.97■□□□□ 0.95
RABGGTA-203ENST00000543002 BCL11AQ9H165 835 aa20.97■□□□□ 0.95
RABGGTA-203ENST00000543002 ADARB2Q9NS39 739 aaKnown RBP20.97■□□□□ 0.95
RABGGTA-203ENST00000543002 MYH13Q9UKX3 1938 aa20.96■□□□□ 0.95
RABGGTA-203ENST00000543002 KIAA0825Q8IV33 1275 aa20.96■□□□□ 0.95
RABGGTA-203ENST00000543002 HMG20BQ9P0W2 317 aa20.96■□□□□ 0.95
RABGGTA-203ENST00000543002 MCAMP43121 646 aa20.95■□□□□ 0.94
RABGGTA-203ENST00000543002 SCARF1Q14162 830 aa20.95■□□□□ 0.94
RABGGTA-203ENST00000543002 ANKRD45Q5TZF3 282 aa20.95■□□□□ 0.94
RABGGTA-203ENST00000543002 USP50Q70EL3 339 aaPredicted RBP20.95■□□□□ 0.94
RABGGTA-203ENST00000543002 PNMA8AQ86V59 439 aaPredicted RBP20.95■□□□□ 0.94
RABGGTA-203ENST00000543002 OGFOD1Q8N543 542 aa20.95■□□□□ 0.94
RABGGTA-203ENST00000543002 SPATA5Q8NB90 893 aa20.95■□□□□ 0.94
RABGGTA-203ENST00000543002 SUGT1Q9Y2Z0 365 aa20.95■□□□□ 0.94
RABGGTA-203ENST00000543002 SALL1Q9NSC2 1324 aa20.95■□□□□ 0.94
RABGGTA-203ENST00000543002 C16orf71Q8IYS4 520 aaPredicted RBP20.94■□□□□ 0.94
RABGGTA-203ENST00000543002 ZBTB47Q9UFB7 747 aaPredicted RBP20.94■□□□□ 0.94
RABGGTA-203ENST00000543002 HDAC9Q9UKV0 1011 aa20.94■□□□□ 0.94
RABGGTA-203ENST00000543002 F8W031 263 aaPredicted RBP20.93■□□□□ 0.94
RABGGTA-203ENST00000543002 GRIK5Q16478 980 aa20.93■□□□□ 0.94
RABGGTA-203ENST00000543002 PI16Q6UXB8 463 aa20.93■□□□□ 0.94
RABGGTA-203ENST00000543002 SAMD7Q7Z3H4 446 aa20.93■□□□□ 0.94
RABGGTA-203ENST00000543002 ZGPATQ8N5A5 531 aaKnown RBP20.93■□□□□ 0.94
RABGGTA-203ENST00000543002 TBC1D10BQ4KMP7 808 aaPredicted RBP20.92■□□□□ 0.94
RABGGTA-203ENST00000543002 EAPPQ56P03 285 aaPredicted RBP20.92■□□□□ 0.94
RABGGTA-203ENST00000543002 TRPM4Q8TD43 1214 aa20.92■□□□□ 0.94
RABGGTA-203ENST00000543002 MYOZ2Q9NPC6 264 aa20.92■□□□□ 0.94
RABGGTA-203ENST00000543002 TTF2Q9UNY4 1162 aaKnown RBP20.92■□□□□ 0.94
RABGGTA-203ENST00000543002 EGFRP00533 1210 aa20.91■□□□□ 0.94
RABGGTA-203ENST00000543002 HIRAP54198 1017 aaPredicted RBP20.91■□□□□ 0.94
RABGGTA-203ENST00000543002 KIF4BQ2VIQ3 1234 aa20.91■□□□□ 0.94
RABGGTA-203ENST00000543002 RBM26Q5T8P6 1007 aaKnown RBP20.91■□□□□ 0.94
RABGGTA-203ENST00000543002 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.91■□□□□ 0.94
RABGGTA-203ENST00000543002 SNRKQ9NRH2 765 aa20.91■□□□□ 0.94
RABGGTA-203ENST00000543002 TOMM70O94826 608 aa20.9■□□□□ 0.94
RABGGTA-203ENST00000543002 POTEIP0CG38 1075 aa20.9■□□□□ 0.94
RABGGTA-203ENST00000543002 POTEJP0CG39 1038 aa20.9■□□□□ 0.94
RABGGTA-203ENST00000543002 PRDX5P30044 214 aa20.9■□□□□ 0.94
RABGGTA-203ENST00000543002 B4GALNT3Q6L9W6 998 aa20.9■□□□□ 0.94
RABGGTA-203ENST00000543002 LDHDQ86WU2 507 aa20.9■□□□□ 0.94
RABGGTA-203ENST00000543002 AKAP11Q9UKA4 1901 aa20.9■□□□□ 0.94
RABGGTA-203ENST00000543002 LDHBP07195 334 aaKnown RBP20.89■□□□□ 0.93
RABGGTA-203ENST00000543002 ATP5JP18859 108 aa20.89■□□□□ 0.93
RABGGTA-203ENST00000543002 ZAP70P43403 619 aa20.89■□□□□ 0.93
RABGGTA-203ENST00000543002 HDLBPQ00341 1268 aaKnown RBP20.89■□□□□ 0.93
RABGGTA-203ENST00000543002 NUCB1Q02818 461 aa20.89■□□□□ 0.93
RABGGTA-203ENST00000543002 SPTY2D1Q68D10 685 aaPredicted RBP20.89■□□□□ 0.93
RABGGTA-203ENST00000543002 ECHDC1Q9NTX5 307 aa20.89■□□□□ 0.93
RABGGTA-203ENST00000543002 ABCF2Q9UG63 623 aa20.89■□□□□ 0.93
RABGGTA-203ENST00000543002 MAST3O60307 1309 aa20.89■□□□□ 0.93
RABGGTA-203ENST00000543002 ADAMTSL1Q8N6G6 1762 aa20.88■□□□□ 0.93
RABGGTA-203ENST00000543002 CYP2E1P05181 493 aaPredicted RBP20.88■□□□□ 0.93
RABGGTA-203ENST00000543002 TBC1D9Q6ZT07 1266 aa20.88■□□□□ 0.93
RABGGTA-203ENST00000543002 CHD1LQ86WJ1 897 aa20.88■□□□□ 0.93
RABGGTA-203ENST00000543002 MTMR14Q8NCE2 650 aa20.88■□□□□ 0.93
RABGGTA-203ENST00000543002 RBM46Q8TBY0 533 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms