RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 CHAF1AQ13111 956 aaPredicted RBP19.02■□□□□ 0.64
DDB1-218ENST00000540784 AGBL3Q8NEM8 1001 aa19.02■□□□□ 0.64
DDB1-218ENST00000540784 MXD3Q9BW11 206 aa19.02■□□□□ 0.64
DDB1-218ENST00000540784 NMRK2Q9NPI5 230 aa19.02■□□□□ 0.64
DDB1-218ENST00000540784 CNOT7Q9UIV1 285 aaKnown RBP19.02■□□□□ 0.64
DDB1-218ENST00000540784 DENND2AQ9ULE3 1009 aa19.02■□□□□ 0.64
DDB1-218ENST00000540784 JAG2Q9Y219 1238 aa19.02■□□□□ 0.64
DDB1-218ENST00000540784 TIAM2Q8IVF5 1701 aa19.02■□□□□ 0.63
DDB1-218ENST00000540784 ZNF609O15014 1411 aa19.01■□□□□ 0.63
DDB1-218ENST00000540784 POTECB2RU33 542 aa19.01■□□□□ 0.63
DDB1-218ENST00000540784 H7C1D1 291 aa19.01■□□□□ 0.63
DDB1-218ENST00000540784 UQCRFS1P1P0C7P4 283 aa19.01■□□□□ 0.63
DDB1-218ENST00000540784 FKBP1AP62942 108 aaKnown RBP19.01■□□□□ 0.63
DDB1-218ENST00000540784 TTC39AQ5SRH9 613 aa19.01■□□□□ 0.63
DDB1-218ENST00000540784 ANKRD45Q5TZF3 282 aa19.01■□□□□ 0.63
DDB1-218ENST00000540784 GPRC5DQ9NZD1 345 aa19.01■□□□□ 0.63
DDB1-218ENST00000540784 HACL1Q9UJ83 578 aa19.01■□□□□ 0.63
DDB1-218ENST00000540784 DBNLQ9UJU6 430 aaKnown RBP19.01■□□□□ 0.63
DDB1-218ENST00000540784 MYO3BQ8WXR4 1341 aa19■□□□□ 0.63
DDB1-218ENST00000540784 SCNN1DP51172 638 aa19■□□□□ 0.63
DDB1-218ENST00000540784 TBC1D22AQ8WUA7 517 aa19■□□□□ 0.63
DDB1-218ENST00000540784 GMLQ99445 158 aa19■□□□□ 0.63
DDB1-218ENST00000540784 ZBTB22O15209 634 aa18.99■□□□□ 0.63
DDB1-218ENST00000540784 USP17L8P0C7I0 530 aa18.99■□□□□ 0.63
DDB1-218ENST00000540784 EPS15P42566 896 aa18.99■□□□□ 0.63
DDB1-218ENST00000540784 MFSD14BQ5SR56 506 aa18.99■□□□□ 0.63
DDB1-218ENST00000540784 OGFOD1Q8N543 542 aa18.99■□□□□ 0.63
DDB1-218ENST00000540784 WDR66Q8TBY9 1149 aa18.99■□□□□ 0.63
DDB1-218ENST00000540784 TLR7Q9NYK1 1049 aaKnown RBP18.99■□□□□ 0.63
DDB1-218ENST00000540784 EPHX2P34913 555 aa18.98■□□□□ 0.63
DDB1-218ENST00000540784 SMC5Q8IY18 1101 aa18.98■□□□□ 0.63
DDB1-218ENST00000540784 MICALL2Q8IY33 904 aa18.98■□□□□ 0.63
DDB1-218ENST00000540784 ZNF512BQ96KM6 892 aaPredicted RBP18.98■□□□□ 0.63
DDB1-218ENST00000540784 TAF1DQ9H5J8 278 aaPredicted RBP18.98■□□□□ 0.63
DDB1-218ENST00000540784 ARID4AP29374 1257 aaPredicted RBP18.97■□□□□ 0.63
DDB1-218ENST00000540784 MMP14P50281 582 aa18.97■□□□□ 0.63
DDB1-218ENST00000540784 RASGRF1Q13972 1273 aa18.97■□□□□ 0.63
DDB1-218ENST00000540784 B4GALNT3Q6L9W6 998 aa18.97■□□□□ 0.63
DDB1-218ENST00000540784 KIAA0825Q8IV33 1275 aa18.97■□□□□ 0.63
DDB1-218ENST00000540784 C16orf71Q8IYS4 520 aaPredicted RBP18.97■□□□□ 0.63
DDB1-218ENST00000540784 CERS5Q8N5B7 392 aa18.97■□□□□ 0.63
DDB1-218ENST00000540784 SPATA5Q8NB90 893 aa18.97■□□□□ 0.63
DDB1-218ENST00000540784 ADARB2Q9NS39 739 aaKnown RBP18.97■□□□□ 0.63
DDB1-218ENST00000540784 HMG20BQ9P0W2 317 aa18.97■□□□□ 0.63
DDB1-218ENST00000540784 HDAC9Q9UKV0 1011 aa18.97■□□□□ 0.63
DDB1-218ENST00000540784 PNMA8AQ86V59 439 aaPredicted RBP18.96■□□□□ 0.63
DDB1-218ENST00000540784 SCN9AQ15858 1988 aa18.95■□□□□ 0.62
DDB1-218ENST00000540784 SHTN1A0MZ66 631 aa18.95■□□□□ 0.62
DDB1-218ENST00000540784 F8W031 263 aaPredicted RBP18.95■□□□□ 0.62
DDB1-218ENST00000540784 ZNF280AP59817 542 aaPredicted RBP18.95■□□□□ 0.62
DDB1-218ENST00000540784 SCARF1Q14162 830 aa18.95■□□□□ 0.62
DDB1-218ENST00000540784 RBM26Q5T8P6 1007 aaKnown RBP18.95■□□□□ 0.62
DDB1-218ENST00000540784 USP50Q70EL3 339 aaPredicted RBP18.95■□□□□ 0.62
DDB1-218ENST00000540784 ZGPATQ8N5A5 531 aaKnown RBP18.95■□□□□ 0.62
DDB1-218ENST00000540784 SNRKQ9NRH2 765 aa18.95■□□□□ 0.62
DDB1-218ENST00000540784 SUGT1Q9Y2Z0 365 aa18.95■□□□□ 0.62
DDB1-218ENST00000540784 PDS5AQ29RF7 1337 aaKnown RBP18.95■□□□□ 0.62
DDB1-218ENST00000540784 KIF3CO14782 793 aa18.94■□□□□ 0.62
DDB1-218ENST00000540784 MCAMP43121 646 aa18.94■□□□□ 0.62
DDB1-218ENST00000540784 EAPPQ56P03 285 aaPredicted RBP18.94■□□□□ 0.62
DDB1-218ENST00000540784 SAMD7Q7Z3H4 446 aa18.94■□□□□ 0.62
DDB1-218ENST00000540784 TTF2Q9UNY4 1162 aaKnown RBP18.94■□□□□ 0.62
DDB1-218ENST00000540784 WDR90Q96KV7 1748 aa18.94■□□□□ 0.62
DDB1-218ENST00000540784 TBC1D10BQ4KMP7 808 aaPredicted RBP18.93■□□□□ 0.62
DDB1-218ENST00000540784 SPTY2D1Q68D10 685 aaPredicted RBP18.93■□□□□ 0.62
DDB1-218ENST00000540784 GPATCH3Q96I76 525 aa18.93■□□□□ 0.62
DDB1-218ENST00000540784 MYOZ2Q9NPC6 264 aa18.93■□□□□ 0.62
DDB1-218ENST00000540784 ECHDC1Q9NTX5 307 aa18.93■□□□□ 0.62
DDB1-218ENST00000540784 ABCF2Q9UG63 623 aa18.93■□□□□ 0.62
DDB1-218ENST00000540784 CLEC11AQ9Y240 323 aa18.93■□□□□ 0.62
DDB1-218ENST00000540784 SALL1Q9NSC2 1324 aa18.93■□□□□ 0.62
DDB1-218ENST00000540784 LDHBP07195 334 aaKnown RBP18.92■□□□□ 0.62
DDB1-218ENST00000540784 ATP5JP18859 108 aa18.92■□□□□ 0.62
DDB1-218ENST00000540784 NUCB1Q02818 461 aa18.92■□□□□ 0.62
DDB1-218ENST00000540784 GRIK5Q16478 980 aa18.92■□□□□ 0.62
DDB1-218ENST00000540784 ERICH6BQ5W0A0 696 aa18.92■□□□□ 0.62
DDB1-218ENST00000540784 PI16Q6UXB8 463 aa18.92■□□□□ 0.62
DDB1-218ENST00000540784 CHD1LQ86WJ1 897 aa18.92■□□□□ 0.62
DDB1-218ENST00000540784 LNPKQ9C0E8 428 aa18.92■□□□□ 0.62
DDB1-218ENST00000540784 ZAP70P43403 619 aa18.91■□□□□ 0.62
DDB1-218ENST00000540784 TBC1D9Q6ZT07 1266 aa18.91■□□□□ 0.62
DDB1-218ENST00000540784 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.91■□□□□ 0.62
DDB1-218ENST00000540784 ARAP2Q8WZ64 1704 aa18.91■□□□□ 0.62
DDB1-218ENST00000540784 RBM5P52756 815 aaKnown RBP eCLIP18.9■□□□□ 0.62
DDB1-218ENST00000540784 HIRAP54198 1017 aaPredicted RBP18.9■□□□□ 0.62
DDB1-218ENST00000540784 DLGAP5Q15398 846 aa18.9■□□□□ 0.62
DDB1-218ENST00000540784 KIF4BQ2VIQ3 1234 aa18.9■□□□□ 0.62
DDB1-218ENST00000540784 ERICH6Q7L0X2 663 aa18.9■□□□□ 0.62
DDB1-218ENST00000540784 CCDC136Q96JN2 1154 aa18.9■□□□□ 0.62
DDB1-218ENST00000540784 MRIQ9BWK5 157 aa18.9■□□□□ 0.62
DDB1-218ENST00000540784 BOLA2Q9H3K6 86 aa18.9■□□□□ 0.62
DDB1-218ENST00000540784 LRP2BPQ9P2M1 347 aa18.9■□□□□ 0.62
DDB1-218ENST00000540784 COL1A1P02452 1464 aaPredicted RBP18.9■□□□□ 0.62
DDB1-218ENST00000540784 TOMM70O94826 608 aa18.89■□□□□ 0.61
DDB1-218ENST00000540784 EGFRP00533 1210 aa18.89■□□□□ 0.61
DDB1-218ENST00000540784 CYP2E1P05181 493 aaPredicted RBP18.89■□□□□ 0.61
DDB1-218ENST00000540784 HDLBPQ00341 1268 aaKnown RBP18.89■□□□□ 0.61
DDB1-218ENST00000540784 CFAP100Q494V2 611 aa18.89■□□□□ 0.61
DDB1-218ENST00000540784 LDHDQ86WU2 507 aa18.89■□□□□ 0.61
DDB1-218ENST00000540784 TRPM4Q8TD43 1214 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms