RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 ZNF521Q96K83 1311 aa17.88■□□□□ 0.45
SNHG1-213ENST00000540725 PDE4DIPQ5VU43 2346 aa17.88■□□□□ 0.45
SNHG1-213ENST00000540725 PLIN1O60240 522 aa17.88■□□□□ 0.45
SNHG1-213ENST00000540725 DLGAP5Q15398 846 aa17.88■□□□□ 0.45
SNHG1-213ENST00000540725 RGS19P49795 217 aa17.87■□□□□ 0.45
SNHG1-213ENST00000540725 MTMR14Q8NCE2 650 aa17.87■□□□□ 0.45
SNHG1-213ENST00000540725 ARAP2Q8WZ64 1704 aa17.87■□□□□ 0.45
SNHG1-213ENST00000540725 F8W031 263 aaPredicted RBP17.86■□□□□ 0.45
SNHG1-213ENST00000540725 FKBP1AP62942 108 aaKnown RBP17.86■□□□□ 0.45
SNHG1-213ENST00000540725 PRKG1Q13976 671 aa17.86■□□□□ 0.45
SNHG1-213ENST00000540725 ARMC9Q7Z3E5 817 aa17.86■□□□□ 0.45
SNHG1-213ENST00000540725 SUCLG2Q96I99 432 aa17.86■□□□□ 0.45
SNHG1-213ENST00000540725 JAG2Q9Y219 1238 aa17.86■□□□□ 0.45
SNHG1-213ENST00000540725 MLLT1Q03111 559 aaPredicted RBP17.85■□□□□ 0.45
SNHG1-213ENST00000540725 PTPN12Q05209 780 aaKnown RBP17.85■□□□□ 0.45
SNHG1-213ENST00000540725 KAZALD1Q96I82 304 aa17.85■□□□□ 0.45
SNHG1-213ENST00000540725 DEFB129Q9H1M3 183 aa17.85■□□□□ 0.45
SNHG1-213ENST00000540725 PCDHAC2Q9Y5I4 1007 aa17.85■□□□□ 0.45
SNHG1-213ENST00000540725 NBPF7P0C2Y1 421 aaPredicted RBP17.84■□□□□ 0.45
SNHG1-213ENST00000540725 MKRN3Q13064 507 aaKnown RBP17.84■□□□□ 0.45
SNHG1-213ENST00000540725 CFAP100Q494V2 611 aa17.84■□□□□ 0.45
SNHG1-213ENST00000540725 SPDYE2BA6NHP3 402 aa17.83■□□□□ 0.45
SNHG1-213ENST00000540725 SPDYE6P0CI01 402 aa17.83■□□□□ 0.45
SNHG1-213ENST00000540725 UBE4AQ14139 1066 aa17.83■□□□□ 0.45
SNHG1-213ENST00000540725 LDLRAD1Q5T700 205 aa17.83■□□□□ 0.45
SNHG1-213ENST00000540725 CTU1Q7Z7A3 348 aaKnown RBP17.83■□□□□ 0.45
SNHG1-213ENST00000540725 PUS3Q9BZE2 481 aaKnown RBP17.83■□□□□ 0.45
SNHG1-213ENST00000540725 ANGEL1Q9UNK9 670 aaKnown RBP17.83■□□□□ 0.45
SNHG1-213ENST00000540725 LAMB1P07942 1786 aa17.83■□□□□ 0.44
SNHG1-213ENST00000540725 SSC5DA1L4H1 1573 aa17.83■□□□□ 0.44
SNHG1-213ENST00000540725 UTYO14607 1347 aa17.83■□□□□ 0.44
SNHG1-213ENST00000540725 FAM205AQ6ZU69 1335 aa17.83■□□□□ 0.44
SNHG1-213ENST00000540725 CLRN2A0PK11 232 aa17.82■□□□□ 0.44
SNHG1-213ENST00000540725 MYO1BO43795 1136 aa17.82■□□□□ 0.44
SNHG1-213ENST00000540725 TM4SF4P48230 202 aa17.82■□□□□ 0.44
SNHG1-213ENST00000540725 MRPL50Q8N5N7 158 aaKnown RBP17.82■□□□□ 0.44
SNHG1-213ENST00000540725 FZD1Q9UP38 647 aa17.82■□□□□ 0.44
SNHG1-213ENST00000540725 PPP2R3BQ9Y5P8 575 aa17.82■□□□□ 0.44
SNHG1-213ENST00000540725 TBC1D8O95759 1140 aa17.81■□□□□ 0.44
SNHG1-213ENST00000540725 GYG1P46976 350 aa17.81■□□□□ 0.44
SNHG1-213ENST00000540725 SREBF2Q12772 1141 aa17.81■□□□□ 0.44
SNHG1-213ENST00000540725 TDRD7Q8NHU6 1098 aaKnown RBP17.81■□□□□ 0.44
SNHG1-213ENST00000540725 PRMT6Q96LA8 375 aaPredicted RBP17.81■□□□□ 0.44
SNHG1-213ENST00000540725 BICC1Q9H694 974 aaKnown RBP17.81■□□□□ 0.44
SNHG1-213ENST00000540725 VEZTQ9HBM0 779 aa17.81■□□□□ 0.44
SNHG1-213ENST00000540725 AOX1Q06278 1338 aa17.81■□□□□ 0.44
SNHG1-213ENST00000540725 TNRC18O15417 2968 aaPredicted RBP17.8■□□□□ 0.44
SNHG1-213ENST00000540725 HIBADHP31937 336 aaKnown RBP17.8■□□□□ 0.44
SNHG1-213ENST00000540725 RBM5P52756 815 aaKnown RBP eCLIP17.8■□□□□ 0.44
SNHG1-213ENST00000540725 RABL6Q3YEC7 729 aaPredicted RBP17.8■□□□□ 0.44
SNHG1-213ENST00000540725 MFSD14BQ5SR56 506 aa17.8■□□□□ 0.44
SNHG1-213ENST00000540725 SPRYD7Q5W111 196 aa17.8■□□□□ 0.44
SNHG1-213ENST00000540725 FAM84BQ96KN1 310 aaPredicted RBP17.8■□□□□ 0.44
SNHG1-213ENST00000540725 RIPOR2Q9Y4F9 1068 aa17.8■□□□□ 0.44
SNHG1-213ENST00000540725 PTPRCP08575 1304 aa17.8■□□□□ 0.44
SNHG1-213ENST00000540725 MROH5Q6ZUA9 1318 aa17.8■□□□□ 0.44
SNHG1-213ENST00000540725 OTOFQ9HC10 1997 aa17.8■□□□□ 0.44
SNHG1-213ENST00000540725 E9PSI1 815 aa17.79■□□□□ 0.44
SNHG1-213ENST00000540725 PPP1R12BO60237 982 aaPredicted RBP17.79■□□□□ 0.44
SNHG1-213ENST00000540725 MAP3K11Q16584 847 aa17.79■□□□□ 0.44
SNHG1-213ENST00000540725 ANKRD44Q8N8A2 993 aa17.79■□□□□ 0.44
SNHG1-213ENST00000540725 ZNF296Q8WUU4 475 aaPredicted RBP17.79■□□□□ 0.44
SNHG1-213ENST00000540725 MYH13Q9UKX3 1938 aa17.79■□□□□ 0.44
SNHG1-213ENST00000540725 SUPT20HL1Q3ZLR7 823 aa17.79■□□□□ 0.44
SNHG1-213ENST00000540725 SSH1Q8WYL5 1049 aa17.79■□□□□ 0.44
SNHG1-213ENST00000540725 SLC10A4Q96EP9 437 aa17.79■□□□□ 0.44
SNHG1-213ENST00000540725 TTF2Q9UNY4 1162 aaKnown RBP17.79■□□□□ 0.44
SNHG1-213ENST00000540725 LRRC24Q50LG9 513 aa17.78■□□□□ 0.44
SNHG1-213ENST00000540725 NBPF12Q5TAG4 269 aaPredicted RBP17.78■□□□□ 0.44
SNHG1-213ENST00000540725 CLMNQ96JQ2 1002 aa17.78■□□□□ 0.44
SNHG1-213ENST00000540725 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.78■□□□□ 0.44
SNHG1-213ENST00000540725 GPR25O00155 361 aa17.77■□□□□ 0.43
SNHG1-213ENST00000540725 RASA3Q14644 834 aa17.77■□□□□ 0.43
SNHG1-213ENST00000540725 NOM1Q5C9Z4 860 aaKnown RBP17.77■□□□□ 0.43
SNHG1-213ENST00000540725 METTL24Q5JXM2 366 aa17.77■□□□□ 0.43
SNHG1-213ENST00000540725 CFHR5Q9BXR6 569 aa17.77■□□□□ 0.43
SNHG1-213ENST00000540725 SERPINA10Q9UK55 444 aa17.77■□□□□ 0.43
SNHG1-213ENST00000540725 MANSC4A6NHS7 340 aaPredicted RBP17.76■□□□□ 0.43
SNHG1-213ENST00000540725 SOX10P56693 466 aa17.76■□□□□ 0.43
SNHG1-213ENST00000540725 SLFN5Q08AF3 891 aa17.76■□□□□ 0.43
SNHG1-213ENST00000540725 TNFAIP1Q13829 316 aa17.76■□□□□ 0.43
SNHG1-213ENST00000540725 SPDYE2Q495Y8 402 aa17.76■□□□□ 0.43
SNHG1-213ENST00000540725 FBXO33Q7Z6M2 555 aa17.76■□□□□ 0.43
SNHG1-213ENST00000540725 VPS37DQ86XT2 251 aa17.76■□□□□ 0.43
SNHG1-213ENST00000540725 WNK4Q96J92 1243 aa17.76■□□□□ 0.43
SNHG1-213ENST00000540725 ZNF70Q9UC06 446 aaPredicted RBP17.76■□□□□ 0.43
SNHG1-213ENST00000540725 IQSEC3Q9UPP2 1182 aaPredicted RBP17.76■□□□□ 0.43
SNHG1-213ENST00000540725 UNCXA6NJT0 531 aa17.75■□□□□ 0.43
SNHG1-213ENST00000540725 ZBTB48P10074 688 aaPredicted RBP17.75■□□□□ 0.43
SNHG1-213ENST00000540725 IREB2P48200 963 aaKnown RBP17.75■□□□□ 0.43
SNHG1-213ENST00000540725 PKN2Q16513 984 aaKnown RBP17.75■□□□□ 0.43
SNHG1-213ENST00000540725 DZIP1LQ8IYY4 767 aaKnown RBP17.75■□□□□ 0.43
SNHG1-213ENST00000540725 VGLL2Q8N8G2 317 aa17.75■□□□□ 0.43
SNHG1-213ENST00000540725 KLHDC4Q8TBB5 520 aa17.75■□□□□ 0.43
SNHG1-213ENST00000540725 USP44Q9H0E7 712 aa17.75■□□□□ 0.43
SNHG1-213ENST00000540725 R3HDMLQ9H3Y0 253 aa17.75■□□□□ 0.43
SNHG1-213ENST00000540725 TDRD3Q9H7E2 651 aaKnown RBP17.75■□□□□ 0.43
SNHG1-213ENST00000540725 USP2O75604 605 aaPredicted RBP17.74■□□□□ 0.43
SNHG1-213ENST00000540725 PDE8BO95263 885 aa17.74■□□□□ 0.43
SNHG1-213ENST00000540725 ALDH1A1P00352 501 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms