RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 RRP9O43818 475 aaKnown RBP19.04■□□□□ 0.64
SCARB1-205ENST00000538291 RBM28Q9NW13 759 aaKnown RBP19.04■□□□□ 0.64
SCARB1-205ENST00000538291 ZBTB21Q9ULJ3 1066 aa19.04■□□□□ 0.64
SCARB1-205ENST00000538291 ZRANB1Q9UGI0 708 aa19.04■□□□□ 0.64
SCARB1-205ENST00000538291 F13A1P00488 732 aa19.03■□□□□ 0.64
SCARB1-205ENST00000538291 PARP1P09874 1014 aaKnown RBP19.03■□□□□ 0.64
SCARB1-205ENST00000538291 GJC1P36383 396 aa19.03■□□□□ 0.64
SCARB1-205ENST00000538291 PAXBP1Q9Y5B6 917 aa19.03■□□□□ 0.64
SCARB1-205ENST00000538291 ZSCAN23Q3MJ62 389 aa19.03■□□□□ 0.64
SCARB1-205ENST00000538291 DTHD1Q6ZMT9 781 aa19.03■□□□□ 0.64
SCARB1-205ENST00000538291 FAM200AQ8TCP9 573 aa19.03■□□□□ 0.64
SCARB1-205ENST00000538291 BIN2Q9UBW5 565 aaPredicted RBP19.03■□□□□ 0.64
SCARB1-205ENST00000538291 RTL1A6NKG5 1358 aa19.03■□□□□ 0.64
SCARB1-205ENST00000538291 PARP10Q53GL7 1025 aa19.03■□□□□ 0.64
SCARB1-205ENST00000538291 DACT1Q9NYF0 836 aa19.03■□□□□ 0.64
SCARB1-205ENST00000538291 CTAGE15A4D2H0 777 aa19.03■□□□□ 0.64
SCARB1-205ENST00000538291 RNMTO43148 476 aaKnown RBP19.03■□□□□ 0.64
SCARB1-205ENST00000538291 CTAGE8P0CG41 777 aa19.03■□□□□ 0.64
SCARB1-205ENST00000538291 CTAGE6Q86UF2 777 aa19.03■□□□□ 0.64
SCARB1-205ENST00000538291 CTAGE4Q8IX94 777 aa19.03■□□□□ 0.64
SCARB1-205ENST00000538291 ASXL2Q76L83 1435 aa19.02■□□□□ 0.64
SCARB1-205ENST00000538291 MCM7P33993 719 aa19.02■□□□□ 0.64
SCARB1-205ENST00000538291 TEX11Q8IYF3 940 aa19.02■□□□□ 0.64
SCARB1-205ENST00000538291 GIMAP7Q8NHV1 300 aa19.02■□□□□ 0.64
SCARB1-205ENST00000538291 BTG4Q9NY30 223 aa19.02■□□□□ 0.64
SCARB1-205ENST00000538291 NPATQ14207 1427 aa19.02■□□□□ 0.64
SCARB1-205ENST00000538291 KRT83P78385 493 aa19.02■□□□□ 0.64
SCARB1-205ENST00000538291 LMTK3Q96Q04 1460 aa19.02■□□□□ 0.64
SCARB1-205ENST00000538291 DHX32Q7L7V1 743 aaKnown RBP19.02■□□□□ 0.64
SCARB1-205ENST00000538291 GJA3Q9Y6H8 435 aa19.02■□□□□ 0.64
SCARB1-205ENST00000538291 ECM2O94769 699 aaPredicted RBP19.02■□□□□ 0.63
SCARB1-205ENST00000538291 PTGS1P23219 599 aa19.02■□□□□ 0.63
SCARB1-205ENST00000538291 ARID5AQ03989 594 aa19.02■□□□□ 0.63
SCARB1-205ENST00000538291 GSTA5Q7RTV2 222 aa19.02■□□□□ 0.63
SCARB1-205ENST00000538291 USP48Q86UV5 1035 aa19.02■□□□□ 0.63
SCARB1-205ENST00000538291 EYA1Q99502 592 aa19.02■□□□□ 0.63
SCARB1-205ENST00000538291 RAD50Q92878 1312 aa19.02■□□□□ 0.63
SCARB1-205ENST00000538291 PLCB3Q01970 1234 aa19.02■□□□□ 0.63
SCARB1-205ENST00000538291 SP4Q02446 784 aa19.02■□□□□ 0.63
SCARB1-205ENST00000538291 AOPEPQ8N6M6 819 aa19.02■□□□□ 0.63
SCARB1-205ENST00000538291 PUS7Q96PZ0 661 aaKnown RBP19.02■□□□□ 0.63
SCARB1-205ENST00000538291 JAG2Q9Y219 1238 aa19.02■□□□□ 0.63
SCARB1-205ENST00000538291 PCDHB15Q9Y5E8 787 aa19.02■□□□□ 0.63
SCARB1-205ENST00000538291 SOS1Q07889 1333 aaPredicted RBP19.02■□□□□ 0.63
SCARB1-205ENST00000538291 DUOX2Q9NRD8 1548 aa19.01■□□□□ 0.63
SCARB1-205ENST00000538291 NEK11Q8NG66 645 aa19.01■□□□□ 0.63
SCARB1-205ENST00000538291 CCNL1Q9UK58 526 aaPredicted RBP19.01■□□□□ 0.63
SCARB1-205ENST00000538291 GPATCH8Q9UKJ3 1502 aaKnown RBP19.01■□□□□ 0.63
SCARB1-205ENST00000538291 CBX1P83916 185 aa19.01■□□□□ 0.63
SCARB1-205ENST00000538291 APOBRQ0VD83 1088 aa19.01■□□□□ 0.63
SCARB1-205ENST00000538291 UFL1O94874 794 aa19.01■□□□□ 0.63
SCARB1-205ENST00000538291 HSPA2P54652 639 aa19.01■□□□□ 0.63
SCARB1-205ENST00000538291 IP6K1Q92551 441 aa19.01■□□□□ 0.63
SCARB1-205ENST00000538291 CREB3L3Q68CJ9 461 aa19.01■□□□□ 0.63
SCARB1-205ENST00000538291 CHST3Q7LGC8 479 aa19.01■□□□□ 0.63
SCARB1-205ENST00000538291 BRAPQ7Z569 592 aa19.01■□□□□ 0.63
SCARB1-205ENST00000538291 PICK1Q9NRD5 415 aa19.01■□□□□ 0.63
SCARB1-205ENST00000538291 KIF5AQ12840 1032 aa19■□□□□ 0.63
SCARB1-205ENST00000538291 CCDC42Q96M95 316 aa19■□□□□ 0.63
SCARB1-205ENST00000538291 TRPM2O94759 1503 aa19■□□□□ 0.63
SCARB1-205ENST00000538291 ZNF518AQ6AHZ1 1483 aa19■□□□□ 0.63
SCARB1-205ENST00000538291 NUP160Q12769 1436 aa19■□□□□ 0.63
SCARB1-205ENST00000538291 SKILP12757 684 aa19■□□□□ 0.63
SCARB1-205ENST00000538291 CCDC117Q8IWD4 279 aaPredicted RBP19■□□□□ 0.63
SCARB1-205ENST00000538291 NCKAP5LQ9HCH0 1330 aa19■□□□□ 0.63
SCARB1-205ENST00000538291 RPL13P26373 211 aaKnown RBP19■□□□□ 0.63
SCARB1-205ENST00000538291 DDX21Q9NR30 783 aaKnown RBP eCLIP19■□□□□ 0.63
SCARB1-205ENST00000538291 NDC80O14777 642 aa19■□□□□ 0.63
SCARB1-205ENST00000538291 MBD4O95243 580 aa19■□□□□ 0.63
SCARB1-205ENST00000538291 DNM1Q05193 864 aaKnown RBP19■□□□□ 0.63
SCARB1-205ENST00000538291 RAB3GAP1Q15042 981 aa19■□□□□ 0.63
SCARB1-205ENST00000538291 RAB3IL1Q8TBN0 382 aa19■□□□□ 0.63
SCARB1-205ENST00000538291 TMOD4Q9NZQ9 345 aa19■□□□□ 0.63
SCARB1-205ENST00000538291 HOXC9P31274 260 aa18.99■□□□□ 0.63
SCARB1-205ENST00000538291 CEP85Q6P2H3 762 aa18.99■□□□□ 0.63
SCARB1-205ENST00000538291 IQUBQ8NA54 791 aa18.99■□□□□ 0.63
SCARB1-205ENST00000538291 KRT86O43790 486 aa18.99■□□□□ 0.63
SCARB1-205ENST00000538291 BMS1Q14692 1282 aaKnown RBP18.99■□□□□ 0.63
SCARB1-205ENST00000538291 CCDC50Q8IVM0 306 aa18.99■□□□□ 0.63
SCARB1-205ENST00000538291 RNF216Q9NWF9 866 aaPredicted RBP18.99■□□□□ 0.63
SCARB1-205ENST00000538291 DNAJC5BQ9UF47 199 aa18.99■□□□□ 0.63
SCARB1-205ENST00000538291 PTPDC1A2A3K4 754 aa18.99■□□□□ 0.63
SCARB1-205ENST00000538291 TMEM110-MUSTN1A8MSY1 372 aa18.99■□□□□ 0.63
SCARB1-205ENST00000538291 BRDTQ58F21 947 aaPredicted RBP18.99■□□□□ 0.63
SCARB1-205ENST00000538291 AKNAD1Q5T1N1 836 aa18.99■□□□□ 0.63
SCARB1-205ENST00000538291 SH3TC1Q8TE82 1336 aa18.99■□□□□ 0.63
SCARB1-205ENST00000538291 PLCD3Q8N3E9 789 aa18.99■□□□□ 0.63
SCARB1-205ENST00000538291 BICC1Q9H694 974 aaKnown RBP18.99■□□□□ 0.63
SCARB1-205ENST00000538291 DCTPP1Q9H773 170 aa18.99■□□□□ 0.63
SCARB1-205ENST00000538291 HIBADHP31937 336 aaKnown RBP18.98■□□□□ 0.63
SCARB1-205ENST00000538291 DNAJC25Q9H1X3 360 aa18.98■□□□□ 0.63
SCARB1-205ENST00000538291 ZNF608Q9ULD9 1512 aaPredicted RBP18.98■□□□□ 0.63
SCARB1-205ENST00000538291 FMNL3Q8IVF7 1028 aa18.98■□□□□ 0.63
SCARB1-205ENST00000538291 HELLSQ9NRZ9 838 aa18.98■□□□□ 0.63
SCARB1-205ENST00000538291 POLR3AO14802 1390 aaPredicted RBP18.98■□□□□ 0.63
SCARB1-205ENST00000538291 MAST3O60307 1309 aa18.98■□□□□ 0.63
SCARB1-205ENST00000538291 ARHGEF10LQ9HCE6 1279 aa18.98■□□□□ 0.63
SCARB1-205ENST00000538291 FBF1Q8TES7 1133 aa18.98■□□□□ 0.63
SCARB1-205ENST00000538291 VAMP4O75379 141 aa18.97■□□□□ 0.63
SCARB1-205ENST00000538291 KIAA1524Q8TCG1 905 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms